SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g244400

Feature Type:gene_model
Chromosome:Gm05
Start:41920687
stop:41923911
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g244400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G02750.1AT JGI N/AIEA
PTHR24015PantherFam OS07G0578800 PROTEIN-RELATED JGI N/AIEA
PTHR24015:SF424PantherFam OS09G0327200 PROTEIN JGI N/AIEA
PF01535Pfam PPR repeat JGI N/AIEA
PF12854Pfam PPR repeat JGI N/AIEA
PF13041Pfam PPR repeat family JGI N/AIEA
PF14432Pfam DYW family of nucleic acid deaminases JGI N/AIEA

Proteins Associated with Glyma.05g244400
LocusGene SymbolProtein Name
PPR47 Psudo-Response Regulator gene 47

Gene model name correspondences to Glyma.05g244400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g34000 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g244400
>Glyma.05g244400.1 sequence-type=CDS polypeptide=Glyma.05g244400.1.p locus=Glyma.05g244400 id=Glyma.05g244400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAACAGCTTCAATATAATGCAATTCAAGTATGTTGTGAGACACTTGCGTATGCGCAACTCACGTTGTCTGTGTACGAATAATTATTATAGGAGTAAGAGACGAAGCACGAACAGCTACTCTCCATCCTCTGTCAAATTCAAAGACCCTGACATTGTTACATGGAACAAAGCCATTTCTTCCCACATGCGCAACGGCCACTGCGACTCCGCTCTCCGTGTCTTCAACTCCATGCCTCGCCGGAGCTCTGTCTCCTACAACGCCATGATATCTGGGTACTTGAGGAACGCCAAGTTCTCCCTCGCAAGGGACCTGTTTGATAAAATGCCTGAGAGGGACTTGTTTTCCTGGAATGTTATGCTCACTGGATATGTCAGGAACCGCAGGCTCGGCGAGGCCCACAAGTTGTTTGATCTAATGCCCAAAAAGGATGTTGTTTCCTGGAATGCCATGTTGTCTGGGTATGCCCAGAATGGGTTTGTTGATGAGGCAAGGGAGGTTTTCAATAAGATGCCTCATAGGAATTCCATCTCCTGGAATGGGCTGCTTGCAGCTTATGTTCATAATGGGAGACTCAAGGAGGCACGTCGCTTGTTTGAGTCCCAATCAAACTGGGAATTGATTTCTTGGAATTGTTTGATGGGCGGGTATGTGAAGAGAAACATGTTGGGTGATGCTAGGCAGCTTTTTGACCGAATGCCTGTTAGGGATGTCATCTCCTGGAACACTATGATTTCCGGTTATGCCCAGGTTGGAGATTTGTCTCAAGCTAAGAGGTTGTTCAATGAATCTCCAATTCGGGATGTGTTCACATGGACAGCGATGGTGTCTGGATATGTGCAGAATGGAATGGTGGATGAAGCAAGAAAATATTTTGATGAAATGCCTGTTAAAAATGAAATTTCTTACAATGCAATGCTTGCGGGCTATGTGCAATACAAAAAAATGGTCATTGCAGGGGAGTTGTTTGAGGCAATGCCTTGTCGGAATATAAGTTCATGGAATACCATGATTACCGGCTATGGTCAGAATGGTGGTATAGCTCAAGCTAGGAAATTGTTTGATATGATGCCTCAGCGCGATTGTGTATCTTGGGCGGCTATTATTTCTGGTTATGCTCAGAATGGTCACTATGAAGAGGCTCTAAACATGTTTGTTGAGATGAAACGAGATGGGGAAAGTTCAAATAGGTCTACTTTTAGTTGTGCTTTGAGCACATGTGCCGATATTGCTGCCTTGGAGTTAGGGAAGCAAGTTCATGGGCAGGTGGTGAAGGCAGGATTTGAGACTGGGTGTTTTGTGGGAAATGCACTTCTTGGGATGTATTTTAAATGTGGCAGCACAGATGAGGCTAATGATGTGTTTGAAGGAATAGAGGAGAAAGATGTCGTCTCTTGGAACACAATGATTGCTGGTTATGCTAGGCATGGATTTGGCAGACAGGCTTTAGTTTTATTTGAGTCAATGAAGAAAGCAGGTGTTAAACCTGATGAGATTACAATGGTTGGTGTTCTGTCTGCTTGTAGTCACTCTGGCTTGATAGACAGGGGAACTGAATACTTTTATTCAATGGATAGGGATTACAATGTAAAACCAACTTCAAAACATTATACTTGCATGATTGATCTTCTTGGAAGAGCTGGCCGCCTGGAAGAAGCAGAGAATTTAATGAGAAACATGCCTTTTGACCCAGGTGCTGCATCATGGGGAGCTCTACTAGGTGCAAGCCGGATTCACGGCAATACTGAACTGGGTGAGAAGGCTGCTGAGATGGTTTTTAAGATGGAACCTCAGAACTCAGGGATGTATGTCCTTCTTTCAAATCTATATGCAGCTTCTGGCAGGTGGGTTGATGTTGGCAAGATGAGATCAAAAATGAGGGAAGCTGGTGTGCAGAAAGTAACTGGATATAGTTGGGTTGAGGTACAAAACAAGATTCATACATTCTCGGTTGGGGATTGTTTCCACCCAGAAAAGGATAGAATATATGCCTTCTTAGAAGAGCTAGATTTGAAAATGAGGCGTGAGGGGTATGTTTCTTCAACAAAACTGGTTTTGCATGATGTGGAAGAGGAAGAAAAGGAGCATATGCTCAAGTATCACAGTGAGAAATTAGCTGTAGCATTTGGAATTCTGACTATACCAGCTGGCAGACCAATACGCGTCATGAAAAACTTGCGTGTTTGTCAAGACTGTCATAATGCCATCAAACACATATCCAAGATTGTTGGAAGGTTGATAATCTTAAGGGATTCTCACCGCTTTCACCACTTCAGTGAGGGTATTTGTTCCTGTGGGGATTATTGGTAA
Predicted protein sequences of Glyma.05g244400
>Glyma.05g244400.1.p sequence-type=predicted peptide transcript=Glyma.05g244400.1 locus=Glyma.05g244400 id=Glyma.05g244400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MNSFNIMQFKYVVRHLRMRNSRCLCTNNYYRSKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo