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Report for Sequence Feature Glyma.05g234700

Feature Type:gene_model
Chromosome:Gm05
Start:41208782
stop:41212464
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G21150.1AT XCT JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
K13119KEGG Spliceosome JGI N/AIEA
KOG2894 KOG Uncharacterized conserved protein XAP-5 JGI N/AIEA
PTHR12722PantherFam XAP-5 PROTEIN-RELATED JGI N/AIEA
PF04921Pfam XAP5, circadian clock regulator JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma05g35040 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.05g234700.1 sequence-type=CDS polypeptide=Glyma.05g234700.1.p locus=Glyma.05g234700 id=Glyma.05g234700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGGGTATGGGAGACGGGTACGTGGGCACCGCCCAAGACGCGGTGAGGATTCGACGGTTGGAGAAGCAGAGAGAAGCGGAGCGTCGCAAAATCCAAGAGCTCAAAACCAAGTCGACCTCCGCCAAGGGCCAACCCGGTCTCCTCCAATTCGGTTCCAGCACTTCCGAGATTCTTGAGACTGCCTTTAAGAAGGAAACTGTGGGTTTGGTCACTAGAGAGCAGTATGTAGAAAAGAGGGTTAACATTCAGAGCAAAATTGAGGAGGAAGAGAAGGAGAAACTTCAGAAGCAACAGCAAGAAGAGGAGGAGCTTCAATTAGAAAAGCGTAAAAAGAGGAAGATCAGGGGCAACTCTCGATTGTCCTTTGCTGAGGATGTTGACAATGATCCCCAAGACGACGAACCACATCATAGTAAGGATAATCTGGAAGCAAATAGATTACGGTGTGGTAAGCTTGGTAAAGACCCTACTGTTGAAACTAGCTTTCTACCTGACAGTGAGCGAGAGGCTGAGGAGCAAGCTGAGCGTGAAAGGCTGCGGAAACAGTGGCTTCGTGAGCAGGAGCAAATTCGAAATGAGCCTCTTGAAATCACGTACAGCTACTGGGATGGAACTGGCCACAGGCGTGTGATCCAGGTACGCAAGGGTGACAGCATAGGAGAGTTTCTTCGAGCAGTTCAACAGCAACTTGCTCCTGAATTCCGAGAGATTCGAACAACTACAGTAGAAAATTTGTTATACGTGAAAGAAGACCTTATCATTCCTCATCAACATAGCTTCTATGAGCTAATTGTGAACAAAGCTAGAGGCAAAAGTGGACCGCTTTTTCATTTCGATGTGCATGAGGATGTACGAACAATTGCTGATGCCACTATAGAGAAGGATGAGTCTCATGCTGGGAAGGTTGTAGAAAGGCATTGGTATGAAAAGAACAAGCATATATTTCCTGCTTCAAGATGGGAGATATATGATCCAGCGAAGAAATGGGAACGTTATACTATCCACGGGGATTGA

>Glyma.05g234700.2 sequence-type=CDS polypeptide=Glyma.05g234700.2.p locus=Glyma.05g234700 id=Glyma.05g234700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGGGTATGGGAGACGGGTACGTGGGCACCGCCCAAGACGCGGTGAGGATTCGACGGTTGGAGAAGCAGAGAGAAGCGGAGCGTCGCAAAATCCAAGAGCTCAAAACCAAGTCGACCTCCGCCAAGGGCCAACCCGGTCTCCTCCAATTCGGTTCCAGCACTTCCGAGATTCTTGAGACTGCCTTTAAGAAGGAAACTGTGGGTTTGGTCACTAGAGAGCAGTATGTAGAAAAGAGGGTTAACATTCAGAGCAAAATTGAGGAGGAAGAGAAGGAGAAACTTCAGAAGCAACAGCAAGAAGAGGAGGAGCTTCAATTAGAAAAGCGTAAAAAGAGGAAGATCAGGGGCAACTCTCGATTGTCCTTTGCTGAGGATGTTGACAATGATCCCCAAGACGACGAACCACATCATAATAATCTGGAAGCAAATAGATTACGGTGTGGTAAGCTTGGTAAAGACCCTACTGTTGAAACTAGCTTTCTACCTGACAGTGAGCGAGAGGCTGAGGAGCAAGCTGAGCGTGAAAGGCTGCGGAAACAGTGGCTTCGTGAGCAGGAGCAAATTCGAAATGAGCCTCTTGAAATCACGTACAGCTACTGGGATGGAACTGGCCACAGGCGTGTGATCCAGGTACGCAAGGGTGACAGCATAGGAGAGTTTCTTCGAGCAGTTCAACAGCAACTTGCTCCTGAATTCCGAGAGATTCGAACAACTACAGTAGAAAATTTGTTATACGTGAAAGAAGACCTTATCATTCCTCATCAACATAGCTTCTATGAGCTAATTGTGAACAAAGCTAGAGGCAAAAGTGGACCGCTTTTTCATTTCGATGTGCATGAGGATGTACGAACAATTGCTGATGCCACTATAGAGAAGGATGAGTCTCATGCTGGGAAGGTTGTAGAAAGGCATTGGTATGAAAAGAACAAGCATATATTTCCTGCTTCAAGATGGGAGATATATGATCCAGCGAAGAAATGGGAACGTTATACTATCCACGGGGATTGA

>Glyma.05g234700.1.p sequence-type=predicted peptide transcript=Glyma.05g234700.1 locus=Glyma.05g234700 id=Glyma.05g234700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKTKSTSAKGQPGLLQFGSSTSEILETAFKKETVGLVTREQYVEKRVNIQSKIEEEEKEKLQKQQQEEEELQLEKRKKRKIRGNSRLSFAEDVDNDPQDDEPHHSKDNLEANRLRCGKLGKDPTVETSFLPDSEREAEEQAERERLRKQWLREQEQIRNEPLEITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREIRTTTVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPAKKWERYTIHGD*

>Glyma.05g234700.2.p sequence-type=predicted peptide transcript=Glyma.05g234700.2 locus=Glyma.05g234700 id=Glyma.05g234700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSGMGDGYVGTAQDAVRIRRLEKQREAERRKIQELKTKSTSAKGQPGLLQFGSSTSEILETAFKKETVGLVTREQYVEKRVNIQSKIEEEEKEKLQKQQQEEEELQLEKRKKRKIRGNSRLSFAEDVDNDPQDDEPHHNNLEANRLRCGKLGKDPTVETSFLPDSEREAEEQAERERLRKQWLREQEQIRNEPLEITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREIRTTTVENLLYVKEDLIIPHQHSFYELIVNKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVERHWYEKNKHIFPASRWEIYDPAKKWERYTIHGD*







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