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Report for Sequence Feature Glyma.05g187000

Feature Type:gene_model
Chromosome:Gm05
Start:37348732
stop:37356954
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g187000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G09880.1AT JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
K13091KEGG Spliceosome JGI N/AIEA
KOG0147 KOG Transcriptional coactivator CAPER (RRM superfamily) JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF15519Pfam linker between RRM2 and RRM3 domains in RBM39 protein JGI N/AIEA

Gene model name correspondences to Glyma.05g187000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g32080 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g187000
>Glyma.05g187000.1 sequence-type=CDS polypeptide=Glyma.05g187000.1.p locus=Glyma.05g187000 id=Glyma.05g187000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACTTCGACGAGTACGAATACCTGGAGAAGACAGTGGAGGAAGACATAGATAAAGACTCCTCCAAGAAGAAGAAGGACATCACCGACAAGAGCGAGAGGAGTTACCGGAAGCCCCGCGACGTCGACGACGATCTCGACGCCGATGACAGAAAGAGCAAGAGGTCAAGGGGCGACGACGAGAACGGTGGTTCCAAGAAAGATCGCGACAGAGACAGAGAAAGAGACCGTGACCGCGAACGTTCCTCCGGCCGTCACAGGAGCGAGAGGGAGAGAGACGGAGAGAGGAAAGACAGGGATAAGGATAGAGAGAGGAGGGATAAGGATAAGGATAAGGATAGGGATAGGGATAGGGATAGGAGAGACCGTGATAGGGACGGAGATAGGGAAAAGGAGCGCGAGAGAAGAGACAAGGATAAGGAGAGAGAGGGGGAAAAAGAGGCGAGGGAGAGATCCACAAGGAGCAGGAGTCGCTCCGAGAGGGACAGAGACAGGGAGCGAGATTTCGAAATGCGCGATGGCCGGAGATTTAGGGTTAAGAAAGAGGCCTCAGAACCTGAGGCTGACCCAGAAAGGGATCAGAGAACTGTTTTTGCCTACCAGATGCCGTTAAAAGCAACAGAGAGAGATGTGTATGAGTTCTTTTCAAAAGCTGGCAAGGTGAGAGATGTCCGTCTGATCATGGATAGGAACTCAAGACGATCTAAAGGAGTTGGGTATATTGAATTTTATGATGCGATGTCAGTGCCAATGGCTATTGCTCTCTCTGGCCAACTTCTTCTTGGGCAACCTGTAATGGTGAAACCTTCTGAAGCTGAAAAGAACCTTGTTCAATCTAATGCTTCTGGTGGAGCGGCCGGTGTAGCTGGGCCCTATGGAGCTGTGGACAGAAAATTGTATGTGGGAAATCTTCACTTCAACATGACTGAGAGTCAGCTGCGGGAGATTTTTGAACCATTTGGTCCGGTTGAGGTTGTCCAACTGCCTCTTGATTTGGAAACAGGACACTGCAAGGGTTTTGGGTTTGTTCAATTTACTCATCTAGAACATGCCAAGGCTGCTCAGAGTTTAAATGGAAAATTGGAGATTGCTGGCAGGACTATCAAGGTTTCATGTGTAACAGATCATGTTGCAAGCCAAGATGCAACTGCAAAATCTGCAGACTTGGATGACGATGAAGGTGGATTGACTTTAAATGCTCACTCAAGAGCATTGCTTATGCAGAGGCTGGCTGGCGCAGACCCTGCAAGCATAGGTTTGCCTGTTGTGAATGGCTCAGTTCCTGCTCAGCAGGCTATCAGCTTGCCTATTGGTGCACCAGTTCTACCAACGCTAGTCATGCCTAATCCAGTGGTAGAACCTGTAGGAAACCCCAGCGAGTGTTTACTTTTAAAGAATATGTTTGATCCGAGCACTGAGACGGAACCAGATTTTGATATAGACATTAAAGAGGACGTAGAGGAAGAGTGTTCTAAATATGGCCGAGTGAAGCATATTTTTGTTGACAAAAAAAGTGCAGGTTTTGTGTATTTGCGGTTTGATACAGTGGAAGCAGCAAGTGCTGCTCAACATGCAATGCACTTGAGATGGTTTGCACGCAGGTTAATTTCTGCTGTCTTCATGCAACCAGAGTTGTACGAAGCCAAGTTTAAAGGGGAAGTTTGA

>Glyma.05g187000.3 sequence-type=CDS polypeptide=Glyma.05g187000.3.p locus=Glyma.05g187000 id=Glyma.05g187000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACTTCGACGAGTACGAATACCTGGAGAAGACAGTGGAGGAAGACATAGATAAAGACTCCTCCAAGAAGAAGAAGGACATCACCGACAAGAGCGAGAGGAGTTACCGGAAGCCCCGCGACGTCGACGACGATCTCGACGCCGATGACAGAAAGAGCAAGAGGTCAAGGGGCGACGACGAGAACGGTGGTTCCAAGAAAGATCGCGACAGAGACAGAGAAAGAGACCGTGACCGCGAACGTTCCTCCGGCCGTCACAGGAGCGAGAGGGAGAGAGACGGAGAGAGGAAAGACAGGGATAAGGATAGAGAGAGGAGGGATAAGGATAAGGATAAGGATAGGGATAGGGATAGGGATAGGAGAGACCGTGATAGGGACGGAGATAGGGAAAAGGAGCGCGAGAGAAGAGACAAGGATAAGGAGAGAGAGGGGGAAAAAGAGGCGAGGGAGAGATCCACAAGGAGCAGGAGTCGCTCCGAGAGGGACAGAGACAGGGAGCGAGATTTCGAAATGCGCGATGGCCGGAGATTTAGGGTTAAGAAAGAGGCCTCAGAACCTGAGGCTGACCCAGAAAGGGATCAGAGAACTGTTTTTGCCTACCAGATGCCGTTAAAAGCAACAGAGAGAGATGTGTATGAGTTCTTTTCAAAAGCTGGCAAGGTGAGAGATGTCCGTCTGATCATGGATAGGAACTCAAGACGATCTAAAGGAGTTGGGCTAAATGAAACTCAGCTTGAGCTGTCTGCACTAGAGTTTTTGTTTCCCTACATCTCTTTGCTGTATATTGAATTTTATGATGCGATGTCAGTGCCAATGGCTATTGCTCTCTCTGGCCAACTTCTTCTTGGGCAACCTGTAATGGTGAAACCTTCTGAAGCTGAAAAGAACCTTGTTCAATCTAATGCTTCTGGTGGAGCGGCCGGTGTAGCTGGGCCCTATGGAGCTGTGGACAGAAAATTGTATGTGGGAAATCTTCACTTCAACATGACTGAGAGTCAGCTGCGGGAGATTTTTGAACCATTTGGTCCGGTTGAGGTTGTCCAACTGCCTCTTGATTTGGAAACAGGACACTGCAAGGGTTTTGGGTTTGTTCAATTTACTCATCTAGAACATGCCAAGGCTGCTCAGAGTTTAAATGGAAAATTGGAGATTGCTGGCAGGACTATCAAGGTTTCATGTGTAACAGATCATGTTGCAAGCCAAGATGCAACTGCAAAATCTGCAGACTTGGATGACGATGAAGGTGGATTGACTTTAAATGCTCACTCAAGAGCATTGCTTATGCAGAGGCTGGCTGGCGCAGACCCTGCAAGCATAGGTTTGCCTGTTGTGAATGGCTCAGTTCCTGCTCAGCAGGCTATCAGCTTGCCTATTGGTGCACCAGTTCTACCAACGCTAGTCATGCCTAATCCAGTGGTAGAACCTGTAGGAAACCCCAGCGAGTGTTTACTTTTAAAGAATATGTTTGATCCGAGCACTGAGACGGAACCAGATTTTGATATAGACATTAAAGAGGACGTAGAGGAAGAGTGTTCTAAATATGGCCGAGTGAAGCATATTTTTGTTGACAAAAAAAGTGCAGGTTTTGTGTATTTGCGGTTTGATACAGTGGAAGCAGCAAGTGCTGCTCAACATGCAATGCACTTGAGATGGTTTGCACGCAGGTTAATTTCTGCTGTCTTCATGCAACCAGAGTTGTACGAAGCCAAGTTTAAAGGGGAAGTTTGA

>Glyma.05g187000.4 sequence-type=CDS polypeptide=Glyma.05g187000.4.p locus=Glyma.05g187000 id=Glyma.05g187000.4.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACTTCGACGAGTACGAATACCTGGAGAAGACAGTGGAGGAAGACATAGATAAAGACTCCTCCAAGAAGAAGAAGGACATCACCGACAAGAGCGAGAGGAGTTACCGGAAGCCCCGCGACGTCGACGACGATCTCGACGCCGATGACAGAAAGAGCAAGAGGTCAAGGGGCGACGACGAGAACGGTGGTTCCAAGAAAGATCGCGACAGAGACAGAGAAAGAGACCGTGACCGCGAACGTTCCTCCGGCCGTCACAGGAGCGAGAGGGAGAGAGACGGAGAGAGGAAAGACAGGGATAAGGATAGAGAGAGGAGGGATAAGGATAAGGATAAGGATAGGGATAGGGATAGGGATAGGAGAGACCGTGATAGGGACGGAGATAGGGAAAAGGAGCGCGAGAGAAGAGACAAGGATAAGGAGAGAGAGGGGGAAAAAGAGGCGAGGGAGAGATCCACAAGGAGCAGGAGTCGCTCCGAGAGGGACAGAGACAGGGAGCGAGATTTCGAAATGCGCGATGGCCGGAGATTTAGGGTTAAGAAAGAGGCCTCAGAACCTGAGGCTGACCCAGAAAGGGATCAGAGAACTGTTTTTGCCTACCAGATGCCGTTAAAAGCAACAGAGAGAGATGTGTATGAGTTCTTTTCAAAAGCTGGCAAGGTGAGAGATGTCCGTCTGATCATGGATAGGAACTCAAGACGATCTAAAGGAGTTGGGTATATTGAATTTTATGATGCGATGTCAGTGCCAATGGCTATTGCTCTCTCTGGCCAACTTCTTCTTGGGCAACCTGTAATGGTGAAACCTTCTGAAGCTGAAAAGAACCTTGTTCAATCTAATGCTTCTGGTGGAGCGGCCGGTGTAGCTGGGCCCTATGGAGCTGTGGACAGAAAATTGTATGTGGGAAATCTTCACTTCAACATGACTGAGAGTCAGCTGCGGGAGATTTTTGAACCATTTGGTCCGGTTGAGGTTGTCCAACTGCCTCTTGATTTGGAAACAGGACACTGCAAGGGTTTTGGGTTTGTTCAATTTACTCATCTAGAACATGCCAAGGCTGCTCAGAGTTTAAATGGAAAATTGGAGATTGCTGGCAGGACTATCAAGGTTTCATGTGTAACAGATCATGTTGCAAGCCAAGATGCAACTGCAAAATCTGCAGACTTGGATGACGATGAAGGTGGATTGACTTTAAATGCTCACTCAAGAGCATTGCTTATGCAGAGGCTGGCTGGCGCAGACCCTGCAAGCATAGGTTTGCCTGTTGTGAATGGCTCAGTTCCTGCTCAGCAGGCTATCAGCTTGCCTATTGGTGCACCAGTTCTACCAACGCTAGTCATGCCTAATCCAGTGGTAGAACCTGTAGGAAACCCCAGCGAGTGTTTACTTTTAAAGAATATGTTTGATCCGAGCACTGAGACGGAACCAGATTTTGATATAGACATTAAAGAGGACGTAGAGGAAGAGTGTTCTAAATATGGCCGAGTGAAGCATATTTTTGTTGACAAGTAA

>Glyma.05g187000.5 sequence-type=CDS polypeptide=Glyma.05g187000.5.p locus=Glyma.05g187000 id=Glyma.05g187000.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCCGTTAAAAGCAACAGAGAGAGATGTGTATGAGTTCTTTTCAAAAGCTGGCAAGGTGAGAGATGTCCGTCTGATCATGGATAGGAACTCAAGACGATCTAAAGGAGTTGGGTATATTGAATTTTATGATGCGATGTCAGTGCCAATGGCTATTGCTCTCTCTGGCCAACTTCTTCTTGGGCAACCTGTAATGGTGAAACCTTCTGAAGCTGAAAAGAACCTTGTTCAATCTAATGCTTCTGGTGGAGCGGCCGGTGTAGCTGGGCCCTATGGAGCTGTGGACAGAAAATTGTATGTGGGAAATCTTCACTTCAACATGACTGAGAGTCAGCTGCGGGAGATTTTTGAACCATTTGGTCCGGTTGAGGTTGTCCAACTGCCTCTTGATTTGGAAACAGGACACTGCAAGGGTTTTGGGTTTGTTCAATTTACTCATCTAGAACATGCCAAGGCTGCTCAGAGTTTAAATGGAAAATTGGAGATTGCTGGCAGGACTATCAAGGTTTCATGTGTAACAGATCATGTTGCAAGCCAAGATGCAACTGCAAAATCTGCAGACTTGGATGACGATGAAGGTGGATTGACTTTAAATGCTCACTCAAGAGCATTGCTTATGCAGAGGCTGGCTGGCGCAGACCCTGCAAGCATAGGTTTGCCTGTTGTGAATGGCTCAGTTCCTGCTCAGCAGGCTATCAGCTTGCCTATTGGTGCACCAGTTCTACCAACGCTAGTCATGCCTAATCCAGTGGTAGAACCTGTAGGAAACCCCAGCGAGTGTTTACTTTTAAAGAATATGTTTGATCCGAGCACTGAGACGGAACCAGATTTTGATATAGACATTAAAGAGGACGTAGAGGAAGAGTGTTCTAAATATGGCCGAGTGAAGCATATTTTTGTTGACAAAAAAAGTGCAGGTTTTGTGTATTTGCGGTTTGATACAGTGGAAGCAGCAAGTGCTGCTCAACATGCAATGCACTTGAGATGGTTTGCACGCAGCAACCAGAGTTGTACGAAGCCAAGTTTAAAGGGGAAGTTTGAAGTTCATACATGCCTCGAGGCTCCTGAAGATACAATATGCATTATTTTGTGGTCTTAG
Predicted protein sequences of Glyma.05g187000
>Glyma.05g187000.1.p sequence-type=predicted peptide transcript=Glyma.05g187000.1 locus=Glyma.05g187000 id=Glyma.05g187000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDFDEYEYLEKTVEEDIDKDSSKKKKDITDKSERSYRKPRDVDDDLDADDRKSKRSRGDDENGGSKKDRDRDRERDRDRERSSGRHRSERERDGERKDRDKDRERRDKDKDKDRDRDRDRRDRDRDGDREKERERRDKDKEREGEKEARERSTRSRSRSERDRDRERDFEMRDGRRFRVKKEASEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGVAGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVEVVQLPLDLETGHCKGFGFVQFTHLEHAKAAQSLNGKLEIAGRTIKVSCVTDHVASQDATAKSADLDDDEGGLTLNAHSRALLMQRLAGADPASIGLPVVNGSVPAQQAISLPIGAPVLPTLVMPNPVVEPVGNPSECLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYGRVKHIFVDKKSAGFVYLRFDTVEAASAAQHAMHLRWFARRLISAVFMQPELYEAKFKGEV*

>Glyma.05g187000.3.p sequence-type=predicted peptide transcript=Glyma.05g187000.3 locus=Glyma.05g187000 id=Glyma.05g187000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDFDEYEYLEKTVEEDIDKDSSKKKKDITDKSERSYRKPRDVDDDLDADDRKSKRSRGDDENGGSKKDRDRDRERDRDRERSSGRHRSERERDGERKDRDKDRERRDKDKDKDRDRDRDRRDRDRDGDREKERERRDKDKEREGEKEARERSTRSRSRSERDRDRERDFEMRDGRRFRVKKEASEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGLNETQLELSALEFLFPYISLLYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGVAGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVEVVQLPLDLETGHCKGFGFVQFTHLEHAKAAQSLNGKLEIAGRTIKVSCVTDHVASQDATAKSADLDDDEGGLTLNAHSRALLMQRLAGADPASIGLPVVNGSVPAQQAISLPIGAPVLPTLVMPNPVVEPVGNPSECLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYGRVKHIFVDKKSAGFVYLRFDTVEAASAAQHAMHLRWFARRLISAVFMQPELYEAKFKGEV*

>Glyma.05g187000.4.p sequence-type=predicted peptide transcript=Glyma.05g187000.4 locus=Glyma.05g187000 id=Glyma.05g187000.4.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDFDEYEYLEKTVEEDIDKDSSKKKKDITDKSERSYRKPRDVDDDLDADDRKSKRSRGDDENGGSKKDRDRDRERDRDRERSSGRHRSERERDGERKDRDKDRERRDKDKDKDRDRDRDRRDRDRDGDREKERERRDKDKEREGEKEARERSTRSRSRSERDRDRERDFEMRDGRRFRVKKEASEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGVAGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVEVVQLPLDLETGHCKGFGFVQFTHLEHAKAAQSLNGKLEIAGRTIKVSCVTDHVASQDATAKSADLDDDEGGLTLNAHSRALLMQRLAGADPASIGLPVVNGSVPAQQAISLPIGAPVLPTLVMPNPVVEPVGNPSECLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYGRVKHIFVDK*

>Glyma.05g187000.5.p sequence-type=predicted peptide transcript=Glyma.05g187000.5 locus=Glyma.05g187000 id=Glyma.05g187000.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGVAGPYGAVDRKLYVGNLHFNMTESQLREIFEPFGPVEVVQLPLDLETGHCKGFGFVQFTHLEHAKAAQSLNGKLEIAGRTIKVSCVTDHVASQDATAKSADLDDDEGGLTLNAHSRALLMQRLAGADPASIGLPVVNGSVPAQQAISLPIGAPVLPTLVMPNPVVEPVGNPSECLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYGRVKHIFVDKKSAGFVYLRFDTVEAASAAQHAMHLRWFARSNQSCTKPSLKGKFEVHTCLEAPEDTICIILWS*






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