SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.06G117600

Feature Type:gene_model
Chromosome:Gm06
Start:9534835
stop:9538832
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.06G117600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G20240.1AT PI JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
K09264KEGG Transcription factors JGI N/AIEA
KOG0014 KOG MADS box transcription factor JGI N/AIEA
PTHR11945PantherFam MADS BOX PROTEIN JGI N/AIEA
PF00319Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) JGI N/AIEA
PF01486Pfam K-box region JGI N/AIEA

Gene model name correspondences to Glyma.06G117600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma.06g117600 Wm82.a4.v1ISS As supplied by JGI
Glyma06g12380 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.06G117600
>Glyma.06g117600.1 sequence-type=CDS polypeptide=Glyma.06g117600.1.p locus=Glyma.06g117600 id=Glyma.06g117600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGAGGGGTAAGATTGAGATCAAAAGGATTGAGAACTCAAGCAACAGGCAAGTTACCTACTCAAAGAGGAAGAATGGGATCCTCAAGAAGGCAAAGGAAATTAGTGTTCTATGTGATGCTCAAGTTTCCCTTATCATCTTTGGTGTCTCCGGGAAGATGCATGAATACATCAGCCCCTACACCACGTTGATTGACGTTCTGGACAGATACCAAAGAGCTTCTGGGAAGACCCTCTGGGATGCTAAGCATGAGAACCTCAGCAATGAAATTGATAGACTCAAGAAAGAGAATGACAGCATGCAAATTGAGCTCAGGCACTTGAAAGGGGAGGACATCACGTCACTCAATTACAAGGAACTGATGGCACTAGAGGATGCCCTTGAAAATGGCCTCAGTGGAGTCCGTGAGAAAAAGATGGAAGTGCACAGGATGTTCAAGAGAAATGGCAAGATTTTGGAGGAGCAAAATAAGGAACTCAGTTTCCTTCTGCAACAGCATTTGGCAGTAGAAGGAATTGGAAACATGCATGAACAATGGATTTGA
Predicted protein sequences of Glyma.06G117600
>Glyma.06g117600.1.p sequence-type=predicted peptide transcript=Glyma.06g117600.1 locus=Glyma.06g117600 id=Glyma.06g117600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGVSGKMHEYISPYTTLIDVLDRYQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLKGEDITSLNYKELMALEDALENGLSGVREKKMEVHRMFKRNGKILEEQNKELSFLLQQHLAVEGIGNMHEQWI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo