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Report for Sequence Feature Glyma.05g234900

Feature Type:gene_model
Chromosome:Gm05
Start:41216621
stop:41223628
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G02760.1AT JGI N/AIEA
6.1.1.21EC histidine-tRNA ligase JGI N/AIEA
GO:0005737GO-cc cytoplasm JGI N/AIEA
K01892KEGG Transfer RNA biogenesis JGI N/AIEA
PTHR11476PantherFam HISTIDYL-TRNA SYNTHETASE JGI N/AIEA
PTHR11476:SF7PantherFam HISTIDINE--TRNA LIGASE JGI N/AIEA
PF00221Pfam Aromatic amino acid lyase JGI N/AIEA
PF03129Pfam Anticodon binding domain JGI N/AIEA
PF13393Pfam Histidyl-tRNA synthetase JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma05g35021 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.05g234900.1 sequence-type=CDS polypeptide=Glyma.05g234900.1.p locus=Glyma.05g234900 id=Glyma.05g234900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCGAAGCTTCCGTAACGGTTGGAGGCAAGGCTTCTTCTCTCTCTTCCTCCTCCGTCTTCGCCGTCGCCACGGGCCTCGCTCACGTGCGGATCGACTCATCCGCGCTCGATAGACTCTCCAAGACCACCGCCACGGAAACGACGTCGTCTCAGCACCGCATCTGCGTCCCCGATTTCCTAACCCTAGAGGAATCCCGCGCCTTCCTTCTGGTCCTCCTCAACAACCTCGTCCTCTCCAATGCCCCCTCCCGCATTCCCCTCCTCCTATCCCAAACCCTCAATTCCAATCCTCCCACCTTCCAATTCCTAGATGCTGACGTCACCCAACCAGACCTTCTCACCTCTTCCACGCTGCTCGCTGTTTCCGCCATTCTCGACCGCCAGTCCGCCGCGCTCTCCGCCTTCGCCGACGTCGCCGCCGCCTTCTCCTGTGAGGCCTTGAAGGCCGATATAACGCCCTTCAATTTGATGGATTCCGGCGACGGACACGCCTCCAAGGCCGAGGTCGCCGTCGCCGCCGACATGCGGGTTCTGCTCAACGGATCCAAATCCGTCGGCAAGGAGAATATTCGATCCGTCGCGAGGGTTCCCAAGGTTCACGGGAGTGTGAGGGAGCAGGCCAAAGCCGTGCACTCGAGAATGCGTGTTGAGTTGAATTCGGGGGTTAAGGGTGTTGTTGTTGGGAGTGAGGAAGCTGTATGCACTGTGCTGTTGCCGTTGGCTGCAGCACTGAAAGAACTTGGTGAGTGTAGTTTCGCACGTGCCAAGAGTAATTCGGAGGTTATTGGTGGTGATGGTTTGAGATTGGGCATTGGGGAGGTGTTTGGGAAGGAATGCCCCACTCAGGATGGTTTGAGCAGTGGTTTAAATAAGGCTGTGAACTTGTTTCTGGGAAAGGAGTATGGTAAGTTTGCACACGAGGTCTTTGTGATGTTTGGACTTGTGTGGAAAGTTGTGGTGTGGGAAGCTGTGACGGCGGTTGCGGTGCTTGAGGCTGCTGAGTTGAATGATGTGATCCTAGGTGTCAAGGAAATGAAAGTAGAGGGGAACACGAAAGTAGAGGAGAAGAAGAAGAAGAAGAAAGTTGTTTTGGGGAAAGGGACTAGCTCGATTTTGGCATTGATCAAGGAGAGGTTACTGAGTGGTCGAGAGATAGCTTTAGGGACTTGGGTGGCAGATTTTCTATCACTTTTGGATTTGGCTAAACCTGAGTTTAATGAATTTTTATTGAAAGTAAAGGATGTTGTAGAGAGCAATGAAAGCAGGAGATTACCCAAGATTCCTAAGGGGACTCGTGATTTTGCTAAAGAACAAATGACAATTAGAAAGAAAGCTTTTCTAATAATAGAAGAAGTTTTTGAGAGGCATGGCGCAACTGCCTTAGATACTCCTGTTTTTGAATTGCGAGAAACTCTCATGGGAAAATATGGAGAAGATTCGAAGTTGATTTATGATCTTGCTGACCAGGGTGGGGAGCTTCTTTCTTTGAGGTATGACTTGACAGTTCCATTTGCTAGGTTTGTGGCTATGAATGGTCTGACATCTTTCAAAAGGTACCAAATAGCCAAGGTTTACAGAAGGGATAACCCATCTAAGGGAAGATACCGTGAATTTTATCAATGCGACTTTGATATTGCTGGTACTCCTACTCCATCTGAAATTATGGGTCCGGACTTTGAGGTTGTTAGGATTTTGACTGAACTACTTGATGAGCTGGACATTGGGGAATATGAGATAAAGTTGAATCATAGAAAGTTACTGGATAGCATGATGCAAATATGTGGTGTACCTCCTGAAAAGTTTAGAACAATATGTTCAAGCATTGACAAGTTAGACAAACAGTCTTTTCAACAGATAAGAAAAGAAATGGTGGAAGAAAAAGGATTAACTGCTGAGACAGCTGACAGAATTGAAACTTTTGTTAAAGAAAAAGGATCTCCTTTAGCATTATTATCTAAATTTAAACAAGAGGGTAGTGATTTCTCAAAACACAAAGGAGCTTCTGAAGCATTGAAAGAGCTGGAAATTTTATTTATAGCTCTGGAAAAATCAAAACGCATTGATAAAGTGGTTTTTGACTTGAGTCTTGCCAGAGGTCTGGATTATTACACTGGAGTTATATTTGAAGCTGTTTTTAAAGGAGGCACTCAGGTTGGTTCAATTGCTGCCGGTGGCCGATATGATAACCTTATAGGGATGTTTGGCTCAAGGTCAGTGCCTGCAGTTGGTGTAAGTCTGGGAATTGAGAGAGTATTTGCCATAATGGAGCAACAACAGAAGAATCTGAACCAGATGGCTCGTCCGACCAAGACAGAAGTCTTAGTGAGCATAGTGGGGAATGACTTTACACTTGCTGCAGAGCTAGCAGGAGAACTGTGGGATGCTAGGGTGAAAGCAGAATTCTTGGTCAATAAAAGAAGAGCGAAACACTTCGAATATGCAAAAGAATCAAGGATCCCTTGGATGGTACTTGTTTATGAGCAGGAAATAAAAGAAGGCGTGGTGCAATTGAAAAATCTCGAGGCCAACATCGATATTAAGATTTCTAGAGCAGAATTTGTGGAGGAACTTCGGAGACGGTTATACCCTTAA

>Glyma.05g234900.1.p sequence-type=predicted peptide transcript=Glyma.05g234900.1 locus=Glyma.05g234900 id=Glyma.05g234900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAEASVTVGGKASSLSSSSVFAVATGLAHVRIDSSALDRLSKTTATETTSSQHRICVPDFLTLEESRAFLLVLLNNLVLSNAPSRIPLLLSQTLNSNPPTFQFLDADVTQPDLLTSSTLLAVSAILDRQSAALSAFADVAAAFSCEALKADITPFNLMDSGDGHASKAEVAVAADMRVLLNGSKSVGKENIRSVARVPKVHGSVREQAKAVHSRMRVELNSGVKGVVVGSEEAVCTVLLPLAAALKELGECSFARAKSNSEVIGGDGLRLGIGEVFGKECPTQDGLSSGLNKAVNLFLGKEYGKFAHEVFVMFGLVWKVVVWEAVTAVAVLEAAELNDVILGVKEMKVEGNTKVEEKKKKKKVVLGKGTSSILALIKERLLSGREIALGTWVADFLSLLDLAKPEFNEFLLKVKDVVESNESRRLPKIPKGTRDFAKEQMTIRKKAFLIIEEVFERHGATALDTPVFELRETLMGKYGEDSKLIYDLADQGGELLSLRYDLTVPFARFVAMNGLTSFKRYQIAKVYRRDNPSKGRYREFYQCDFDIAGTPTPSEIMGPDFEVVRILTELLDELDIGEYEIKLNHRKLLDSMMQICGVPPEKFRTICSSIDKLDKQSFQQIRKEMVEEKGLTAETADRIETFVKEKGSPLALLSKFKQEGSDFSKHKGASEALKELEILFIALEKSKRIDKVVFDLSLARGLDYYTGVIFEAVFKGGTQVGSIAAGGRYDNLIGMFGSRSVPAVGVSLGIERVFAIMEQQQKNLNQMARPTKTEVLVSIVGNDFTLAAELAGELWDARVKAEFLVNKRRAKHFEYAKESRIPWMVLVYEQEIKEGVVQLKNLEANIDIKISRAEFVEELRRRLYP*







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