SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g243900

Feature Type:gene_model
Chromosome:Gm05
Start:41880130
stop:41885412
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g243900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G18060.1AT JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR19856PantherFam WD-REPEATCONTAINING PROTEIN WDR1 JGI N/AIEA
PF00400Pfam WD domain, G-beta repeat JGI N/AIEA

Gene model name correspondences to Glyma.05g243900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g34060 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g243900
>Glyma.05g243900.1 sequence-type=CDS polypeptide=Glyma.05g243900.1.p locus=Glyma.05g243900 id=Glyma.05g243900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGCCACGAGCTGTTGGAGACGTACGCGTGCATGCCCACGACGGAGCGCGGCCGTGGGATTCTGATCTCCGGCGATGCCAAGTCCAACTCCATCGTCTACACCAACGGCAGATCGGTGGTCATGATGAACCTCCAGAACCCCCTAAACGTGTCCGTGTACGGGGACCACGCCTACCCCGCCACCGTGGCGCGCTTTTCCCCCAACGGCGAGTGGGTGGCCTCCGCCGACGCCTCCGGCTCCGTCAGGATCTGGGGCACGCGAAACGACTTCGTTTTGAAGAAGGAGTTTAGAGTCCTCTCCGCTCGCATCGACGACCTTCAGTGGTCCCCCGATGGTCTCAGAATCGTTGCCTGCGGCGAAGGCAAAGGGAAGTCCTTCGTCCGCGCTTTTATGTGGGATTCGGGGACTAATGTTGGTGAATTCGATGGTCACTCACGTCGGGTTTTGAGTTGTGCTTATAAACCCACGAGGCCTTTTCGCGTTGTCACTTGTGGAGAGGATTTTCTGCTTAACTTTTATGAGGGACCTCCCTTTAGATTTAAGCTGTCTCACAGGGATCATTCAAATTTTGTGAATTGTGTAAGATATTCTCCGGATGGCAGTAAATTTATAAGTGTAAGTTCTGACAAGAAGGGTATCATATTCGATGGAAACAGTGCAGAGAAGATTGGTGAGTTGTCTTCTGAAGGTGGGCATACTGGTAGTATTTATGCTGTTAGCTGGAGTCCTGATGGAAAGCTGGTGCTGACTGTATCTGCCGACAAGTCTGCAAAAGTATGGGACATTACTGAGGACAATAACGGAAAGGTGAAGAAAACATTGACTTGTCCTGGCACTGGTGGAGTTGAAGACATGCTAGTGGGGTGCCTATGGTTGAATGATTATCTTGTCACTGTTTCTCTTGGTGGGACAATATCTATATTTTTAGCAAGTGATCTTGATAAAGCCCCGACAGCATTTTCTGGACATATGAAAAATGTTTCCTCCTTAACTATTCTTAGAAGTAACCCTAGAGTGCTCTTATCTAGCAGTTATGATGGCTTAATAGTTAAGTGGATTCAAGGGATTGGATATAGTGAAAAACTACAAAGGAAGGAAAATTCTCAAATCAAATGCTTAGCAGCTGTAGAAGAAGAGATTGTTACATCTGGATTCGATAATAAGATAAGGCGAGTTTCTTTACATGGGGATCAGTGTGGAGATGCTGAAGCCATTGATATAGGAAGTCAACCAAAGGACTTGAGTGTTGCACTTCTTTCTCCTGAACTTGCCCTAGTTTCAATTGATTCAGGAGTTGTCATGTTGCGTGGTGCCAAAATTGTGTCAACCATTAATCTTGGGTTTATTGTGACAGCATCTGCTGTCTCACCTGATGGAAATGAAGCCATTATCGGTGGACAGGATGGTAAATTGCACATATATTCTATTTCTGGCGATACTCTTGTAGAAGAGGCTGTCCTTGAGAAACATAGGGGTGCTATTAGTGTCATACGTTATTCCCCAGACCTTTCAATGTTTGCATCAGGGGATGTCAATCGAGAAGCTATAGTGTGGGACCGTGCCTCCCGAGAGGTGAAGCTGAAGAACATGTTGTACCATACTGCTAGGATAAACTGCCTTGCGTGGTCCCCTGATAGCCTTAGGATTGCTACAGGATCACTTGACACATGTGTCATCATATATGAAGTTTATCAGCCTGCATCTAGTAGAATTACCATAAAGGGTGCTCATTTAGGCGGGGTTTATGGGTTAGCATTTACTGATGAGTATAGTTTGGTTAGCTCTGGTGAGGATGCTTTTATCCGTGTTTGGAGGATAACCCCTCGTTGA
Predicted protein sequences of Glyma.05g243900
>Glyma.05g243900.1.p sequence-type=predicted peptide transcript=Glyma.05g243900.1 locus=Glyma.05g243900 id=Glyma.05g243900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSHELLETYACMPTTERGRGILISGDAKSNSIVYTNGRSVVMMNLQNPLNVSVYGDHAYPATVARFSPNGEWVASADASGSVRIWGTRNDFVLKKEFRVLSARIDDLQWSPDGLRIVACGEGKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAYKPTRPFRVVTCGEDFLLNFYEGPPFRFKLSHRDHSNFVNCVRYSPDGSKFISVSSDKKGIIFDGNSAEKIGELSSEGGHTGSIYAVSWSPDGKLVLTVSADKSAKVWDITEDNNGKVKKTLTCPGTGGVEDMLVGCLWLNDYLVTVSLGGTISIFLASDLDKAPTAFSGHMKNVSSLTILRSNPRVLLSSSYDGLIVKWIQGIGYSEKLQRKENSQIKCLAAVEEEIVTSGFDNKIRRVSLHGDQCGDAEAIDIGSQPKDLSVALLSPELALVSIDSGVVMLRGAKIVSTINLGFIVTASAVSPDGNEAIIGGQDGKLHIYSISGDTLVEEAVLEKHRGAISVIRYSPDLSMFASGDVNREAIVWDRASREVKLKNMLYHTARINCLAWSPDSLRIATGSLDTCVIIYEVYQPASSRITIKGAHLGGVYGLAFTDEYSLVSSGEDAFIRVWRITPR*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo