SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g240200

Feature Type:gene_model
Chromosome:Gm05
Start:41584193
stop:41592273
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g240200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G14780.1AT JGI N/AIEA
PTHR33199PantherFam MACPF DOMAIN-CONTAINING PROTEIN CAD1 JGI N/AIEA
PTHR33199:SF4PantherFam OS02G0736300 PROTEIN JGI N/AIEA
PF01823Pfam MAC/Perforin domain JGI N/AIEA

Gene model name correspondences to Glyma.05g240200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g34480 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g240200
>Glyma.05g240200.1 sequence-type=CDS polypeptide=Glyma.05g240200.1.p locus=Glyma.05g240200 id=Glyma.05g240200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTGAAGGCATAGTTGAGAGAGCGCTGAACAGCTTAGGAAAGGGCTTCGACTTGGCCTCAGATTTCAGGCTCAAGTTCTGCAAAGGCGAAGAGCGTTTGGTTCTTCTCAACGAAACAGAGAAACGAGAGCTCATGGTGCCAGGTTTCAGACCCATCAGAGATGTCTCCGTTGACATCAAATGCGACAAGGGCGATCGCACCCGCTACCAATCCGACATCCTCACCTTCACCCAAATGTCAGAGCTCTTCAACCAGAAAAGTTCAATCCCTGGGAGAATTCCATCTGGGTATTTCAACACCGTGTTTGGATTTGACGAGGGTTCATGGGCAACTGATGCAGCTAACACAAAGTGTTTGGGTATTGATGGCTACTTTATCAAACTCTTCAATGCTCATATTGATCGGTACCCTCTTGTTCTGTCTCAACAAGTCCTTGAAGCCGTTCCTTCTTCCTGGGATCCTCCTGCACTTGCAAGATTCATCGAGAACTTCGGGACACACATCCTTGTGGGGCTTAGCATTGGTGGCAAAGACTTAGTGTTGGTCAAGCAAGACGTGTCTTCCAACTTGGAGCCATCAGAGCTCAAGAAGCACTTGGATGAGCTTGGAAATCAATTATTCAATGGGACATGCAATTTCCTTCCAAAATCCAAAGAACAAAAATATAAGGCACCGCAAGCTTTTGATGTCTTCGGTCCACAAATTGTTGCCTTCAATAGCTCTACATCCGTTTGTGCAAAAGATGGAATTACGGTGATATGTGCAAAAAGGGGAGGAGATACCCAAGTGAGCGACCATAGTGAATGGCTTCTGACAGTTCTAAAGAAGCCAGATGCTGTTGATTTTAGCTTCATTCCTATCACTTCTCTTCTTAAAGGTGCTCCAGGCAAAGGCTTCCTATCCCATGCCATCAACCTCTACCTTCGATATAAACCTCCAATGTCAGATTTGCCTTACTTTCTTGACTACCAATCACACAAGCTTTGGGCTCCCATTCACAATGATCTTCCACTCTGTCCAGCTTCGAACAGAACTAACCTTTCACCTTCTCTTAGTTTCAACTTGATGGGTCCCAAACTTTACGTAAACACCTCACAGGTAACAGTTGGTAAAAGGCCAATCACAGGGATGCGCCTGTTTCTTGAGGGCATGAAATGCAACAGGTTAGCCATACACGTGCAACATCTATTAAACCCTCCAATAATGCTGAACAACAAAATAGAGGACACACCAATATGGTCAGAAGAAATCAATGATGACCGTTTCTTTGAAGCAATCAATGGGAAGAAATTTTCCCATGTATGTACAGCACCAGTGAAATACAACCCTAGATGGAGCTCTGACAAAGATGTGGCCTTTATTGTCACAGGAGCCCAGCTTGATGTGAAGAAACATGACTCAAGGAGTGTCCTTCATTTGAGGCTGTTGTTCTCTAAGGTGTCTAATTGTGCAGTTGTAAAATCAAGTTGGACACAGGGCTCCTCCGGGTTATCCCAGAGGTCTGGCATTTTCTCAGTAATAAGCACATCAATTTCTGGTAAAGACCAGAACCAGAAAAAACCAGTTGTGGTTTTGGATTCAAGTGTGTTTCCAACAGGACCTCCAGTGCCTGTGCAAACACAAAAGCTGTTGAAATTTGTAGAAACGTCACAGTTGTGTAAAGGTCCACAAGATAGTCCTGGCCATTGGTTGGTCACTGGGGCAAGCTTGGTCTTGGATAAGGGTAAGATATGTTTATGGGCTAAGTTCTCATTGTTACATGCTGGTTCATGA
Predicted protein sequences of Glyma.05g240200
>Glyma.05g240200.1.p sequence-type=predicted peptide transcript=Glyma.05g240200.1 locus=Glyma.05g240200 id=Glyma.05g240200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGEGIVERALNSLGKGFDLASDFRLKFCKGEERLVLLNETEKRELMVPGFRPIRDVSVDIKCDKGDRTRYQSDILTFTQMSELFNQKSSIPGRIPSGYFNTVFGFDEGSWATDAANTKCLGIDGYFIKLFNAHIDRYPLVLSQQVLEAVPSSWDPPALARFIENFGTHILVGLSIGGKDLVLVKQDVSSNLEPSELKKHLDELGNQLFNGTCNFLPKSKEQKYKAPQAFDVFGPQIVAFNSSTSVCAKDGITVICAKRGGDTQVSDHSEWLLTVLKKPDAVDFSFIPITSLLKGAPGKGFLSHAINLYLRYKPPMSDLPYFLDYQSHKLWAPIHNDLPLCPASNRTNLSPSLSFNLMGPKLYVNTSQVTVGKRPITGMRLFLEGMKCNRLAIHVQHLLNPPIMLNNKIEDTPIWSEEINDDRFFEAINGKKFSHVCTAPVKYNPRWSSDKDVAFIVTGAQLDVKKHDSRSVLHLRLLFSKVSNCAVVKSSWTQGSSGLSQRSGIFSVISTSISGKDQNQKKPVVVLDSSVFPTGPPVPVQTQKLLKFVETSQLCKGPQDSPGHWLVTGASLVLDKGKICLWAKFSLLHAGS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo