SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research



Report for Sequence Feature Glyma.05g248900

Feature Type:gene_model
Chromosome:Gm05
Start:42243404
stop:42254794
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G17850.2AT JGI N/AIEA
KOG1530 KOG Rhodanese-related sulfurtransferase JGI N/AIEA
PTHR22778PantherFam OVARIAN CANCER GENE-2 PROTEIN-RELATED JGI N/AIEA
PF00581Pfam Rhodanese-like domain JGI N/AIEA
PF12368Pfam Rhodanase C-terminal JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma05g33510 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.05g248900.1 sequence-type=CDS polypeptide=Glyma.05g248900.1.p locus=Glyma.05g248900 id=Glyma.05g248900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGGTGGTGCAGCCAGGTCTTCTCTGTGTCTGGGTCCGGTGCACATGCACATGCACTCGCTCTCGCTCCTATAGTTACTGCTTCTTTTTCCAACACAAGTCTTGTGTTGCAATTCCAAAAGCCTCTCTTCAAATTCAGCAACTCCTCTTCTCTCGCTCTTACCCATCGTAAGCTGTTACCCTCTGCACTGCCACTAACGCAGCCCTCAAGTTCAAGGGAGGATTTTGATTTCGTGGTCGTCAATTTCTACCACTTTGTATTCATCCAAGACCCACAAGCTGAAGTCGACAAACACCGTTCTTTCTTGCAATTGGAGGGTCTTGACATCAATGGAAGATTATATTTGAATGAACAAGGTATTAATGCGCAGTATAGCGGGCCATCAAAAGATGCTATGACGTATGTCAACTGGTTAAGAAAGGATAACAGGTTTTCTGACATCTTGGTTCAGATATCTCCATCAGAAAAGGGACATACCTTTCCAACATTGAAGTTGCGTTATAAGCCTTCATTAGTACAGTTTGAAGGTGGTATGTCACATCTTTCATTGCTTGATCCTTCAATGCGGGCAATACCTTTATCACCTTCAGAATGGAGAGATAGATTGGAATCAATCAATAAAACTGATCTTACAGCAAAAGATAACTCAAACAGAAATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCGTGGGGCTCAGCGACCTAGTGTGGACTGCTTTAGGAACACTTCATTTGGTCTGTCTCGGGAAGAGATCACTGCTTCAGATCCTTTATCAAATGTAGATAAAGAAAAAGCAAACATATTGATGTATTGCACTGGAGGGATTCGCTGTGATGTATATTCTTCAATACTAAGGCAGCAGGGATTTCAGAATTTGTATACTCTGAAGGGAGGTGTTTCTCACTATCTAAAGAATGAAGGCCCTGCCGAATGGGTAGGAAATTTATTTGTATTTGACTCCCGTCTATCTCTCCCTCCTTCTATTTACTATACCGGGGCCACAACTGAAGCAGAGTCAACTCCAGTTTCTGGAGATGATAATTTTGCAAAATGCTACGTATGTAGTTTGGAAGTCAGTGAATTGAGACATAGGAACTGTGCAAATCTTGATTGTAATTTGCTTTTTCTATGCTGCGGACAATGTGCAGAGGATCTAAGAGGTTGTTGTTGTTTGACGTGCACTACTGCTCCTCGGCTTAGACCTGTTTTAAATGGAATGCAGAGATACAAAAAATGGCACTACTATCGGGATATGGATTTTCAAGGGAAAATGAAAATTTCAGCTTGA

>Glyma.05g248900.3 sequence-type=CDS polypeptide=Glyma.05g248900.3.p locus=Glyma.05g248900 id=Glyma.05g248900.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGGTGGTGCAGCCAGGTCTTCTCTGTGTCTGGGTCCGGTGCACATGCACATGCACTCGCTCTCGCTCCTATAGTTACTGCTTCTTTTTCCAACACAAGTCTTGTGTTGCAATTCCAAAAGCCTCTCTTCAAATTCAGCAACTCCTCTTCTCTCGCTCTTACCCATCGTAAGCTGTTACCCTCTGCACTGCCACTAACGCAGCCCTCAAGTTCAAGGGAGGATTTTGATTTCGTGGTCGTCAATTTCTACCACTTTGTATTCATCCAAGACCCACAAGCTGAAGTCGACAAACACCGTTCTTTCTTGCAATTGGAGTATAGCGGGCCATCAAAAGATGCTATGACGTATGTCAACTGGTTAAGAAAGGATAACAGGTTTTCTGACATCTTGGTTCAGATATCTCCATCAGAAAAGGGACATACCTTTCCAACATTGAAGTTGCGTTATAAGCCTTCATTAGTACAGTTTGAAGGTGGTATGTCACATCTTTCATTGCTTGATCCTTCAATGCGGGCAATACCTTTATCACCTTCAGAATGGAGAGATAGATTGGAATCAATCAATAAAACTGATCTTACAGCAAAAGATAACTCAAACAGAAATTACATTCTATTGGATGTGAGAAATGGTTATGAGTGGGATATTGGACATTTTCGTGGGGCTCAGCGACCTAGTGTGGACTGCTTTAGGAACACTTCATTTGGTCTGTCTCGGGAAGAGATCACTGCTTCAGATCCTTTATCAAATGTAGATAAAGAAAAAGCAAACATATTGATGTATTGCACTGGAGGGATTCGCTGTGATGTATATTCTTCAATACTAAGGCAGCAGGGATTTCAGAATTTGTATACTCTGAAGGGAGGTGTTTCTCACTATCTAAAGAATGAAGGCCCTGCCGAATGGGTAGGAAATTTATTTGTATTTGACTCCCGTCTATCTCTCCCTCCTTCTATTTACTATACCGGGGCCACAACTGAAGCAGAGTCAACTCCAGTTTCTGGAGATGATAATTTTGCAAAATGCTACGTATGTAGTTTGGAAGTCAGTGAATTGAGACATAGGAACTGTGCAAATCTTGATTGTAATTTGCTTTTTCTATGCTGCGGACAATGTGCAGAGGATCTAAGAGGTTGTTGTTGTTTGACGTGCACTACTGCTCCTCGGCTTAGACCTGTTTTAAATGGAATGCAGAGATACAAAAAATGGCACTACTATCGGGATATGGATTTTCAAGGGAAAATGAAAATTTCAGCTTGA

>Glyma.05g248900.1.p sequence-type=predicted peptide transcript=Glyma.05g248900.1 locus=Glyma.05g248900 id=Glyma.05g248900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRWCSQVFSVSGSGAHAHALALAPIVTASFSNTSLVLQFQKPLFKFSNSSSLALTHRKLLPSALPLTQPSSSREDFDFVVVNFYHFVFIQDPQAEVDKHRSFLQLEGLDINGRLYLNEQGINAQYSGPSKDAMTYVNWLRKDNRFSDILVQISPSEKGHTFPTLKLRYKPSLVQFEGGMSHLSLLDPSMRAIPLSPSEWRDRLESINKTDLTAKDNSNRNYILLDVRNGYEWDIGHFRGAQRPSVDCFRNTSFGLSREEITASDPLSNVDKEKANILMYCTGGIRCDVYSSILRQQGFQNLYTLKGGVSHYLKNEGPAEWVGNLFVFDSRLSLPPSIYYTGATTEAESTPVSGDDNFAKCYVCSLEVSELRHRNCANLDCNLLFLCCGQCAEDLRGCCCLTCTTAPRLRPVLNGMQRYKKWHYYRDMDFQGKMKISA*

>Glyma.05g248900.3.p sequence-type=predicted peptide transcript=Glyma.05g248900.3 locus=Glyma.05g248900 id=Glyma.05g248900.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRWCSQVFSVSGSGAHAHALALAPIVTASFSNTSLVLQFQKPLFKFSNSSSLALTHRKLLPSALPLTQPSSSREDFDFVVVNFYHFVFIQDPQAEVDKHRSFLQLEYSGPSKDAMTYVNWLRKDNRFSDILVQISPSEKGHTFPTLKLRYKPSLVQFEGGMSHLSLLDPSMRAIPLSPSEWRDRLESINKTDLTAKDNSNRNYILLDVRNGYEWDIGHFRGAQRPSVDCFRNTSFGLSREEITASDPLSNVDKEKANILMYCTGGIRCDVYSSILRQQGFQNLYTLKGGVSHYLKNEGPAEWVGNLFVFDSRLSLPPSIYYTGATTEAESTPVSGDDNFAKCYVCSLEVSELRHRNCANLDCNLLFLCCGQCAEDLRGCCCLTCTTAPRLRPVLNGMQRYKKWHYYRDMDFQGKMKISA*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo