SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g237400

Feature Type:gene_model
Chromosome:Gm05
Start:41410983
stop:41415786
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g237400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G48760.3AT delta-ADR JGI N/AIEA
GO:0006886GO-bp intracellular protein transport JGI N/AIEA
GO:0016192GO-bp vesicle-mediated transport JGI N/AIEA
GO:0030117GO-cc membrane coat JGI N/AIEA
K12396KEGG Membrane trafficking JGI N/AIEA
PTHR22781PantherFam DELTA ADAPTIN-RELATED JGI N/AIEA
PTHR22781:SF12PantherFam AP-3 COMPLEX SUBUNIT DELTA-1 JGI N/AIEA
PF01602Pfam Adaptin N terminal region JGI N/AIEA

Gene model name correspondences to Glyma.05g237400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g34740 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g237400
>Glyma.05g237400.1 sequence-type=CDS polypeptide=Glyma.05g237400.1.p locus=Glyma.05g237400 id=Glyma.05g237400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGGGTTCGATCATGGAGAACCTCTTCCAGCGCACGCTGGAGGATCTGATCAAAGGCATGCGCCTCCAACTCATCGGTGAATCCACCTTCATCTCCAAGGCCACGGAGGAGATCCGCCGCGAGATCAAATCCACCGACCAGCACACCAAATCCACCGCCCTCCACAAACTCTCTTACCTCTCCGCCGTGCACGCCGTCGACATGTCCTGGGCCTGCTTCCACGTGGTCGAGGTCATGTCCTCCTCCAAGTTCGCGCACAAGAGGATCGGTTACCACGCCGCGTCGCAGTCCTTCCACGACGACACTCCGGTGCTCCTCCTCATCACCAACCAGCTCCGCAAGGACCTCTCCTCCACCAACGACTTCGAGGTAAGCCTCGCCCTCGATTTGCTCTCGCGGATCGCCACTCTCGACCTCGCTCGCGATTTGACCCCCGAGGTTTTCAAATTGCTCTCCACCGCTAGGGTTTTCGTTAGGAAGAAGGCAATCGCCGTCGTTTTGAGGGTTTTCGATAAGTACCCCGATGCGGTTAGGGTTTGCTTCAAGCGTTTGGTTGAGAATCTTGAAAGTTCTGATCCTCAGGTTGTGACCGCCGTGGTCGGGGTTTTCTGCGAGCTGGCTGCCAAGGATCCTAAGTCGTATCTTCCCTTGGCGCCCGAGTTCTATAGGATTTTGGTTGATTCTAAGAACAATTGGGTTTTGATTAAGGTGCTGAAGGTGTTTGCTAAGTTGGCTCCCTTGGAACCTAGATTGGGGAAGAGAATTGTTGAGCCTGTTTGTGACCATATGAGGCGGTCAGGGGCCAAGTCCTTGGTGTTTGAGTGTGTTAGGACTGTGCTCACTAGCTTGAGTGGTTATGAGTCTGCTGTTAAGCTCGCTGTTGAGAAGGTTAGGGAGTTGTTGGTTGATCAGGATCCCAATCTTAGGTATCTTGGCCTGCAGGCGCTTTCGGTTGCTGCGCCCGAGCACTTGTGGGCGGTGATGGAGAATAAGGAGGCGGTGGTTAAGTCGTTGAGTGATGATGATTCGAATATCAAGATTGAGTCACTGCGATTGTTGATGGCCATGGTGTCTGAGAGCCATGTGGCAGATATCTCCAGGGTGTTGCTTAATTATGCATTGAAGTCTGACCCAGAATTTTGTAATGAGATTTTGGGTTCCATTTTGATGACGTGTTCTAGAAATGTGTACGAGATTGTTGTTGACTTTGATTGGTATGTGTCTCTTCTTGGAGAAATGGCGATGATTCCTAATTGCATAAAGGGGGAAGAGATTGAGACTCAGCTCGTTGATATTGGTATGAGAGTTAAGGATGCTAGAATGCAGCTTGTTCGGGTTGGGCGTGATCTGTTGATTGACCCTGCATTACTGGGTAATGTGCACTTGCATAGGATATTGTGTGCTGCTGCTTGGGTTGCTGGAGAGTACGTTGAGGTTGCGAGCAATCCCTTTGAACTCATGGATGCACTCCTACAGCCTCGAACCAGTCTCTTGCCACCATCAATAAGAGCAGTTTATATTAATTCTGCTCTTAAAATTTTAATTTTTTGCCTGGACTGTTACTTTCATCAAAATGAAGGTTCTGCATCTTGGTATTCTGATCATTTGGCTGGGGGACAGTCAGATTTGTTTAGTGTAAAAAATGACACTGAGGCTGCTGAATTAGCAATGTGTGAAGGATCAAATTATGAACATCATGGGGATTTTAACCCAAGGAATGCAACTGAATCTTCTGAGGATCTTTCAGTTGAAAATGATGTAGATAGAGTAGCCCCTCATGGTCAAACATCTACACCTCCTACTCTCTCAGTGAACAAAAATTCCATGCATGAATCTATTGTAAACCTATTGAATCGAATTGAATTAATTCTTGGCCCGCTAATATCAAACCAGGATGTTGAAGTGCTGGAGAGAGCACGAAACATACTTTCCCTTGTTCAGTTGGTTAAAGAAGAAATAATTGATAATTCAGTCCAGAGTGTGGTGGACATTGTGAACAAGAAAGATACTCGAGTTACGGCTATTATCAATTTGTTGCGTGATGCTTTTACTACGGAACTTGGTCCAGTCTCAACAAGTGCACAGGGAAGAATTGTTTTGCCGGATGGATTAGTTCTTGAAGAAAATCTAGATGACTTACAAGCAATATGTGGTGATATTGAACTACCTTCATCAAGTTTGTTTGGCGCAGGAGGTCCTCACCTTACCACTACTTTGGATGCTTCTTCATCTAATCTTCTGAAAAATGAAGAGTCAGGGCCATTGAAGGAATCCACATCCTTGATTGAGCACCGTAAGCGGCATGGATTATATTATCTTCCTTCGGAGAAGAGTGAGATTGTTTCAGATGAGTATCCTCCTGCAAATGATCCAAAGTCTAACAGTAATATAAATGATGAAGCTGCAGAGCTAGTCAAGCTGACAGAGCAATCACTTCTTCTCAAGAAAAGGACAAACCAAACAAAGCCCAGGCCTGTAGTGGTGAGATTGGATGATGGAGATGTGGCACCAATTACAGTCAAAAGACCAGAGCCATTGGATGATTCTCTTTCTGGTGCCATAAAAGATGCTCTTCTAGGAAGCGAAACCAGACCAAGTATGTCTGGAAGCAGTCCTTCTGATAAGTCATCAAGGAAGAAAGAGAAAAAGAAACTAAGCACACGTGTTCGATCTGAAATGAAGAAAAATGTAGTTGATGCAGAAAATCCTGAACTTGAAAACCCAAATTCAAGTAGCAAAAATCATGGTCATAGTCATACTAAAGAGAGAAGACACCAAGGAAAAGAAAAGATTGTTGAGGGGGAAGAGCATGATCAGAGGGAAAAGAAAAAGAGTGGCCACCGCCATGGGAGGCGAAAAACTCATCAAAGAGCAAAGTCACCCTTAAATGTGGTTTCTCAAACCCCAGTAATTCCAGATTTTCTTTTGTAG
Predicted protein sequences of Glyma.05g237400
>Glyma.05g237400.1.p sequence-type=predicted peptide transcript=Glyma.05g237400.1 locus=Glyma.05g237400 id=Glyma.05g237400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSGSIMENLFQRTLEDLIKGMRLQLIGESTFISKATEEIRREIKSTDQHTKSTALHKLSYLSAVHAVDMSWACFHVVEVMSSSKFAHKRIGYHAASQSFHDDTPVLLLITNQLRKDLSSTNDFEVSLALDLLSRIATLDLARDLTPEVFKLLSTARVFVRKKAIAVVLRVFDKYPDAVRVCFKRLVENLESSDPQVVTAVVGVFCELAAKDPKSYLPLAPEFYRILVDSKNNWVLIKVLKVFAKLAPLEPRLGKRIVEPVCDHMRRSGAKSLVFECVRTVLTSLSGYESAVKLAVEKVRELLVDQDPNLRYLGLQALSVAAPEHLWAVMENKEAVVKSLSDDDSNIKIESLRLLMAMVSESHVADISRVLLNYALKSDPEFCNEILGSILMTCSRNVYEIVVDFDWYVSLLGEMAMIPNCIKGEEIETQLVDIGMRVKDARMQLVRVGRDLLIDPALLGNVHLHRILCAAAWVAGEYVEVASNPFELMDALLQPRTSLLPPSIRAVYINSALKILIFCLDCYFHQNEGSASWYSDHLAGGQSDLFSVKNDTEAAELAMCEGSNYEHHGDFNPRNATESSEDLSVENDVDRVAPHGQTSTPPTLSVNKNSMHESIVNLLNRIELILGPLISNQDVEVLERARNILSLVQLVKEEIIDNSVQSVVDIVNKKDTRVTAIINLLRDAFTTELGPVSTSAQGRIVLPDGLVLEENLDDLQAICGDIELPSSSLFGAGGPHLTTTLDASSSNLLKNEESGPLKESTSLIEHRKRHGLYYLPSEKSEIVSDEYPPANDPKSNSNINDEAAELVKLTEQSLLLKKRTNQTKPRPVVVRLDDGDVAPITVKRPEPLDDSLSGAIKDALLGSETRPSMSGSSPSDKSSRKKEKKKLSTRVRSEMKKNVVDAENPELENPNSSSKNHGHSHTKERRHQGKEKIVEGEEHDQREKKKSGHRHGRRKTHQRAKSPLNVVSQTPVIPDFLL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo