SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g178800

Feature Type:gene_model
Chromosome:Gm05
Start:36687026
stop:36690477
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g178800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G39860.1AT JGI N/AIEA
1.14.11.33EC DNA oxidative demethylase JGI N/AIEA
PTHR31132PantherFam N-LYSINE METHYLTRANSFERASE JGI N/AIEA
PF13266Pfam Protein of unknown function (DUF4057) JGI N/AIEA

Gene model name correspondences to Glyma.05g178800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g31260 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g178800
>Glyma.05g178800.1 sequence-type=CDS polypeptide=Glyma.05g178800.1.p locus=Glyma.05g178800 id=Glyma.05g178800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCAGAGCCAGAGAACCACGCCGCTAAGGAACCCTCACACCTCCACCTCCGATCTCCTAACGTGGTCCGAACAACCTCCGCCGGAATCCTCCGCCTCCGGCTACCGCTCTCGCCAGCCTTCTGATAAAATCGGTGAGGTTCTCCGCGGAAGCCAGCTCACCGATGAAGAAGCACAGAGTCTAACAAAAAAGAAACCCTGCTCAGGATATAAATTGAAAGAGATGACTGGAAGTGGTATATTTTCTGGTAAATCTGAAGATACCACATCAGAAGAAAATTCTGCAAATTCAAAAAACAGAACAAGCATACGCGTATATAAGCAAGCAATGAATGGAATCAGTCAGATATCATTCAGCACTGAAGGAAACATTTCTCCTAAAAAACCAACCTCTCTACCCGAGATAGCAAAGCAACGTGAACTTGGTGGAACATATCAAAGCAAAACAGTCACGAAGATCAACAAGCAAACATCAAGTGCCAAGACCAAGGAGCTCAGTGGAAGTGATATATTTGCCCCTCCTTCTGAAATTGTGCCTCGTTCATTGGCTGCTGCACACACTTTGGAATCAAAAGAAAGTAAAGACACAAGAAGATCTGTTCCACAAAAAGTGAGTACATCTGCGCAAGTTTCTAATCGAGCTGATGGCCAAAGTAATTTCTCATTCAGTGAACAACCAGTTAAGATATTGAGGAAAAAAATGCATGACCAGAAGTTTGCAGAGATGACAGGCAATAATATTTTCAAGGGAGACGTTCCTGCAGGATCACCGGAAAAGCCTTCAAGCAGAGCTAAACTTAGAGAAATGGCTGGGAGTGACATATTTGCCGATGGAAAGGCAGAAAGTAGAGACCATATACTAGGTGCCCGCAGACCCCCCGGTGGAGGAAGCGGCATTGCCCTCGTTTAA

>Glyma.05g178800.2 sequence-type=CDS polypeptide=Glyma.05g178800.2.p locus=Glyma.05g178800 id=Glyma.05g178800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCAGAGCCAGAGAACCACGCCGCTAAGGAACCCTCACACCTCCACCTCCGATCTCCTAACGTGGTCCGAACAACCTCCGCCGGAATCCTCCGCCTCCGGCTACCGCTCTCGCCAGCCTTCTGATAAAATCGGTGAGGTTCTCCGCGGAAGCCAGCTCACCGATGAAGAAGCACAGAGTCTAACAAAAAAGAAACCCTGCTCAGGATATAAATTGAAAGAGATGACTGGAAGTGGTATATTTTCTGGTAAATCTGAAGATACCACATCAGAAGAAAATTCTGCAAATTCAAAAAACAGAACAAGCATACGCGTATATAAGCAAGCAATGAATGGAATCAGTCAGATATCATTCAGCACTGAAGGAAACATTTCTCCTAAAAAACCAACCTCTCTACCCGAGATAGCAAAGCAACGTGAACTTGGTGGAACATATCAAAGCAAAACAGTCACGAAGATCAACAAGCAAACATCAAGTGCCAAGACCAAGGAGCTCAGTGGAAGTGATATATTTGCCCCTCCTTCTGAAATTGTGCCTCGTTCATTGGCTGCTGCACACACTTTGGAATCAAAAGAAAGTAAAGACACAAGAAGATCTGTTCCACAAAAACGAGCTGATGGCCAAAGTAATTTCTCATTCAGTGAACAACCAGTTAAGATATTGAGGAAAAAAATGCATGACCAGAAGTTTGCAGAGATGACAGGCAATAATATTTTCAAGGGAGACGTTCCTGCAGGATCACCGGAAAAGCCTTCAAGCAGAGCTAAACTTAGAGAAATGGCTGGGAGTGACATATTTGCCGATGGAAAGGCAGAAAGTAGAGACCATATACTAGGTGCCCGCAGACCCCCCGGTGGAGGAAGCGGCATTGCCCTCGTTTAA
Predicted protein sequences of Glyma.05g178800
>Glyma.05g178800.1.p sequence-type=predicted peptide transcript=Glyma.05g178800.1 locus=Glyma.05g178800 id=Glyma.05g178800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MQSQRTTPLRNPHTSTSDLLTWSEQPPPESSASGYRSRQPSDKIGEVLRGSQLTDEEAQSLTKKKPCSGYKLKEMTGSGIFSGKSEDTTSEENSANSKNRTSIRVYKQAMNGISQISFSTEGNISPKKPTSLPEIAKQRELGGTYQSKTVTKINKQTSSAKTKELSGSDIFAPPSEIVPRSLAAAHTLESKESKDTRRSVPQKVSTSAQVSNRADGQSNFSFSEQPVKILRKKMHDQKFAEMTGNNIFKGDVPAGSPEKPSSRAKLREMAGSDIFADGKAESRDHILGARRPPGGGSGIALV*

>Glyma.05g178800.2.p sequence-type=predicted peptide transcript=Glyma.05g178800.2 locus=Glyma.05g178800 id=Glyma.05g178800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MQSQRTTPLRNPHTSTSDLLTWSEQPPPESSASGYRSRQPSDKIGEVLRGSQLTDEEAQSLTKKKPCSGYKLKEMTGSGIFSGKSEDTTSEENSANSKNRTSIRVYKQAMNGISQISFSTEGNISPKKPTSLPEIAKQRELGGTYQSKTVTKINKQTSSAKTKELSGSDIFAPPSEIVPRSLAAAHTLESKESKDTRRSVPQKRADGQSNFSFSEQPVKILRKKMHDQKFAEMTGNNIFKGDVPAGSPEKPSSRAKLREMAGSDIFADGKAESRDHILGARRPPGGGSGIALV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo