SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g176400

Feature Type:gene_model
Chromosome:Gm05
Start:36553001
stop:36557545
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g176400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G10350.1AT JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
K14396KEGG Messenger RNA biogenesis JGI N/AIEA
KOG4209 KOG Splicing factor RNPS1, SR protein superfamily JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA

Gene model name correspondences to Glyma.05g176400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g31026 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g176400
>Glyma.05g176400.1 sequence-type=CDS polypeptide=Glyma.05g176400.1.p locus=Glyma.05g176400 id=Glyma.05g176400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGAGGAAGAGCACGAGGTGTACGGAGGAGAGATCCCTGACGAGGGAGAGATGGAAGGAGACATTGACATGTCCGCCGCCGACGATGACGCCGCCGTCAAGGAGCTCGACGAGATGAAGCGCCGATTGAAGGAAATGGAAGAGGAAGCCGCAGCGCTTCGCGAGATGCAAGCCAAGGTCGATAAGGAGATTGGCAGCGTTCAAGATCCTGCTAATTCAGCTGCTTCTCAGGCAAACAAGGAGGAGGCAGATTCTCGGTCTGTTTTTGTTGGCAATGTTGATTATGCATGCACACCAGAAGAAGTGCAGCAACACTTTCAGTCCTGTGGTACTGTAAACAGGGTCACTATCCTGACTGACAAGTTTGGCCAGCCTAAAGGTTTTGCTTATGTGGAATTTGTTGAAGCTGAGGCTGTTCAAGAGGCTCTCCTGTTAAATGAATCTGAATTGCATGGCCGTCAATTGAAGGTTTTGCCTAAGAGGACCAATGTTCCTGGAATGAAACAATATCGTCCTAGGCGCTTTAATCCTTACATGGCATATGGCTTCAGGAGGCCATATACTCCTCCTTACTTTTACTCCCCTTATGGATACGGGAAGGTTCCTAGGTTTCGAAGGCCAAATCGTTACATGCCGTACCACTAG
Predicted protein sequences of Glyma.05g176400
>Glyma.05g176400.1.p sequence-type=predicted peptide transcript=Glyma.05g176400.1 locus=Glyma.05g176400 id=Glyma.05g176400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEEEEHEVYGGEIPDEGEMEGDIDMSAADDDAAVKELDEMKRRLKEMEEEAAALREMQAKVDKEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMAYGFRRPYTPPYFYSPYGYGKVPRFRRPNRYMPYH*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo