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Report for Sequence Feature Glyma.05g237800

Feature Type:gene_model
Chromosome:Gm05
Start:41448833
stop:41454914
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g237800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G48790.1AT AMSH1 JGI N/AIEA
3.4.19.12EC ubiquitinyl hydrolase 1 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
K11866KEGG Ubiquitin system JGI N/AIEA
KOG2880 KOG SMAD6 interacting protein AMSH, contains JAB/MPN/Mov34 domain JGI N/AIEA
PTHR12947PantherFam AMSH-LIKE PROTEASE JGI N/AIEA
PF01398Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease JGI N/AIEA
PF08969Pfam USP8 dimerisation domain JGI N/AIEA

Gene model name correspondences to Glyma.05g237800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g34700 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g237800
>Glyma.05g237800.1 sequence-type=CDS polypeptide=Glyma.05g237800.1.p locus=Glyma.05g237800 id=Glyma.05g237800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTGTTCTTCGGAGACGATCAACATCGCTGCGAGTACACAGAAACTTGATGTTGATAATCGAATTGCTCTTCGCTTCTACTACAGAATTGCCGATAATATCCTCAAACAGGCTGATATCTTTCGTGCAGAGACAAATATAGTTGATCTGTATATCATGCTCCTAAGATTTTCCAGTTTGGTCTCTGAGACAATACCTCGTCACCGAGATTATAGATCATCTCCTCAAGGCAAGAAAGAAGCTTTGAGAAAGAAATTGTTACATTCTATGAATGAGCTAGAGAAATTGAAACCGAAAGTGCAACAGAAGATCAATGAGTTTAACAGCAGGCGAGCATATCAACCCAATGGGTGGGAGAAATGTCATTCAAATAATTTTATGGATTTTTCTCCAGCAAAAAAGCAAACTTTGACTAGTTATAATAAAAAAAAGGCAGTCATACCAACCACTGGAGAGTTTGTTTACCAAGGATCAAGGGGCCAACAGTTTTCTAGTGTAAGGCCTGTGGAAGAGAATATGAGGAGACTATCTCTAAGTCTCCTACGCCCAAAGGAGGAAACTCTCTCCAGACATTCAATTCTAGGTCCCAATGGGCTGAAAGGGCAGTGGCGACCACCTGCAAGTGATAAAGGGGTCAGGTATCCAACCATCATAGATCTGTCTCCAGTTGAAATTCCAAGCCTTCAACAACCCTTGGTAGATGGATCTCTGACTAAAAAAGATAATAGCATTTCAGAACAACATAAATCAGATTTAGAATCAATTCTTACCCAGAGTGATGACTGCAAGGCAAAGCATGCTGATGAAGCTCCTTCGCTTATCTCTTTTGAAGCAACAGAAATTCCTGCTCAAATAGAAGTTACCAGACAGCCTTCTCCTCCACCTGTACTTGCTGAAGTACAAGATTTGGTTCCTGCAATGTTACCTCATGTTATTGAGGAAGGATGTAAGACAGAGATTCCAATGTCGGATAGTATTGTTCGTGCTGAGTCTCCGCTGCAACTACACATATCAACTTCTATGATGGAGAGTTTTATGAAGCTTGCCAAGTCAAACACTGACAAAAATTTAGAGACTTGTGGAATCCTTGCTGGTTTGCTTAAAAACAGAAAATTTTATATTACCACTCTAATAATCCCAAAGCAGGAGGCAACATCCAGTTCTTGTCAAGCTACAAATGAAGAGGAGATATTTGAAGTACAGGATAAGCAGTCTCTTTTCCCCCTTGGGTGGATCCACACACATCCTACACAATCTTGTTTCATGTCATCAATTGATGTACACACCCATTACTCTTATCAGATTATGCTGCCAGAAGCTGTTGCAATAGTTATGGCACCAACCGACAGTTCAAGAAACCATGGCATTTTTCGGTTGACAACCCCTGGTGGAATGTCGGTCATTAGACAATGCCAGCAGCGTGGCTTTCATCCACATAATCAACCTCCAGATGGCGGTCCCATTTACGATACATGTACAGATGTTTACATGAACCCAGATTTAAAATTTGATGTCATTGATCTTCGATGA
Predicted protein sequences of Glyma.05g237800
>Glyma.05g237800.1.p sequence-type=predicted peptide transcript=Glyma.05g237800.1 locus=Glyma.05g237800 id=Glyma.05g237800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MCSSETINIAASTQKLDVDNRIALRFYYRIADNILKQADIFRAETNIVDLYIMLLRFSSLVSETIPRHRDYRSSPQGKKEALRKKLLHSMNELEKLKPKVQQKINEFNSRRAYQPNGWEKCHSNNFMDFSPAKKQTLTSYNKKKAVIPTTGEFVYQGSRGQQFSSVRPVEENMRRLSLSLLRPKEETLSRHSILGPNGLKGQWRPPASDKGVRYPTIIDLSPVEIPSLQQPLVDGSLTKKDNSISEQHKSDLESILTQSDDCKAKHADEAPSLISFEATEIPAQIEVTRQPSPPPVLAEVQDLVPAMLPHVIEEGCKTEIPMSDSIVRAESPLQLHISTSMMESFMKLAKSNTDKNLETCGILAGLLKNRKFYITTLIIPKQEATSSSCQATNEEEIFEVQDKQSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPEAVAIVMAPTDSSRNHGIFRLTTPGGMSVIRQCQQRGFHPHNQPPDGGPIYDTCTDVYMNPDLKFDVIDLR*






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