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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G54830.1 | AT | DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein | JGI | N/A | IEA |
GO:0055114 | GO-bp | oxidation-reduction process | EnsemblGenomes | N/A | IEA |
GO:0016020 | GO-cc | membrane | EnsemblGenomes | N/A | IEA |
GO:0016021 | GO-cc | integral component of membrane | EnsemblGenomes | N/A | IEA |
GO:0016021 | GO-cc | integral component of membrane | JGI | N/A | IEA |
KOG4731 | KOG | Protein predicted to be involved in spindle matrix formation, contains DM13, DoH, and DOMON domains | JGI | N/A | IEA |
PTHR23130 | Panther | FAMILY NOT NAMED | JGI | N/A | IEA |
PTHR23130:SF18 | Panther | JGI | N/A | IEA | |
PF03188 | PFAM | Eukaryotic cytochrome b561 | JGI | N/A | IEA |
PF03351 | PFAM | DOMON domain | JGI | N/A | IEA |
PF10517 | PFAM | Electron transfer DM13 | JGI | N/A | IEA |
Glyma.05g171900 not represented in the dataset |
Glyma.05g171900 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma05g30560 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.05g171900.1 sequence-type=CDS polypeptide=Glyma.05g171900.1.p locus=Glyma.05g171900 ID=Glyma.05g171900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGCTTCGCAGATCCCTCATCATCATCCTACACTTGTCGTTGTTGTCGTTCGGATATGCGGATCCCGCTCCCAATTGCACTCGCCTCAGCTCCGTCGTCAATTCGGAGTCGGAGTTCGAAATGGTTCAACACCAACTCCGAGGATCCCTGAAAATCAGGGACGATTGCTCCTTTAGGGTTTCCCAATTCGACATGCTTCCCGGTTCCGACGTCCACTGGTGGGGTGCGCAGGCTTCCGATTTCGATAACCTCACCGCCGGATTCATTGTTTCCAACTACGGATTGAACGGAACCTACAACAACTCCACCTTCGATGTGCATTTGTTGAGCAATGTTTCCTGGAGCATGATCAACGTCCTCGCCGTCTGGGATCGTGCCACCGCCTCCGATTTCGGCCACGTCGTGCTCCGCAAGGACGCCCCGGCGTCGCCTCCTCCTCCGACGGTGTTCGAGAATTGCAAGGTTTTGTCGAAGAATTTCAGGTTGAGGTGGAGTTTGAATGTGTCCGAGGATTCTCTTGAAATTGGGTTGGAGGCCGCGACTGGGATCACCAATTACATGGCTTTTGGGTGGGCTAATTCCAGTGCTCAAGATTCTGATCTCATGATTGGTGCTGATGTTGTCGTTGCAGGGTTTAAGGAAGATGGTATGCCCTTTGTGGATGATTTTTTCATTACTAAGTATAGTGAGTGTGTGAGAAATAGTGATGGAGTTGCTCAAGGGGTATGTCCTGATTCCTTTTATGAAGGCCCTGATGGGGTGGGTTTAGTCAACAATTCAATGTTGGTTTATGGCCATAGGAAGGATGGGGTGACCTTTGTCAGATACCGCAGGCATTTGACTAAGGTCGATGGAAAGTATGATCATCCCGTGAACCATTCAGCGAATATGAAGGTTATTTGGGCTTTGGGGCGTATCAAGCCTCCCGATTCTATTAATCCTTACTATCTTCCTCAGAATCATGGGGCCGTGAATTATGGCCATTTGGTTTTGAATGTCTCGGAGCATGTGAATGAGTGTACAGGTCCCTTGGATGCTGAAGACAAAGAAGATCAAGGTCTCATCACTGCAGATGCAAATGTTCCCTTGGTGGTTTCTTCTGCTCCGGCAATGCATTACCCCAACCCTCCAAATCCTGAAAAGGTTCTTTATATCAACAAAAAGGAAGCTCCTGTCTTGAGAGTGGAAAGAGGGGTGCCGGTCAAGTTTTCGATCCAAGCCGGGCACGATGTTGCACTTTATATTACTTCGGATCCGCTTGGTGGAAATGCTACCACGAGAAATCTGACTGAGACTATTTATGCTGGAGGTCCAGAGGCCCACGGAGTTCAAGCCAGTCCTACAGAATTAGTTTGGGCTCCTGACAGGAACACTCCTGATCACGTCTACTATCATTCCTTGTTCGACCAGAAGATGGGTTGGAAGGTCGAGGTGGTTGATGGGGGTCTATCGGACATGTATAATAACAGTGTCATTTTGGATGATCAACAGGTTACCTTCTTTTGGACATTGTCAAAGGATTCCATATCTATTGCAGCTCGTGGCGAGAAAAAAAGTGGTTATATTGCCATAGGGTTTGGAAGTGGAATGGTGAACAGCTATGTGTATGTGGGTTGGATTGATGATACTGGTGTGGGACATGTAAACACTTATTGGATTGATGGAAAGGATGCTTCAAGCATACACGGCACGCAGGAAAATTTGACACATGTGAGATGCAAAACAGAAAATGGCATCATTACTTTTGAGTTTACTCGTCCCTTGGACCCGTCTTGTAGGCGGGAAAAGAGGGTAGAATGTAAAAATATCGTTGATCCCACAACTCCTCTCAAAGTTGTTTGGGCAATGGGTGCTAAATGGACTGATGATCATCTTACTGACAGGAATATGCATTCTAGTACAAGTAATAGGGCTATTCTTGTACACCTGATGCGTGGTTCAGCAGAGGCGGAGCAGGATTTACTTCCTGTTTTGGCTGTGCATGGATTTATGATGTTTGTTGCATGGGGTATCCTGTTTCCTGGAGGGATATTGGCAGCCAGGTACTTAAAACATCTCAAGGGCGATGGATGGTACCGGATTCATGTTTACTTGCAATACTCAGGGTTAGTAATTGTTCTGCTTGCCCTTCTTTTTGCTGTGGCTGAGCTTAGGGGATTTTATTTCAGCTCAACTCATGTTAAATTTGGATTTGCTACTATATTGTTGGCTTGCATACAGCCAGCAAATGCTTTCCTAAGGCCTCCAAAACCAGCCAATGGGGAGCAGGCATCCTCCAAGAGGGTTATTTGGGAGTGTTTTCACACAATTGTTGGTAGATGTGCCATTGTTGTTGGCATTGCTGCACTTTTTACTGGGATGAAGCATCTAGGAGACAGATACGATGTGGAAAATGTCCATGGACTCAGATGGGCTATGGCAATTTGGTTTTTAATTGGTGCATTGATTGTTATTTATTTGGAATACCATGAAAGGCAGCGAATAGGGCGGCAGATATCTGGAAGAGGCAATTGGGTGCTTGGTAATCTTGAGGAAGATGATTCAGTTGATCTCTTGAGGCCAACCAGAACAACTGCAGATAAAGAGTTGCAACACTCTGCGAGAATGGAAGTCCAATTAGAACCTTTGAACAGATAA
>Glyma.05g171900.1.p sequence-type=predicted peptide transcript=Glyma.05g171900.1 locus=Glyma.05g171900 ID=Glyma.05g171900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MLRRSLIIILHLSLLSFGYADPAPNCTRLSSVVNSESEFEMVQHQLRGSLKIRDDCSFRVSQFDMLPGSDVHWWGAQASDFDNLTAGFIVSNYGLNGTYNNSTFDVHLLSNVSWSMINVLAVWDRATASDFGHVVLRKDAPASPPPPTVFENCKVLSKNFRLRWSLNVSEDSLEIGLEAATGITNYMAFGWANSSAQDSDLMIGADVVVAGFKEDGMPFVDDFFITKYSECVRNSDGVAQGVCPDSFYEGPDGVGLVNNSMLVYGHRKDGVTFVRYRRHLTKVDGKYDHPVNHSANMKVIWALGRIKPPDSINPYYLPQNHGAVNYGHLVLNVSEHVNECTGPLDAEDKEDQGLITADANVPLVVSSAPAMHYPNPPNPEKVLYINKKEAPVLRVERGVPVKFSIQAGHDVALYITSDPLGGNATTRNLTETIYAGGPEAHGVQASPTELVWAPDRNTPDHVYYHSLFDQKMGWKVEVVDGGLSDMYNNSVILDDQQVTFFWTLSKDSISIAARGEKKSGYIAIGFGSGMVNSYVYVGWIDDTGVGHVNTYWIDGKDASSIHGTQENLTHVRCKTENGIITFEFTRPLDPSCRREKRVECKNIVDPTTPLKVVWAMGAKWTDDHLTDRNMHSSTSNRAILVHLMRGSAEAEQDLLPVLAVHGFMMFVAWGILFPGGILAARYLKHLKGDGWYRIHVYLQYSGLVIVLLALLFAVAELRGFYFSSTHVKFGFATILLACIQPANAFLRPPKPANGEQASSKRVIWECFHTIVGRCAIVVGIAALFTGMKHLGDRYDVENVHGLRWAMAIWFLIGALIVIYLEYHERQRIGRQISGRGNWVLGNLEEDDSVDLLRPTRTTADKELQHSARMEVQLEPLNR*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||