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Report for Sequence Feature Glyma.05g200900

Feature Type:gene_model
Chromosome:Gm05
Start:38476537
stop:38481098
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g200900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G26744.4AT ATICE1,ICE1,SCRM JGI N/AIEA
GO:0046983GO-mf protein dimerization activity JGI N/AIEA
PTHR31945PantherFam TRANSCRIPTION FACTOR SCREAM2-RELATED JGI N/AIEA
PF00010Pfam Helix-loop-helix DNA-binding domain JGI N/AIEA

Proteins Associated with Glyma.05g200900
LocusGene SymbolProtein Name
HLH helix-loop-helix

Gene model name correspondences to Glyma.05g200900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g38530 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g200900
>Glyma.05g200900.1 sequence-type=CDS polypeptide=Glyma.05g200900.1.p locus=Glyma.05g200900 id=Glyma.05g200900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGTCTGGTTGGATGCAAGACACAGCAGAAGAACAAAACTCTGCTTCTGCTTCATGGCCAAACTCAAACGCCAACAACGAATTAAGCTGCGTGTCATTGTGTGCTTACAAACCGATCTCCTCCCAGATCCATGAAGCAGAATGGCGGCACGTGCCCAACAACATAACACATACCAACGTTGCTGCTTCTGATAATTATAATCTGCTTCAACAACCATTGCACCCTACTAACCTCAACTTTCTCACTCCCAAGCCCACCTTTTACCCTTTGGAGATGAGTTCCGATGTGGGATTTCTTGACCCTCAAGCTTCCTTCACTTCGAAAACTGATGGTGATGTCTTCTTGAGCTCAAATAATAACCTTTTAACCCTTCCAAATATGAGCTCAAGCATGTGTGTGGTGTCCCCCCAACCCCAACAACAAGGAAGTGTTGTTGGATTTTCGGGTTTCAAGAATATTATGGGCTCTGATCATGATCACGTGGTGGAGGGTTCTAGAAAGGCCTTGCTTCTGAGCTGCAGGTCCAGCATACTCAGACCCCTTGAATCGTTGCCCCCATCAGGTTCACAGCCAACACTTTTTCAAAAGAGAGCAGCACTTAGGAAAAACTTGGCCGTGGCTGATGATAACTGCAAAGGCAAGAAGAGTGAAGTACTCATTGATAGTAAGAAGAGGGGAACGTGTAATAATGTTGGAGAAGGTGTTGAAGGTGGGAGTTTTGATGGGTCGGGGTTGAATAATTATGATTCTGATGAGATCAGTGATGACAACAATAAGATGGAAGAGATTAGTGCAAGGAACGGTGGAAACAGCTCAAAAGCCAATAGCACCGTCACCGGCAGCGGCGTGGATCAAAAGGGCAAGAAGAAGACAGGAATACCTGCAAAGAATTTGATGGCTGAACGCCGTCGAAGGAAGAAACTCAATGATAGACTCTACATGCTGAGATCCGTTGTTCCCAATATTAGCAAAATGGACAGGGCTTCAATCCTTGGGGATGCAATCGAGTATTTGAAGGAACTTCTGCAAAGGATCAGTGAGCTTCACAATGAATTGGAGTCAACACCAGCAGGTGGCTCTTCAAGCTTTCTTCATCATCCTTTGACACCCACTACTCTACCAGCCCGTATGCAAGAAGAACTTTGTCTCAGCTCGTTGCCAAGCCCTAATGGCCATCCTGCTAATGCTAGGGTTGAGGTTGGGTTGCGCGAAGGAAGAGGTGTAAACATCCACATGTTTTGCGACCGGAAACCCGGACTCTTGCTCTCTACCATGACGGCTCTCGACAACCTTGGACTAGACATTCAGCAGGCAGTTATCAGCTATGTCAATGGATTTGCTATGGATATTTTCAGAGCTGAGCAACGCAACGAAGGTCAGGATGTCCATCCGGAACAAATCAAAGCGGTTTTGTTGGATTCAGCTGCTGGCTTCCATAGCATGTCCTAA
Predicted protein sequences of Glyma.05g200900
>Glyma.05g200900.1.p sequence-type=predicted peptide transcript=Glyma.05g200900.1 locus=Glyma.05g200900 id=Glyma.05g200900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMSGWMQDTAEEQNSASASWPNSNANNELSCVSLCAYKPISSQIHEAEWRHVPNNITHTNVAASDNYNLLQQPLHPTNLNFLTPKPTFYPLEMSSDVGFLDPQASFTSKTDGDVFLSSNNNLLTLPNMSSSMCVVSPQPQQQGSVVGFSGFKNIMGSDHDHVVEGSRKALLLSCRSSILRPLESLPPSGSQPTLFQKRAALRKNLAVADDNCKGKKSEVLIDSKKRGTCNNVGEGVEGGSFDGSGLNNYDSDEISDDNNKMEEISARNGGNSSKANSTVTGSGVDQKGKKKTGIPAKNLMAERRRRKKLNDRLYMLRSVVPNISKMDRASILGDAIEYLKELLQRISELHNELESTPAGGSSSFLHHPLTPTTLPARMQEELCLSSLPSPNGHPANARVEVGLREGRGVNIHMFCDRKPGLLLSTMTALDNLGLDIQQAVISYVNGFAMDIFRAEQRNEGQDVHPEQIKAVLLDSAAGFHSMS*






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