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Report for Sequence Feature Glyma.05g239900

Feature Type:gene_model
Chromosome:Gm05
Start:41569430
stop:41571546
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g239900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G12400.1AT JGI N/AIEA
GO:0006289GO-bp nucleotide-excision repair JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0000439GO-cc transcription factor TFIIH core complex JGI N/AIEA
K10845KEGG DNA repair and recombination proteins JGI N/AIEA
KOG3451 KOG Uncharacterized conserved protein JGI N/AIEA
PTHR28580PantherFam GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 JGI N/AIEA
PTHR28580:SF1PantherFam GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 5 JGI N/AIEA
PF06331Pfam Transcription factor TFIIH complex subunit Tfb5 JGI N/AIEA

Gene model name correspondences to Glyma.05g239900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g34510 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g239900
>Glyma.05g239900.1 sequence-type=CDS polypeptide=Glyma.05g239900.1.p locus=Glyma.05g239900 id=Glyma.05g239900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGATTAGAAAAAAACTTTGAATGCTTAGTTTGGCATGGCACAGAAAGTGAAAAATTTTTCCAATCCCATCATCCTCTCTGTCTCGCAGGGGACAGCCACCAAGAAAGGCAATTTACAGGAAGGTTATACGACATGGTCAATGCCACTAAAGGGGTCTTTATTTCCTGTGACATACCTATGGCACAATATATCATCAACATGAATGCTTCATTGCCTGCATCTGACAAGTTCATTATACATATCTTGGATAATACCCATATGTTTGTTCAACCTCATGTTGAGCAAATGATACGAAGTCAAATTGCCAAGTTTAGAGAGGACAATACATATGTCAAGCCTAATTGA
Predicted protein sequences of Glyma.05g239900
>Glyma.05g239900.1.p sequence-type=predicted peptide transcript=Glyma.05g239900.1 locus=Glyma.05g239900 id=Glyma.05g239900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGLEKNFECLVWHGTESEKFFQSHHPLCLAGDSHQERQFTGRLYDMVNATKGVFISCDIPMAQYIINMNASLPASDKFIIHILDNTHMFVQPHVEQMIRSQIAKFREDNTYVKPN*






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