SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g180900

Feature Type:gene_model
Chromosome:Gm05
Start:36908615
stop:36911230
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g180900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G39810.1AT JGI N/AIEA
2.7.7.7EC DNA-directed DNA polymerase JGI N/AIEA
PTHR30231PantherFam DNA POLYMERASE III SUBUNIT EPSILON JGI N/AIEA
PF00929Pfam Exonuclease JGI N/AIEA

Gene model name correspondences to Glyma.05g180900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g31480 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g180900
>Glyma.05g180900.1 sequence-type=CDS polypeptide=Glyma.05g180900.1.p locus=Glyma.05g180900 id=Glyma.05g180900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACGTCTCTAATTCATGCAATGAACAACAAGCACTCGAGATCGTTTTCTTTGATTTGGAAACTACAGTACCCAAAAGGGGTGGAGAGCGTTTCTGGGTTCTGGAGTTTGGTGCTATTGTAGTTACACCCCACAAACTCACCGAGATTGAGAGCTACACCACGCTGATAAGACCCAAAGACCTATCTGTGGTCTCAGTGAAATCCAGCAGAAGTGATGGAATAACTCGTAAAGCCGTTGAAAATGCACCATCTTTTGAAGATGTTGCAGACAGAATATTCAGTATCTTGAATGGAAGGGTGTGGGCGGGGCATAACATCCAGAGATTTGACTGTGTTCGAATCAAAGAGGCCTTTAATGATATCAATAGGTCAGCACCGGTTCCCGTTGGAATCATTGATTCTTTGGGGGTTCTAACTGAGAAGTTTGGAAGAAGAGCTGGTAACATGAAGATGGCAACACTGGCTTCTTATTTTGGCCTGGGCCAACAAAAACACAGCAGGAGTCTGGATGATGTTCGCATGAACTTGGAGGTGCTTAAGCACTGTGCAACGGTGTTGTTTCTGGAATCTAGTCTACCAAACACATTGCATAGCAAATGGTATGGATCTTCCAGCGTTATGACGCGAAGCAGAAGCGATGGGAAATCTCCCTGCAAGGAAGAGACTAGCAGAAAATCTCCCCCAACTTCATATGGATATCAGAGGACAGTTCCCTATGCTAGGGGAAGTTTGGGAAAGGTGACCGAAAGAGTGAAGGGATTGTTGTGTAAAGCACAAGGGCAACCACCACTTCAACATCTACTCAAGCATTCTCATTCATTACTAAGGTGA

>Glyma.05g180900.2 sequence-type=CDS polypeptide=Glyma.05g180900.2.p locus=Glyma.05g180900 id=Glyma.05g180900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACGTCTCTAATTCATGCAATGAACAACAAGCACTCGAGATCGTTTTCTTTGATTTGGAAACTACAGTACCCAAAAGGGGTGGAGAGCGTTTCTGGGTTCTGGAGTTTGGTGCTATTGTAGTTACACCCCACAAACTCACCGAGATTGAGAGCTACACCACGCTGATAAGACCCAAAGACCTATCTGTGGTCTCAGTGAAATCCAGCAGAAGTGATGGAATAACTCGTAAAGCCGTTGAAAATGCACCATCTTTTGAAGATGTTGCAGACAGAATATTCAGTATCTTGAATGGAAGGGTGTGGGCGGGGCATAACATCCAGAGATTTGACTGTGTTCGAATCAAAGAGGCCTTTAATGATATCAATAGGTCAGCACCGGTTCCCGTTGGAATCATTGATTCTTTGGGGGTTCTAACTGAGAAGTTTGGAAGAAGAGCTGGTAACATGAAGATGGCAACACTGGCTTCTTATTTTGGCCTGGGCCAACAAAAACACAGGAGTCTGGATGATGTTCGCATGAACTTGGAGGTGCTTAAGCACTGTGCAACGGTGTTGTTTCTGGAATCTAGTCTACCAAACACATTGCATAGCAAATGGTATGGATCTTCCAGCGTTATGACGCGAAGCAGAAGCGATGGGAAATCTCCCTGCAAGGAAGAGACTAGCAGAAAATCTCCCCCAACTTCATATGGATATCAGAGGACAGTTCCCTATGCTAGGGGAAGTTTGGGAAAGGTGACCGAAAGAGTGAAGGGATTGTTGTGTAAAGCACAAGGGCAACCACCACTTCAACATCTACTCAAGCATTCTCATTCATTACTAAGGTGA
Predicted protein sequences of Glyma.05g180900
>Glyma.05g180900.1.p sequence-type=predicted peptide transcript=Glyma.05g180900.1 locus=Glyma.05g180900 id=Glyma.05g180900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDVSNSCNEQQALEIVFFDLETTVPKRGGERFWVLEFGAIVVTPHKLTEIESYTTLIRPKDLSVVSVKSSRSDGITRKAVENAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRIKEAFNDINRSAPVPVGIIDSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHSRSLDDVRMNLEVLKHCATVLFLESSLPNTLHSKWYGSSSVMTRSRSDGKSPCKEETSRKSPPTSYGYQRTVPYARGSLGKVTERVKGLLCKAQGQPPLQHLLKHSHSLLR*

>Glyma.05g180900.2.p sequence-type=predicted peptide transcript=Glyma.05g180900.2 locus=Glyma.05g180900 id=Glyma.05g180900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDVSNSCNEQQALEIVFFDLETTVPKRGGERFWVLEFGAIVVTPHKLTEIESYTTLIRPKDLSVVSVKSSRSDGITRKAVENAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRIKEAFNDINRSAPVPVGIIDSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHRSLDDVRMNLEVLKHCATVLFLESSLPNTLHSKWYGSSSVMTRSRSDGKSPCKEETSRKSPPTSYGYQRTVPYARGSLGKVTERVKGLLCKAQGQPPLQHLLKHSHSLLR*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo