SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g245000

Feature Type:gene_model
Chromosome:Gm05
Start:41952124
stop:41956145
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g245000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G18180.1AT JGI N/AIEA
1.3.99.5EC 3-oxo-5alpha-steroid 4-dehydrogenase (acceptor) JGI N/AIEA
KOG4650 KOG Predicted steroid reductase JGI N/AIEA
PTHR32251PantherFam 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE JGI N/AIEA
PTHR32251:SF15PantherFam S5A_REDUCTASE DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF06966Pfam Protein of unknown function (DUF1295) JGI N/AIEA

Gene model name correspondences to Glyma.05g245000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g33940 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g245000
>Glyma.05g245000.1 sequence-type=CDS polypeptide=Glyma.05g245000.1.p locus=Glyma.05g245000 id=Glyma.05g245000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGCACCATCATCGACTCCCATTTCTTGGCCTTCACTGCCCTTGTCACTATTGCCTATCAGTTTTTGTTTTTCGTCGTCACTGCGCTCCTCAAATTCGACAAAGTCACTGATTTTGCTGGAAGTACGAATTTCATTATAATTGCTGCATTGACCCTGGTCATCAAAGGCTCCTGGTATTTTCGACAGATAATCCTCACTTTGTTTGTTGGGATATGGGGAATTCGCCTCGGCCTTTTCCTCCTATTCAGAATTTTGCAGTGGGGAGAGGACCGACGCTTTGATGAAATGCGCAGTAATTTGGGTAGACTGGCCATATTTTGGATATTTCAGGCTGTCTGGGTGTGGGCTGTGAGTTTACCTGTTACAGTGGTTAATGCAAGCGACAGAAATCCCTTCCTACAGGTTGTTGATATAGTAGGGTGGATTTTGTGGGCTGTGGGTTTTATTGTGGAAGGTACAGCAGATCAACAAAAGCTGCATTTCAAAAGATCTTCAGAAAATAGAGGGAAGTGGTGTAATGTTGGACTTTGGAAATATTCTCGTCATCCTAACTATTTTGGTGAAATATTGCTTTGGTGGGGAATTTTTGTGGCATCTACACCTGTACTGAAGGGTGCTGAATGGCTGGTGATCATTGGACCAATCTTTCTCACATTATTGCTTCTTTTTGTCAGTGGCATTCCACTTCTTGAGGATTCAGCGGATAAAAAGTTTGGCAATGTAGATGGATATAGGATATACAAAAAGAGAACCAGCCCTTTAATCCCGTTGCCACGATCAATCTATGGGAACTTATCCGCATGGTTCAAAACAACTTTTCTCTTCGAGTTTCCATTCTACAGTCGTAATCTACCACAAGAAGAGAACTGGTGCAGTGCAAACAGTGGGAAAATCAGTGATGCTCTGAAAATTGGCTAG

>Glyma.05g245000.2 sequence-type=CDS polypeptide=Glyma.05g245000.2.p locus=Glyma.05g245000 id=Glyma.05g245000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGCACCATCATCGACTCCCATTTCTTGGCCTTCACTGCCCTTGTCACTATTGCCTATCAGTTTTTGTTTTTCGTCGTCACTGCGCTCCTCAAATTCGACAAAGTCACTGATTTTGCTGGAAGTACGAATTTCATTATAATTGCTGCATTGACCCTGGTCATCAAAGGCTCCTGGTATTTTCGACAGATAATCCTCACTTTGTTTGTTGGGATATGGGGAATTCGCCTCGGCCTTTTCCTCCTATTCAGAATTTTGCAGTGGGGAGAGGACCGACGCTTTGATGAAATGCGCAGTAATTTGGGTAGACTGGCCATATTTTGGATATTTCAGGCTGTCTGGGTGTGGGCTGTGAGTTTACCTGTTACAGTGGTTAATGCAAGCGACAGAAATCCCTTCCTACAGGTTGTTGATATAGTAGGGTGGATTTTGTGGGCTGTGGGTTTTATTGTGGAAGGTACAGCAGATCAACAAAAGCTGCATTTCAAAAGATCTTCAGAAAATAGAGGGAAGTGGTGTAATGTTGGACTTTGGAAATATTCTCGTCATCCTAACTATTTTGGTGAAATATTGCTTTGGTGGGGAATTTTTGTGGCATCTACACCTGTACTGAAGGGTGCTGAATGGCTGGTGATCATTGGACCAATCTTTCTCACATTATTGCTTCTTTTTGTCAGTGGCATTCCACTTCTTGAGGATTCAGCGGATAAAAAGTTTGGCAATGTAGATGGATATAGGATATACAAAAAGAGAACCAGCCCTTTAATCCCGTTGCCACGATCAATCTATGGGAACTTATCCGCATGGTTCAAAACAACTTTTCTCTTCGAGTTTCCATTCTACAGTCGTAATCTACCACAAGAAGAGAACTGTGCAAACAGTGGGAAAATCAGTGATGCTCTGAAAATTGGCTAG

>Glyma.05g245000.3 sequence-type=CDS polypeptide=Glyma.05g245000.3.p locus=Glyma.05g245000 id=Glyma.05g245000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGCACCATCATCGACTCCCATTTCTTGGCCTTCACTGCCCTTGTCACTATTGCCTATCAGTTTTTGTTTTTCGTCGTCACTGCGCTCCTCAAATTCGACAAAGTCACTGATTTTGCTGGAAGTACGAATTTCATTATAATTGCTGCATTGACCCTGGTCATCAAAGGCTCCTGGTATTTTCGACAGATAATCCTCACTTTGTTTGTTGGGATATGGGGAATTCGCCTCGGCCTTTTCCTCCTATTCAGAATTTTGCAGTGGGGAGAGGACCGACGCTTTGATGAAATGCGCAGTAATTTGGGTAGACTGGCCATATTTTGGATATTTCAGGCTGTCTGGGTGTGGGCTGTGAGTTTACCTGTTACAGTGGTTAATGCAAGCGACAGAAATCCCTTCCTACAGGTTGTTGATATAGTAGGGTGGATTTTGTGGGCTGTGGGTTTTATTGTGGAAGGTACAGCAGATCAACAAAAGCTGCATTTCAAAAGATCTTCAGAAAATAGAGGGAAGTGGTGTAATGTTGGACTTTGGAAATATTCTCGTCATCCTAACTATTTTGGTGAAATATTGCTTTGGTGGGGAATTTTTGTGGCATCTACACCTGTACTGAAGGGTGCTGAATGGCTGGTGATCATTGGACCAATCTTTCTCACATTATTGCTTCTTTTTGTCAGTGGCATTCCACTTCTTGAGGATTCAGCGGATAAAAAGTTTGGCAATGTAGATGGATATAGGATATACAAAAAGAGAACCAGCCCTTTAATCCCGTTGCCACGATCAATCTATGGGAACTTATCCGCATGGTTCAAAACAACTTTTCTCTTCGAGTTTCCATTCTACAGTCGTAATCTACCACAAGAAGAGAACTGGTGA

>Glyma.05g245000.4 sequence-type=CDS polypeptide=Glyma.05g245000.4.p locus=Glyma.05g245000 id=Glyma.05g245000.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGCACCATCATCGACTCCCATTTCTTGGCCTTCACTGCCCTTGTCACTATTGCCTATCAGTTTTTGTTTTTCGTCGTCACTGCGCTCCTCAAATTCGACAAAGTCACTGATTTTGCTGGAAGTACGAATTTCATTATAATTGCTGCATTGACCCTGGTCATCAAAGGCTCCTGGTATTTTCGACAGATAATCCTCACTTTGTTTGTTGGGATATGGGGAATTCGCCTCGGCCTTTTCCTCCTATTCAGAATTTTGCAGTGGGGAGAGGACCGACGCTTTGATGAAATGCGCAGTAATTTGGGTAGACTGGCCATATTTTGGATATTTCAGGCTGTCTGGGTGTGGGCTGTGAGTTTACCTGTTACAGTGGTTAATGCAAGCGACAGAAATCCCTTCCTACAGGTTGTTGATATAGTAGGGTGGATTTTGTGGGCTGTGGGTTTTATTGTGGAAGGTACAGCAGATCAACAAAAGCTGCATTTCAAAAGATCTTCAGAAAATAGAGGGAAGTGGTGTAATGTTGGACTTTGGAAATATTCTCGTCATCCTAACTATTTTGGTGAAATATTGCTTTGGTGGGGAATTTTTGTGGCATCTACACCTGTACTGAAGGGTGCTGAATGGCTGGTGATCATTGGACCAATCTTTCTCACATTATTGCTTCTTTTTGTCAGTGGCATTCCACTTCTTGAGGATTCAGCGGATAAAAAGTTTGGCAATGTAGATGGATATAGGATATACAAAAAGAGAACCAGGTTAATTTACCTCCTCAATGTCATATATCTTTTCGGTCTCTGGTTAAGCAGAAATGTCTCTTCACCTAGTGCGATGAGTCGATTATTATTGTTTTGTCATTAA
Predicted protein sequences of Glyma.05g245000
>Glyma.05g245000.1.p sequence-type=predicted peptide transcript=Glyma.05g245000.1 locus=Glyma.05g245000 id=Glyma.05g245000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGTIIDSHFLAFTALVTIAYQFLFFVVTALLKFDKVTDFAGSTNFIIIAALTLVIKGSWYFRQIILTLFVGIWGIRLGLFLLFRILQWGEDRRFDEMRSNLGRLAIFWIFQAVWVWAVSLPVTVVNASDRNPFLQVVDIVGWILWAVGFIVEGTADQQKLHFKRSSENRGKWCNVGLWKYSRHPNYFGEILLWWGIFVASTPVLKGAEWLVIIGPIFLTLLLLFVSGIPLLEDSADKKFGNVDGYRIYKKRTSPLIPLPRSIYGNLSAWFKTTFLFEFPFYSRNLPQEENWCSANSGKISDALKIG*

>Glyma.05g245000.2.p sequence-type=predicted peptide transcript=Glyma.05g245000.2 locus=Glyma.05g245000 id=Glyma.05g245000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGTIIDSHFLAFTALVTIAYQFLFFVVTALLKFDKVTDFAGSTNFIIIAALTLVIKGSWYFRQIILTLFVGIWGIRLGLFLLFRILQWGEDRRFDEMRSNLGRLAIFWIFQAVWVWAVSLPVTVVNASDRNPFLQVVDIVGWILWAVGFIVEGTADQQKLHFKRSSENRGKWCNVGLWKYSRHPNYFGEILLWWGIFVASTPVLKGAEWLVIIGPIFLTLLLLFVSGIPLLEDSADKKFGNVDGYRIYKKRTSPLIPLPRSIYGNLSAWFKTTFLFEFPFYSRNLPQEENCANSGKISDALKIG*

>Glyma.05g245000.3.p sequence-type=predicted peptide transcript=Glyma.05g245000.3 locus=Glyma.05g245000 id=Glyma.05g245000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGTIIDSHFLAFTALVTIAYQFLFFVVTALLKFDKVTDFAGSTNFIIIAALTLVIKGSWYFRQIILTLFVGIWGIRLGLFLLFRILQWGEDRRFDEMRSNLGRLAIFWIFQAVWVWAVSLPVTVVNASDRNPFLQVVDIVGWILWAVGFIVEGTADQQKLHFKRSSENRGKWCNVGLWKYSRHPNYFGEILLWWGIFVASTPVLKGAEWLVIIGPIFLTLLLLFVSGIPLLEDSADKKFGNVDGYRIYKKRTSPLIPLPRSIYGNLSAWFKTTFLFEFPFYSRNLPQEENW*

>Glyma.05g245000.4.p sequence-type=predicted peptide transcript=Glyma.05g245000.4 locus=Glyma.05g245000 id=Glyma.05g245000.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGTIIDSHFLAFTALVTIAYQFLFFVVTALLKFDKVTDFAGSTNFIIIAALTLVIKGSWYFRQIILTLFVGIWGIRLGLFLLFRILQWGEDRRFDEMRSNLGRLAIFWIFQAVWVWAVSLPVTVVNASDRNPFLQVVDIVGWILWAVGFIVEGTADQQKLHFKRSSENRGKWCNVGLWKYSRHPNYFGEILLWWGIFVASTPVLKGAEWLVIIGPIFLTLLLLFVSGIPLLEDSADKKFGNVDGYRIYKKRTRLIYLLNVIYLFGLWLSRNVSSPSAMSRLLLFCH*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo