SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g188200

Feature Type:gene_model
Chromosome:Gm05
Start:37442535
stop:37446277
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g188200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G09820.2AT JGI N/AIEA
PTHR31906PantherFam PLASTID-LIPID-ASSOCIATED PROTEIN 4, CHLOROPLASTIC-RELATED JGI N/AIEA
PTHR31906:SF4PantherFam FIBRILLIN-5, CHLOROPLASTIC JGI N/AIEA
PF04755Pfam PAP_fibrillin JGI N/AIEA

Gene model name correspondences to Glyma.05g188200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g32170 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g188200
>Glyma.05g188200.2 sequence-type=CDS polypeptide=Glyma.05g188200.2.p locus=Glyma.05g188200 id=Glyma.05g188200.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTCACTAAGCTAGTTCAGCCACCAATGACAGATTCCCATGTGAGTCCTCTTATTTGTAGAACCATGAATGCCATGAAACTCCAAAATTTTGTTCCATCTAGAAATCATTCAAGAATAAACACTTCAAGATTTGGTGAGAGACCATTATGGTTTAGACCCATTACAATCATTAAAGTTGCAGAACACAATCCTGGCTCAGGCTTAGCTGAGCTTGAAACACTTGCTCAGAAGAAAAGAGAGCTTTGCCAGGCGGTGGAAGGAATCAACAGGGGAATTTTTGGAATCCCAGCTACCAAGAAATCTGAAATTGAAAGATTGGTGAAGCAGATAGAATCTCTGAATCCAACTCCATGCCCAACTCTAGAACTGGAGAAGGTGGCTGGGTGCTGGAGGCTTGTTTACAGTACGATCTCAATTTTGGGATCAAAGAGGACCAAATTAGGCCTCAGAGACTTCATCTCATTGGATGATTTTTTTCAGACGATTGACATATCCAAGAGCAAAGCAGTTAATGTGATAAAGTTCAGTGCAATGGGATTGAGTTTGTTGTCTGGACAGCTTAATATTGAAGCCTCTTTCAGGATTGCTTCCTCAACAAGGGTTGACATTAATTTCGAAAACTCAACGATCACTCCTGACCGGTTGATGAATGTATTTCGGAAAAATTATGATCTTTTGTTGGGCATCTTCAATCCAGAGGGATGGCTGGAAATCACATATGTTGATGATACCTTGAGAATAGGAAGGGACGACAAAAGCAATATCTTTGTGCTGGAAAGATTTGATGATAGTAATAACACGTAG

>Glyma.05g188200.7 sequence-type=CDS polypeptide=Glyma.05g188200.7.p locus=Glyma.05g188200 id=Glyma.05g188200.7.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTCACTAAGCTAGTTCAGCCACCAATGACAGATTCCCATGTGAGTCCTCTTATTTGTAGAACCATGAATGCCATGAAACTCCAAAATTTTGTTCCATCTAGAAATCATTCAAGAATAAACACTTCAAGATTTGGTGAGAGACCATTATGGTTTAGACCCATTACAATCATTAAAGTTGCAGAACACAATCCTGGCTCAGGCTTAGCTGAGCTTGAAACACTTGCTCAGAAGAAAAGAGAGCTTTGCCAGGCGGTGGAAGGAATCAACAGGGGAATTTTTGGAATCCCAGCTACCAAGAAATCTGAAATTGAAAGATTGGTGAAGCAGATAGAATCTCTGAATCCAACTCCATGCCCAACTCTAGAACTGGAGAAGGTGGCTGGGTGCTGGAGGCTTGTTTACAGTACGATCTCAATTTTGGGATCAAAGAGGACCAAATTAGGCCTCAGAGACTTCATCTCATTGGATGATTTTTTTCAGACGATTGACATATCCAAGAGCAAAGCAGTTAATGTGATAAAGTTCAGTGCAATGGGATTGAGTTTGTTGTCTGGACAGCTTAATATTGAAGCCTCTTTCAGGATTGCTTCCTCAACAAGGGTTGACATTAATTTCGAAAACTCAACGATCACTCCTGACCGGTTGATGAATGTATTTCGGAAAAATTATGATCTTTTGTTGGGCATCTTCAATCCAGAGGGATGGCTGGAAATCACGTATCCTAATTCTTTGAAGATTTTTCTTCTTCTTTTCTTTTATTGGTCTAATTTTGAGGTCCAACCCATATCTACTCTTTTTGACGAGCCCAAATCATGTCTTTCTTTGTTTTCTCATGCTTTTTATTATTGA
Predicted protein sequences of Glyma.05g188200
>Glyma.05g188200.2.p sequence-type=predicted peptide transcript=Glyma.05g188200.2 locus=Glyma.05g188200 id=Glyma.05g188200.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVTKLVQPPMTDSHVSPLICRTMNAMKLQNFVPSRNHSRINTSRFGERPLWFRPITIIKVAEHNPGSGLAELETLAQKKRELCQAVEGINRGIFGIPATKKSEIERLVKQIESLNPTPCPTLELEKVAGCWRLVYSTISILGSKRTKLGLRDFISLDDFFQTIDISKSKAVNVIKFSAMGLSLLSGQLNIEASFRIASSTRVDINFENSTITPDRLMNVFRKNYDLLLGIFNPEGWLEITYVDDTLRIGRDDKSNIFVLERFDDSNNT*

>Glyma.05g188200.7.p sequence-type=predicted peptide transcript=Glyma.05g188200.7 locus=Glyma.05g188200 id=Glyma.05g188200.7.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVTKLVQPPMTDSHVSPLICRTMNAMKLQNFVPSRNHSRINTSRFGERPLWFRPITIIKVAEHNPGSGLAELETLAQKKRELCQAVEGINRGIFGIPATKKSEIERLVKQIESLNPTPCPTLELEKVAGCWRLVYSTISILGSKRTKLGLRDFISLDDFFQTIDISKSKAVNVIKFSAMGLSLLSGQLNIEASFRIASSTRVDINFENSTITPDRLMNVFRKNYDLLLGIFNPEGWLEITYPNSLKIFLLLFFYWSNFEVQPISTLFDEPKSCLSLFSHAFYY*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo