SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g239000

Feature Type:gene_model
Chromosome:Gm05
Start:41531646
stop:41533730
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g239000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G57490.1AT JGI N/AIEA
GO:0006412GO-bp translation JGI N/AIEA
GO:0005840GO-cc ribosome JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0003735GO-mf structural constituent of ribosome JGI N/AIEA
K02981KEGG Ribosome JGI N/AIEA
KOG0877 KOG 40S ribosomal protein S2/30S ribosomal protein S5 JGI N/AIEA
PTHR13718PantherFam RIBOSOMAL S SUBUNIT JGI N/AIEA
PF00333Pfam Ribosomal protein S5, N-terminal domain JGI N/AIEA
PF03719Pfam Ribosomal protein S5, C-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.05g239000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g34570 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g239000
>Glyma.05g239000.1 sequence-type=CDS polypeptide=Glyma.05g239000.1.p locus=Glyma.05g239000 id=Glyma.05g239000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCGAACGTGGAGGCGGAGACCGTGCCGGTTTCGGTCGCGGCTTTGGCGGTCGTGGACGCGGCGGCGACAGGGGACGAGGGCGGCGCAGGGCAGGAGGGCGCCGCGACGAGGAGGAGAAGTGGGTCCCAGTGACGAAGCTGGGGCGCCTGGTGAAGGAGGGGAAAATTCGGAGCCTGGAGCAGATCTACCTACACTCGCTCCCAATCAAGGAGCACCAAATCATTGACACCCTCGTGGGGCCCACCCTGAAGGACGAGGTGATGAAGATCATGCCCGTCCAGAAGCAGACCCGCGCCGGTCAGCGAACCCGCTTCAAGGCCTTCGTGGTGGTCGGCGACAACAACGGCCACGTCGGTCTCGGAGTGAAGTGCAGCAAGGAAGTCGCCACCGCCATACGCGGCGCCATCATTCTCGCAAAGCTCTCTGTTATTCCTGTGAGGAGAGGCTATTGGGGTAACAAGATCGGAAAGCCCCACACCGTTCCCTGCAAGGTTACCGGAAAGTGTGGCTCCGTCACCGTCCGCATGGTCCCCGCCCCTCGTGGGTCCGGAATCGTCGCCGCTAGGGTCCCCAAGAAGGTCTTGCAGTTCGCTGGAATCGATGACGTCTTCACTTCCTCCAGGGGTTCCACCAAAACCCTCGGAAATTTCGTCAAGGCTACTTTTGACTGTTTGCTGAAAACCTACGGTTTTCTAACACCTGAATTCTGGAAGGAGACTCGGTTCTCCAAATCACCATTCCAAGAGTACACTGATCTATTGGCAAAGCCAACAGGGAAGGCCCTTATCCTCGAGGAGGAAAGGGTGGAGGCTTGA
Predicted protein sequences of Glyma.05g239000
>Glyma.05g239000.1.p sequence-type=predicted peptide transcript=Glyma.05g239000.1 locus=Glyma.05g239000 id=Glyma.05g239000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAERGGGDRAGFGRGFGGRGRGGDRGRGRRRAGGRRDEEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTGKALILEEERVEA*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo