SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g218700

Feature Type:gene_model
Chromosome:Gm05
Start:39887204
stop:39889448
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g218700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G24015.1AT JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
K19039KEGG Ubiquitin system JGI N/AIEA
KOG1493 KOG Anaphase-promoting complex (APC), subunit 11 JGI N/AIEA
PTHR22765PantherFam RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING JGI N/AIEA
PF13639Pfam Ring finger domain JGI N/AIEA

Gene model name correspondences to Glyma.05g218700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g36680 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g218700
>Glyma.05g218700.1 sequence-type=CDS polypeptide=Glyma.05g218700.1.p locus=Glyma.05g218700 id=Glyma.05g218700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTGTTCCACAACCTCCACCTCCCTCTCAACATCTCTATCCACAAGAAATTCAGCTTAAACTTTACCAAGCCTTCATATTCTCAATTCCCATACTCTTTTCCATCATTTTGGTTCTTTTGTTTTACTTGTTCTACCTCAAAAGGAGGGCTTCTTCTCTCTCATCACCACCTCTCCACATACTTCCCAGTACTACTAATTCACAAACTACATATCCTTATCCTTCACAACCTTGCCGTTTAGATCTGGCAGTGCAATTTCTGGACAAACTTCCAAGAATTTTGTTTGATGAGGATTTAAGAACAGGAGATTCAGTATGTTGTGTTTGCCTAGGAGAATTTGAGCTGAAGGAAGAGTTGCTACAGATTCCTTATTGCAAGCATGTGTTTCATATAAGCTGCATAAGTAACTGGCTGCAATCAAACTCCACGTGTCCACTTTGTAGATGCTCCATCATTCCCTCTACCAAGTTCCTTAATCCCGCGCCACCTATTATATCAGACCCAACACGGCAAGGTGGAGTTTCAGGCTCTTCATCACACATCTTGTCATTGCCTCATCAACAAGAAGAAGTTGGTGCTTCCACAAATACTACCATTTTTCAAGGGAATGATGTATAA
Predicted protein sequences of Glyma.05g218700
>Glyma.05g218700.1.p sequence-type=predicted peptide transcript=Glyma.05g218700.1 locus=Glyma.05g218700 id=Glyma.05g218700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGVPQPPPPSQHLYPQEIQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASSLSSPPLHILPSTTNSQTTYPYPSQPCRLDLAVQFLDKLPRILFDEDLRTGDSVCCVCLGEFELKEELLQIPYCKHVFHISCISNWLQSNSTCPLCRCSIIPSTKFLNPAPPIISDPTRQGGVSGSSSHILSLPHQQEEVGASTNTTIFQGNDV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo