SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research



Report for Sequence Feature Glyma.05g178100

Feature Type:gene_model
Chromosome:Gm05
Start:36641320
stop:36650949
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G39910.1AT ATUBP3,UBP3 JGI N/AIEA
3.4.19.12EC ubiquitinyl hydrolase 1 JGI N/AIEA
GO:0016579GO-bp protein deubiquitination JGI N/AIEA
K11842KEGG Ubiquitin system JGI N/AIEA
KOG1871 KOG Ubiquitin-specific protease JGI N/AIEA
PTHR24006PantherFam UBIQUITIN CARBOXYL-TERMINAL HYDROLASE JGI N/AIEA
PF00443Pfam Ubiquitin carboxyl-terminal hydrolase JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma05g31170 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.05g178100.1 sequence-type=CDS polypeptide=Glyma.05g178100.1.p locus=Glyma.05g178100 id=Glyma.05g178100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTGCTGCGGGCTCCAAGCTCGAGAAGGCTCTCGGAGACCAATTCCCCGAAGGAGAACGTTACTTTGGCCTCGAGAATTTCGGCAACACTTGTTACTGCAACAGCGTCTTGCAGGCACTATACTTCTGTGTTCCGTTTCGCGAACAATTACTAGAGTATTATGGAAATAACAAAAGCATATTGGACGGGGAAGAAAATCTTTTAACTTGCTTAGCGGACTTATTTTCACAGATAAGTTCCCAGAAGAAAAAAACTGGTGTCATTGCTCCCAAACGATTTGTACAGAGGTTGAAAAAACAGAATGAACTCTTCCGTAGCTATATGCACCAGGATGCCCATGAGTTCTTGAACTTTTTGCTGAATGAACTTGTTGACATTCTGGAGAAAGAGGCTCAGGCTGCAAAAACTGATCAGGAGACATCTCCACCTTCTGAAAAGGCTGTTAATGGGCCCAAGAATGGTCAAGCTAATGGTGTTCACAAAGAGCCTTTAGTTACTTGGGTACACAAAAATTTTCAGGGAATACTCACCAATGAGACAAGGTGCTTGCAATGTGAAACAGTGACGGCTAGAGATGAAACATTTTTGGACTTGAGTCTTGATATTGAGCAAAACAGTTCAATTACAAGCTGTTTGAAAAATTTCAGTTCCACCGAGACACTGAATGCTGAAGACAAATTTTTTTGCGACAAATGCTGCAGTTTGCAAGAAGCTCAGAAGAGGATGAAGATAAAGAAACCACCTCACATCTTGGTCATCCATCTTAAGCGGTTTAAGTACATGGAACAGCTAGGCCGCTACAAGAAGCTGTCCTACCGGGTTGTTTTCCCCCTTGAGCTGAAGTTGAGTAACACAGTTGAAGATGCGGATATTGAGTATTCTCTATTTGCAGTAGTTGTCCATGTTGGGAGTGGGCCCAACCACGGGCATTATGTCAGTCTTGTGAAAAGCCATAACCACTGGTTATTTTTTGATGACGAAAATGTAGAGATGATTGACGAGTCTGCTGTGCAGACGTTCTTTGGATCATCACAGGAGTATTCAAGTAATACAGACCATGGGTACATTTTGTTCTATGAGAGCCTTGGCTCTGGTAACAGGAGTTAG

>Glyma.05g178100.1.p sequence-type=predicted peptide transcript=Glyma.05g178100.1 locus=Glyma.05g178100 id=Glyma.05g178100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSILDGEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQAAKTDQETSPPSEKAVNGPKNGQANGVHKEPLVTWVHKNFQGILTNETRCLQCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESLGSGNRS*







Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo