SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g166100

Feature Type:gene_model
Chromosome:Gm05
Start:35697465
stop:35702598
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g166100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G30500.2AT NF-YA7 JGI N/AIEA
GO:0006355GO-bp regulation of transcription, DNA-templated JGI N/AIEA
GO:0003700GO-mf DNA-binding transcription factor activity JGI N/AIEA
K08064KEGG Transcription factors JGI N/AIEA
PTHR12632PantherFam TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED JGI N/AIEA
PF02045Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B JGI N/AIEA

Gene model name correspondences to Glyma.05g166100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g29970 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g166100
>Glyma.05g166100.1 sequence-type=CDS polypeptide=Glyma.05g166100.1.p locus=Glyma.05g166100 id=Glyma.05g166100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTTTGGACAGTGTTACGTGCTTCACGAAACATGACCTCTGCTCACGACCTTACTGATAATGAAGATGATGGACAGCAGCAGTCAGAATCACCAATGCAGCCCCCATCTGTAAATGGAATATCTGATCCAGGTATTAGTACCCAGAATGTCAATGTACAGTATGCAGCACCTGGCCAGCTTGGAACTGGGCATGCAATGGTACCACATGTGTATCCATATCCAGATCCTTACTATAGAAGCATCTTTGCTCCCTATGATACACAACCTTATCCCCCACAAGCCTATAGTGGGCAGCCAATGGTCCATCTTCAGTTAATGGGAATTCAGCAAGCTGGTGTTCCTCTGCCAACTGATGCAGTTGAGGAGCCTGTGTTTGTCAATGCAAAACAATATCACGGTATATTAAGACGTAGACAATACCGTGCGAAAGCTGAATCAGAAAATAAAATTATAAGGAATAGGAAGCCATACTTGCATGAATCTCGACACAAGCATGCACTGACAAGACCAAGAGGATGTGGTGGTCGGTTTCTGAATTCAAAGAAAGACAAGAATCAGAATGATGATGTGGCATCAGCTGACAAATCACAATCCAATATCAATATCAATTCTAATAAAAATGATCAAACTTCATCAGATAGGGCATCCTAA

>Glyma.05g166100.2 sequence-type=CDS polypeptide=Glyma.05g166100.2.p locus=Glyma.05g166100 id=Glyma.05g166100.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACCTCTGCTCACGACCTTACTGATAATGAAGATGATGGACAGCAGCAGTCAGAATCACCAATGCAGCCCCCATCTGTAAATGGAATATCTGATCCAGGTATTAGTACCCAGAATGTCAATGTACAGTATGCAGCACCTGGCCAGCTTGGAACTGGGCATGCAATGGTACCACATGTGTATCCATATCCAGATCCTTACTATAGAAGCATCTTTGCTCCCTATGATACACAACCTTATCCCCCACAAGCCTATAGTGGGCAGCCAATGGTCCATCTTCAGTTAATGGGAATTCAGCAAGCTGGTGTTCCTCTGCCAACTGATGCAGTTGAGGAGCCTGTGTTTGTCAATGCAAAACAATATCACGGTATATTAAGACGTAGACAATACCGTGCGAAAGCTGAATCAGAAAATAAAATTATAAGGAATAGGAAGCCATACTTGCATGAATCTCGACACAAGCATGCACTGACAAGACCAAGAGGATGTGGTGGTCGGTTTCTGAATTCAAAGAAAGACAAGAATCAGAATGATGATGTGGCATCAGCTGACAAATCACAATCCAATATCAATATCAATTCTAATAAAAATGATCAAACTTCATCAGATAGGGCATCCTAA
Predicted protein sequences of Glyma.05g166100
>Glyma.05g166100.1.p sequence-type=predicted peptide transcript=Glyma.05g166100.1 locus=Glyma.05g166100 id=Glyma.05g166100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVWTVLRASRNMTSAHDLTDNEDDGQQQSESPMQPPSVNGISDPGISTQNVNVQYAAPGQLGTGHAMVPHVYPYPDPYYRSIFAPYDTQPYPPQAYSGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQYRAKAESENKIIRNRKPYLHESRHKHALTRPRGCGGRFLNSKKDKNQNDDVASADKSQSNININSNKNDQTSSDRAS*

>Glyma.05g166100.2.p sequence-type=predicted peptide transcript=Glyma.05g166100.2 locus=Glyma.05g166100 id=Glyma.05g166100.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTSAHDLTDNEDDGQQQSESPMQPPSVNGISDPGISTQNVNVQYAAPGQLGTGHAMVPHVYPYPDPYYRSIFAPYDTQPYPPQAYSGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQYRAKAESENKIIRNRKPYLHESRHKHALTRPRGCGGRFLNSKKDKNQNDDVASADKSQSNININSNKNDQTSSDRAS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo