SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g198600

Feature Type:gene_model
Chromosome:Gm05
Start:38279500
stop:38287490
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g198600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G07400.1AT JGI N/AIEA
GO:0006281GO-bp DNA repair JGI N/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0008081GO-mf phosphoric diester hydrolase activity JGI N/AIEA
PTHR12415PantherFam TYROSYL-DNA PHOSPHODIESTERASE 1 JGI N/AIEA
PF06087Pfam Tyrosyl-DNA phosphodiesterase JGI N/AIEA

Gene model name correspondences to Glyma.05g198600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g33270 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g198600
>Glyma.05g198600.1 sequence-type=CDS polypeptide=Glyma.05g198600.1.p locus=Glyma.05g198600 id=Glyma.05g198600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATTTCATTTCATGGCAATGGCGACGACGGCGACGGCGTTGCGCTTCTTCGAGAAGCCTCCAACGGGGTTCTATTTTCGGTTGGAGATAGGGTTTCACTGGCTTGTGGGAACGAGAAGGGTTCGTGTGGGGTTGGGAACGAAATTGAGTTTGTTGTTGAGAGAATTGACTTCGAAGAGTGTGGTGGTGAAATTGATGGGTTAAAAACATTCGCGGGACACTCGCAGAGTGGGAAGGGGAATAAGAGGGTTTTTGCTGTGACGGCTAATGATCCGAGGTATGAGGGTGTTGTTGGGAGAGCAAGGTTTCTTCAAGATAGGTGCAGAGATATATTGCTTAGTAACGATCCCGTGTCGCGCATTCTGCGCGATGAATCGAATAAAGTGAAGAATTTGGATCCCAAAGCGGTTGCTGACGAGGTTCCTAATACGGTGAGAGTGTTAGATTCTGTAGGGAAGGATAATTGTAATCCTCCTTCTGTTCTTGACATATTGCAAGGTGCCTTCATCTACCAGTTACAATTGCATGCCACAATACTGAGATGTTGTAGTTCAAAACCTGATGACGGAGTATTTATGCCTTACCAGGATTATCCTAACCTAGTTGTCATATGCAGATTAAATCATGCCCTTACCATACGCCACTTTATTTTTCCTATTTGTGAATCATTTGGTAATAACTGCAAGAGACAGGGGATTGCTTGCCATCATCCAAAGTTGATTGTTTTGCAAAGAAAAGATAGTATTCAAATTGTTATTACATCGGCTAATTTGGTGGAAAAGCAGGGGAACAGCTCAAACTGTGGGGACAAGTTCAAATTTTGGGAGGACAGATGGATGGGCGGGGAGGTTTCGTTGATTGCAAGATACCCTAGGTTGTATGTTATATCTTCACAACAAAACCATATCATACAACACATGGGGGTCTTCCGAGATAAAGGGTGGGAATGGGATTTTAGATGGAGGAGACCATTATTCGATAATGAAATAGACATGGCGGTATCATTTCTAAGGGAGGTCGAAGGCCACAGAATTCAGCCTCAGCAAGGTGACCAGTGGGTGTGGAAGGCGGATCCAAGTGGGCAGTACACGGCCAAATCTGCTTATGGTGTCCTATGGGGGGAGATGTTCGAGGAGCAGCAAGATGGAGTTTTCGAGGAGTTATCAGCCGAGGAGAGCGCAGCCCATCTATTCTTTCATTGCAGCTCAAACTGTGACTTCACTGCTCAGTTGGCTGGGTTTATGGCATCTCTTGTTATTGATGTACCCAGCCAGGCTCACTGGATTACTCAGCTTACAAAATATGACTTTGGAGGTCAACAGGACATCTTGTTACTTCAGTACCTGGAATTCACTTTTATAGAACTTCTGTTCTGTCAGAATCTTTTGAGGCTTCTCCTCCAGTTTCTTGGTTCAGTTGTGGCATCTGTGGTTGGTTTGAGCCATCTTTTCCGCACTGTGGCAGACTCAAATAGTGCAAGACTAAAAGAATTCTTTCCTCGGAAAATTGTTTTAAGAAGAAATCCAATTATTTCTGTTGATGAAAATGCTGTTAGTGTTCTTGTTCCCAACCCAGTTCAAACTTTTGAGGGAGTTAGATTTTTCAGGCTATCCATAACGGTAATAATATCTATTCAAAATGGGTTTCTCCTCTTTGGGATGCCAGATTCTTCACGTTTTCTGGATGTTTGTCCAAAAGAGGCACTTACAGCTGCCTTAGGAGAAAGCTGCAATAAAGTACAACTATTTCTAAATTTGTCAGAGATGATGCAACCCGAACAAATTGTGGCGTTTTGCTCACTCATTGCTTCAATTCAAAGATGTTATGGCCTTTGGAGATTACAAGAGATAAATGTTAGGCTTAACTCATTTCTAATATGGTATGGGAGCCTATCTAATCTCTGTGGTAGGCTGCCTGCAAATTTCCAAACCTGTAAATTTAACGGTTCAGATGTTTTGGATGTCCAGTCTTGGGTTCTAAATCAATACAGATGGCCTGAATCATTCAAGTCTGAAATTATATACAGTGCATCTTCTATTGGTTCATCTGCCAATTCAAAATTTCTTGCTGATTTTTCATCTTCTTGGGGCTGCTGGAATGCTAGCGAAGAACTGAAGAATCCTTCTGTTAGGATTATATTCCCCACTATTGAGAGAGTGAAGAATGCTTATAATGGGATTTTGCCTTCAAGATATATTCTTTGTTTCACAGAGGTATACTGTGGGTCTCATAATTTTAGTGCTGCTGCCTGGGGGCGACAAATTTCAAATCCATTTAGGACAAAGGATGATGGACCTAAAAAAGAGGATCCTTCTGTGAATTATGGGTTTCATATTTGCAATTATGAACTTGGGATTATATTTACTTTTCCTCCTACAGAAAATAATGGTTGTCCCGAAGTTAAGAGCCCAAAATTAGAAGATATAACTCTGCCGTTTGTTGCTTTGAGGGAGGTTATGGTTGAACTTGCTGAGCGAGAGAAGGAGAAACATACAGAAGAAGAAATGAAAGATGAGAATGATGAAGAGGAATATGTTGAGCTTCCAGAAGAACTGGAAGCAACCAATTATGTTGAACAGGAGAAGGAAGATGAGAAAGCATATGCTGATATACTCTGGAGTCAGGTTGATTCGTTCCAGAGCAGTTGA
Predicted protein sequences of Glyma.05g198600
>Glyma.05g198600.1.p sequence-type=predicted peptide transcript=Glyma.05g198600.1 locus=Glyma.05g198600 id=Glyma.05g198600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MISFHGNGDDGDGVALLREASNGVLFSVGDRVSLACGNEKGSCGVGNEIEFVVERIDFEECGGEIDGLKTFAGHSQSGKGNKRVFAVTANDPRYEGVVGRARFLQDRCRDILLSNDPVSRILRDESNKVKNLDPKAVADEVPNTVRVLDSVGKDNCNPPSVLDILQGAFIYQLQLHATILRCCSSKPDDGVFMPYQDYPNLVVICRLNHALTIRHFIFPICESFGNNCKRQGIACHHPKLIVLQRKDSIQIVITSANLVEKQGNSSNCGDKFKFWEDRWMGGEVSLIARYPRLYVISSQQNHIIQHMGVFRDKGWEWDFRWRRPLFDNEIDMAVSFLREVEGHRIQPQQGDQWVWKADPSGQYTAKSAYGVLWGEMFEEQQDGVFEELSAEESAAHLFFHCSSNCDFTAQLAGFMASLVIDVPSQAHWITQLTKYDFGGQQDILLLQYLEFTFIELLFCQNLLRLLLQFLGSVVASVVGLSHLFRTVADSNSARLKEFFPRKIVLRRNPIISVDENAVSVLVPNPVQTFEGVRFFRLSITVIISIQNGFLLFGMPDSSRFLDVCPKEALTAALGESCNKVQLFLNLSEMMQPEQIVAFCSLIASIQRCYGLWRLQEINVRLNSFLIWYGSLSNLCGRLPANFQTCKFNGSDVLDVQSWVLNQYRWPESFKSEIIYSASSIGSSANSKFLADFSSSWGCWNASEELKNPSVRIIFPTIERVKNAYNGILPSRYILCFTEVYCGSHNFSAAAWGRQISNPFRTKDDGPKKEDPSVNYGFHICNYELGIIFTFPPTENNGCPEVKSPKLEDITLPFVALREVMVELAEREKEKHTEEEMKDENDEEEYVELPEELEATNYVEQEKEDEKAYADILWSQVDSFQSS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo