SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g195000

Feature Type:gene_model
Chromosome:Gm05
Start:37946508
stop:37948815
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g195000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G01720.1AT ANAC002,ATAF1 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
PTHR31719PantherFam NAC TRANSCRIPTION FACTOR 56 JGI N/AIEA
PF02365Pfam No apical meristem (NAM) protein JGI N/AIEA

Proteins Associated with Glyma.05g195000
LocusGene SymbolProtein Name
NAC030 NAC Transcription Factor gene 30

Gene model name correspondences to Glyma.05g195000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g32850 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g195000
>Glyma.05g195000.1 sequence-type=CDS polypeptide=Glyma.05g195000.1.p locus=Glyma.05g195000 id=Glyma.05g195000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCAGGAGAACTCCAATTACCACCCGGGTTCAGATTCCACCCCACTGACGATGAGCTTGTGAATCACTACTTGTGTAGAAAGTGTGCTGCACAAACCATTGCTGTTCCCATCATCAAAGAAATCGATTTGTACAAGTTTGATCCATGGCAGCTTCCAGAGATGGCTCTTTACGGTGAGAAAGAGTGGTACTTTTTCTCTCCTCGAGACCGAAAATACCCAAACGGTTCGAGACCGAACCGGGCTGCCGGAAGCGGGTACTGGAAGGCTACCGGAGCTGACAAACCGATCGGAAAACCGAAAGCCCTTGGAATCAAGAAGGCCCTCGTGTTCTACGCGGGCAAAGCCCCAAAGGGAGTGAAGACCAATTGGATCATGCACGAATATCGCTTAGCCAACGTCGACAGATCCGCCTCAAAAAAAAACACCACCACCAACAACTTGAGGCTTGATGATTGGGTTTTGTGCCGAATTTACAACAAGAAAGGGAAGATTGAGAAGTACAATGGTGTTGCGGTGGTGGATCAGAAAGTGGCCAAGTTATCAGAAGAGGAGGTTCAGTTCCAGCACGAGACCAAGCCTCAGATCAAGATGTACGGCCACGATGATTTCAGGAACGACCAATTGTACATGGACACGTCGGATTCGGGGCCCAGGTTGCACACGGACTCCAGCTGCTCCGAGCACGTGGTTTCGCCCGATGGCACGTGCGAGAAGGAGGTGCAGAGCGAGCCCAAGTGGAATGATCTTGAGTTGGGCCCCGACCCAGCCTTGGGCTTCGATTTTAATTTCATGGACCTGACCTCAGATGACGCTTTTGCCCCTCAGGTTCAATACCAAATCAACCATCTCTCACCGTGGCAAGAAATGTTCACGTACCTACCAAAGACATTTTGA
Predicted protein sequences of Glyma.05g195000
>Glyma.05g195000.1.p sequence-type=predicted peptide transcript=Glyma.05g195000.1 locus=Glyma.05g195000 id=Glyma.05g195000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPGELQLPPGFRFHPTDDELVNHYLCRKCAAQTIAVPIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKALGIKKALVFYAGKAPKGVKTNWIMHEYRLANVDRSASKKNTTTNNLRLDDWVLCRIYNKKGKIEKYNGVAVVDQKVAKLSEEEVQFQHETKPQIKMYGHDDFRNDQLYMDTSDSGPRLHTDSSCSEHVVSPDGTCEKEVQSEPKWNDLELGPDPALGFDFNFMDLTSDDAFAPQVQYQINHLSPWQEMFTYLPKTF*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo