SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g162900

Feature Type:gene_model
Chromosome:Gm05
Start:35432070
stop:35434097
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g162900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G60500.1AT DRP4C JGI N/AIEA
3.6.5.5EC dynamin GTPase JGI N/AIEA
GO:0003924GO-mf GTPase activity JGI N/AIEA
GO:0005525GO-mf GTP binding JGI N/AIEA
KOG0446 KOG Vacuolar sorting protein VPS1, dynamin, and related proteins JGI N/AIEA
PTHR11566PantherFam DYNAMIN JGI N/AIEA
PF00350Pfam Dynamin family JGI N/AIEA
PF01031Pfam Dynamin central region JGI N/AIEA
PF02212Pfam Dynamin GTPase effector domain JGI N/AIEA

Gene model name correspondences to Glyma.05g162900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g29541 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g162900
>Glyma.05g162900.1 sequence-type=CDS polypeptide=Glyma.05g162900.1.p locus=Glyma.05g162900 id=Glyma.05g162900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGGAGGAAAGAGAATTATCAGTAAGGCTATTGTTGAATCATCTGTTACTCGACGTGAAACTGACCCATCTGAAGAACAGCCTCAGCCTCTTGCTATTGTTGCACCAATTGTGTCCTCTTATAATGAGAGGATACGTCCAGTTCTTGATGCTATGGAAAATCTCAGGCGCCTTAACATTTCAAAGGAGGGAATTCAGCTTCCTTCCATTGTTGTTGTTGGTGATCAATCTTCTGGGAAATCAAGTGTTCTTGAATCTCTTGCTGGTATCAACTTGCCACGTGGCCAAGGCATTTGCACTAGGGTGCCCTTGGTCATGAGGCTCCAAAACCACCCTTTTCCAACCCCAGAGCTTATGTTGGAGTTCAATGGAAAAATCGTCTCCACTGATGAAGCAAACGTTTCTCATGCCATAAATGCTGCCACAGAAGAGCTTGCAGGCCATGGTAAAGGGATTTCCAACAACCCTTTGACTTTGCTGGTGAAGAAGAATGGTGTTCCTGATCTCACAATGGTTGATCTTCCTGGTATAACTCGGGTTCCAGTTCATGGTCAACCTGAGAACATTTATGACCAGATTAAAGACATGATCATGGAGTACATTAAGCCAGAAGAAAGTATTATCTTGAATGTTCTTTCTGCTAGTGTTGATTTCACTACATGTGAGTCTATTAGAATGTCTCAGAGTGTTGACAAAACTGGCCTCAGGACACTGGCTGTGGTCACAAAGGCAGACAAGTCTCCTGAGGGCTTGTTAGAAAAAGTTACTGCTGATGATGTGAACATAGGTCTTGGTTATGTTTGTGTGAGAAACCGCATTGGTGATGAGTCTTATGAGGATGCTAGAGTGGAAGAACAGATGCTGTTTGAGTCCCATCCACTTCTTTCCAAAATAGACAAGTCTATGGTGGGTGTTCCAGTTTTAGCACAGAAACTGGTTCAGATTCAGGCAATCAGCATATCTAAAACTTTGCCAGAAATAGTTAAAAAGATCAATGAGAAGCTAGCTAACAATTTGTCTGAGTTGGAAAAGTTGCCAACAAACTTGGCTTCAGTAGCTGATGCCATGACAGCTTTTATGCATATTATCGGATTGACTAAGGAATCTCTTAGAAGAATTCTTCTTAGAGGAGAATTTGATGAGTATATGGAAGACAAAAACATGCATTGTACTGCCCGGTTGGTGGAGATGCTTGATTCCTTCACAAATGATCTTTACACTTGTGCTGAAAGTGATGCAAGCAAGAATTTTCTTATGCAAGAGATAAAGGTGCTGGAGGAGGCAAAGTGGATTGGTCTTCCAAATTTCATGCCTCGCACTGCTTTTCTTTCTATATTGCAAGGGAAGGTGAATGGGATTGCCAACAAGCCTATAGGTTTTGTTGAAAATGTGTGGAACTATCTGGAAAATGTGCTGATTTCAGTTATCACGCGTCACTCTGAAAACTACTACCAGCTTTTGATGTCTACCAGGCGTGCAAGTGAGGTTCTTATTTCTAAGAAGAAGATAAGTTCCACAAAACATGTAAGAGAGGCCATCCAAATGGAGATGCATACTGATTACACTTGTAATCCTGAGTTTGTGAAGGAATACAACAAGTTAATATCTCAGCAAGATGCTTTTCTGAATGATGTTTTGAACAATGAGGATAATCCATCACATGTGAATCTTGAAGGTGTGGGCAACATTGAAGTTGGTCATTTGAGGCAATACCCATCGTCTGTGCTTGCTCAAGCATTTGATTTGAAGGTTAGGATGATTTCGTACTGGAAGATAGTGCAGAGACGATTGATTGACACAATTGCCTTACATCTTATGCTTAGTATTAACAATCTTGTTAACGAGGATTTGGAGAAGGAGATTGTTCAGGATCTGTTATCCCCTAGTAGTGGTGGGTTAGAGAGGTTGTTGGAGGAGTCACCTTCAATTTCTGGGAAGCGTGAAAAGCTGCAGAGGAGTCTCAAAGTCCTAAGGGAGAGCAAGGAAACTGTTGCTCACATAATTGACCGAATTGCAACCCATTGA
Predicted protein sequences of Glyma.05g162900
>Glyma.05g162900.1.p sequence-type=predicted peptide transcript=Glyma.05g162900.1 locus=Glyma.05g162900 id=Glyma.05g162900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAGGKRIISKAIVESSVTRRETDPSEEQPQPLAIVAPIVSSYNERIRPVLDAMENLRRLNISKEGIQLPSIVVVGDQSSGKSSVLESLAGINLPRGQGICTRVPLVMRLQNHPFPTPELMLEFNGKIVSTDEANVSHAINAATEELAGHGKGISNNPLTLLVKKNGVPDLTMVDLPGITRVPVHGQPENIYDQIKDMIMEYIKPEESIILNVLSASVDFTTCESIRMSQSVDKTGLRTLAVVTKADKSPEGLLEKVTADDVNIGLGYVCVRNRIGDESYEDARVEEQMLFESHPLLSKIDKSMVGVPVLAQKLVQIQAISISKTLPEIVKKINEKLANNLSELEKLPTNLASVADAMTAFMHIIGLTKESLRRILLRGEFDEYMEDKNMHCTARLVEMLDSFTNDLYTCAESDASKNFLMQEIKVLEEAKWIGLPNFMPRTAFLSILQGKVNGIANKPIGFVENVWNYLENVLISVITRHSENYYQLLMSTRRASEVLISKKKISSTKHVREAIQMEMHTDYTCNPEFVKEYNKLISQQDAFLNDVLNNEDNPSHVNLEGVGNIEVGHLRQYPSSVLAQAFDLKVRMISYWKIVQRRLIDTIALHLMLSINNLVNEDLEKEIVQDLLSPSSGGLERLLEESPSISGKREKLQRSLKVLRESKETVAHIIDRIATH*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo