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Report for Sequence Feature Glyma.05g239400

Feature Type:gene_model
Chromosome:Gm05
Start:41552756
stop:41556357
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g239400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G68050.1AT ADO3,FKF1 JGI N/AIEA
GO:0042752GO-bp regulation of circadian rhythm JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K12116KEGG Ubiquitin system JGI N/AIEA
KOG4693 KOG Uncharacterized conserved protein, contains kelch repeat JGI N/AIEA
PTHR23244PantherFam KELCH REPEAT DOMAIN JGI N/AIEA
PF00646Pfam F-box domain JGI N/AIEA
PF07646Pfam Kelch motif JGI N/AIEA
PF13415Pfam Galactose oxidase, central domain JGI N/AIEA
PF13418Pfam Galactose oxidase, central domain JGI N/AIEA
PF13426Pfam PAS domain JGI N/AIEA

Gene model name correspondences to Glyma.05g239400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g34530 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g239400
>Glyma.05g239400.1 sequence-type=CDS polypeptide=Glyma.05g239400.1.p locus=Glyma.05g239400 id=Glyma.05g239400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGTGACAAAAGAGAAAGAGGATGTTCGGAACACTGGGAAGAGATTGAAATGCATGAGGAATGAAGAAGAAGAAGTTTATGAAGAAGAAGAGAGTGAGCTTCCTTTAAAGCCAGGATTTTTCTTCTACCCAACAACACCCACTTCCTTTGTTGTATCTGATGCTCTTGAACCCGATTTTCCCATCATATATGTCAACAAGGTCTTTGAAATCTCCACTGGATATCGTGCTGACGAGGCCCTCGGTCGCAATTGTCGGTTCTTACAGTATAGAGATCCTCGAGCTCAGAGGAGGCACCCTTTGGTGGATCCTGTTGTTGTGTCTGAGATTAGAAGATGCCTCGAGGAAGGTGTTGAGTTCCAAGGTGAACTTCTGAATTTCAGAAAGGATGGTACTCCTTTGGTGAACAGACTGAGACTTGCGCCAATTCATGACGATGATGGAACTGTGACACATGTGATAGGTATCCAACTCTTTTCTGAGGCAAATATAGATCTGAACCGTGTCTCATATCCAGTCTTCAAAGAGACTTGCAATCAAGATTTTGATAAGACTGGTAAATATAATCCTAAGAGTGGACAATCATTGTACAGTCAGCACCAAGAGATGTGTGGCATTCTTCAGCTTTCTGATGAAGTCTTGGCTCACAACATTTTGTCACGCTTGACACCGAGGGATGTTGCATCCATTGGGTCTGTATGCAGGAGGATCCGTCAATTAACAAAGAACGAGCATGTCAGGAAGATGGTATGTCAAAATGCGTGGGGCAAAGAAGTGACGGGCACATTGGAACTGATGACCAAGAAGTTAGGATGGGGTCGTCTGACTCGGGAACTTACCACTCTCGAAGCTGTTTGTTGGAGAAAACTGACAGTTGGAGGTGCAGTGGAGCCTTCACGCTGCAATTTCAGTGCTTGTGCTGCAGGAAACCGACTTGTATTGTTTGGAGGTGAAGGAGTGGATATGCAACCTATGGATGACACTTTTGTTCTAAATCTTGATGCTAAAAATCCAGAATGGCGCAGGGTTAGTGTGAAATCATCCCCTCCCGGAAGGTGGGGCCACACGCTCTCATGCTTAAATGGTTCTTGGTTGGTGGTTTTTGGTGGGTGTGGTAGGCAGGGATTGCTCAATGATGTGTTTGTGCTTGATTTGGATGCTCAACAGCCAACATGGAGGGAGGTTTGTGGTGGAACACCACCACTTCCTAGATCATGGCATAGCTCTTGCACAATTGAAGGGTCCAAATTGGTTGTCTCCGGCGGGTGCACAGATGCTGGGGTACTTCTTAGTGACACATATTTACTGGACCTCACAACAGATAATCCAACATGGAGAGAAATTCCAACTTCATGGGCTCCTCCTTCTCGGTTGGGGCACTCACTCTCAGTCTATGGGAGGACTAAGATTCTAATGTTTGGAGGACTTGCCAAGAGTGGACACTTGCGGCTACGATCAGGCGAGGCTTATACAATTGACTTAGAAGATGAACAACCACAATGGAGGCAACTAGAATATAGCGCATTCACAGGGTTAGCGAGTCAAAGTGCTGTTGTTCCTCCTCCTAGGCTGGATCATGTTGCTGTCAGCATGCCTTGTGGGAGGATCATTATATTTGGAGGTTCCATTGCTGGTCTTCACTCACCATCTCAGCTCTTTCTGTTGGACCCCTCTGAAGAAAAACCATCCTGGAGGATCCTCAATGTTCCTGGGCAACCGCCGAAATTTGCTTGGGGTCATAGCACTTGTGTGGTTGGAGGGACAAGGGTGTTGGTGTTGGGTGGACACACTGGGGAGGAATGGATACTGAATGAGTTGCATGAGTTATGCTTGGCAAGTCGACAGGACTCTGACCTGTGA
Predicted protein sequences of Glyma.05g239400
>Glyma.05g239400.1.p sequence-type=predicted peptide transcript=Glyma.05g239400.1 locus=Glyma.05g239400 id=Glyma.05g239400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAVTKEKEDVRNTGKRLKCMRNEEEEVYEEEESELPLKPGFFFYPTTPTSFVVSDALEPDFPIIYVNKVFEISTGYRADEALGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRLRLAPIHDDDGTVTHVIGIQLFSEANIDLNRVSYPVFKETCNQDFDKTGKYNPKSGQSLYSQHQEMCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLELMTKKLGWGRLTRELTTLEAVCWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKNPEWRRVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAQQPTWREVCGGTPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDNPTWREIPTSWAPPSRLGHSLSVYGRTKILMFGGLAKSGHLRLRSGEAYTIDLEDEQPQWRQLEYSAFTGLASQSAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSDL*






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