SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research



Report for Sequence Feature Glyma.05g248800

Feature Type:gene_model
Chromosome:Gm05
Start:42236181
stop:42239668
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G73360.1AT ATHDG11,EDT1,HDG11 JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0008289GO-mf lipid binding JGI N/AIEA
K09338KEGG Transcription factors JGI N/AIEA
KOG0484 KOG Transcription factor PHOX2/ARIX, contains HOX domain JGI N/AIEA
PTHR24326PantherFam HOMEOBOX-LEUCINE ZIPPER PROTEIN JGI N/AIEA
PF00046Pfam Homeodomain JGI N/AIEA
PF01852Pfam START domain JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma05g33520 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.05g248800.1 sequence-type=CDS polypeptide=Glyma.05g248800.1.p locus=Glyma.05g248800 id=Glyma.05g248800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGTACGGTGGGTCGCAGTCCCCAGGGGAGCAAGATGGTTCGGATTCCCAAGAGAGGAGGAAACGCTATCATCGTCATACTGCCAATCAGATTCAGAGGCTTGAGTCAATGTTCAAAGAGTGCCCCCATCCAGATGAGAAACAAAGGTTGCAATTAAGCAGGGAGTTAGGCCTGGCCCCGAGGCAGATTAAGTTCTGGTTCCAAAATAGGAGGACCCAAATGAAGGCCCAACACGAAAGAGCTGACAATTGTGCTCTTCGAGCTGACAATGACAAGATACGTTGCGAGAACATAGCCATCAGGGAGGCCTTGAAGAACGTTATCTGCCCTTCTTGTGGTGGCCCACCTCTCAATGACGATTCTTATTTTAATGACCATAAGTTGCGATTAGAGAATGCCCACCTCAAAGAAGAGCTTGATAGAGTGTCTAGCATTGCTGCCAAGTACATTGGAAGACCAATTTCCCAACTCCCGCCGGTCCAGCCTATTCATATATCGTCTCTGGACTTATCAATGGCGAGTTTTGGAAACCAAGGGATGGTTGGTCCGGCTCCTGCTCCTTCCCTTAATCTTGATCTTCTTCCTGCTGGGACTTCCTCATCCATGCCAAATTTGCCTTATCAGCCTCCTTGCCTTTCGGACATGGACAAGTCTCTCATGTCAGACATTGCCTCCAATGCCATGGAAGAATTTCTCAGGCTCGTGCAGACAAATGAACCCTTGTGGCTTAAATCAAACGTCGACCGTAGAGATGTTCTTAGTTCTGATGCCTATGATAGAATGTTCTCCAAGCCCAATACTCGCTCCAAGAATCCTAATGTTCGAATTGAAGCATCCCGAGATTCTGGAGTCGTATTACTGAATAGTTTAGCTTTGGTTGATATGTTTATGGACCCAAACAAATGGATCCAACTTTTTCCCACAATTGTCTCAGTGGCAAGGACTATTCAAGTCATATCTTCTGGGGTCATGGGCAGTTGCAGTGGTTCTTTACAATTGATGTATCAAGAGTTGCAAGTGCTTTCTCCACTTGTTTCAACTCGGGAGTTTTACTTCCTGCGTTACTGTCAGCAAATTGAGCAGGGCACATGGGCAGTAATGGACGTTTCTTATGATTTTCCCCAAGATAGCCACTTTGCTCCTCAGTTTCGGTCTCATCGTTGTCCTTCTGGTTGCTTGATCCAGGACATGCCTGATGGGCATTCCAAGATTACTTGGATTGAACACGTAGAGATTGAAGATAAAACTCTTCCTCATCGGCTTTATAGAAATCTTATTTATAGTGGGATGGCATTTGGAGCTGAAAGATGGCTTACTACCCTCCAGAGGATGTGTGAAAGATTTACTTATCTGATGGCTACAAGCAATCCTACCCGGGATAATCTTGGAGGAGTAATTTCATCTCCTGAGGGCAAGAGGAGCATGATGAAACTTGCTCAAAGGATGGTCACCGATTTTTGTGCCAGCATTAGCACATCAAGTGGCCATCGATGGACCACGCTCTCTGGGTTGAATGAAATCGTAGTAAGAGTCACTGTCCACAAAAGCTCAGATCCTGGACAACCTAATGGTGTGGTGCTAAGTGCAGCCACTACCATTTGGCTCCCCACCCCTCCACACACTGTCTTTAATTTCTTCAAGGATGAAAACAAAAGACCTCAGTGGGATGTTCTTTCCAACGGTAATGCCGTTCAAGAGGTTGCCAACATAGCAAATGGTTTGCACCCTGGTAACTGTATATCAGTTCTTCGAGCTTTCAACAACAGTCAGAACATGTTAATACTACAAGAAAGCTGCATAGATTCCTATGGTTCACTTGTGGTTTATTGCCCAGTTGATCTGCCATCCATCAACACAGCAGTAAGTGGTGAAGACCCTTCATACATTCCCCTACTACCAAATGGATTTACCATTTTGCCTGATGGTCAGCCTGACCAGGAAGGAGATGGAGCATCAACTAGCTCAAACACAAACAGGAATATAGCAAGGTCTGGTGGTTCACTAGTTACAATTGCATTCCAAATTCTAGTGAGCAGCTTGCCATCTGCTAAGGTCAATATGGAGTCGGTGACAACTGTTAACAATCTTATTGGCTCCACTGTCCAGCAAATAAAGTCTTCCCTAAGTTGTCCTACCTAG

>Glyma.05g248800.1.p sequence-type=predicted peptide transcript=Glyma.05g248800.1 locus=Glyma.05g248800 id=Glyma.05g248800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEYGGSQSPGEQDGSDSQERRKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQHERADNCALRADNDKIRCENIAIREALKNVICPSCGGPPLNDDSYFNDHKLRLENAHLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMASFGNQGMVGPAPAPSLNLDLLPAGTSSSMPNLPYQPPCLSDMDKSLMSDIASNAMEEFLRLVQTNEPLWLKSNVDRRDVLSSDAYDRMFSKPNTRSKNPNVRIEASRDSGVVLLNSLALVDMFMDPNKWIQLFPTIVSVARTIQVISSGVMGSCSGSLQLMYQELQVLSPLVSTREFYFLRYCQQIEQGTWAVMDVSYDFPQDSHFAPQFRSHRCPSGCLIQDMPDGHSKITWIEHVEIEDKTLPHRLYRNLIYSGMAFGAERWLTTLQRMCERFTYLMATSNPTRDNLGGVISSPEGKRSMMKLAQRMVTDFCASISTSSGHRWTTLSGLNEIVVRVTVHKSSDPGQPNGVVLSAATTIWLPTPPHTVFNFFKDENKRPQWDVLSNGNAVQEVANIANGLHPGNCISVLRAFNNSQNMLILQESCIDSYGSLVVYCPVDLPSINTAVSGEDPSYIPLLPNGFTILPDGQPDQEGDGASTSSNTNRNIARSGGSLVTIAFQILVSSLPSAKVNMESVTTVNNLIGSTVQQIKSSLSCPT*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo