SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g156300

Feature Type:gene_model
Chromosome:Gm05
Start:34919995
stop:34925823
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g156300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G25650.1AT ACD1-LIKE,PTC52,TIC55-IV JGI N/AIEA
1.14.12.20EC JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0010277GO-mf chlorophyllide a oxygenase [overall] activity JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
GO:0051537GO-mf 2 iron, 2 sulfur cluster binding JGI N/AIEA
PTHR21266PantherFam IRON-SULFUR DOMAIN CONTAINING PROTEIN JGI N/AIEA
PF00355Pfam Rieske [2Fe-2S] domain JGI N/AIEA
PF08417Pfam Pheophorbide a oxygenase JGI N/AIEA

Gene model name correspondences to Glyma.05g156300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g28900 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g156300
>Glyma.05g156300.1 sequence-type=CDS polypeptide=Glyma.05g156300.1.p locus=Glyma.05g156300 id=Glyma.05g156300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGCTGTGTGTGCTTTTTCTGTTGGCACACTTCACATCCCAACAGCACATGAAACATCAAACTCCTTTAGGAAATCCATATTCTTGAGCAACCAAGTGGCTTCACCAGTTTCATTGGTTTTTCTCAGGGGCAGTTCAAAATCCAAGCTTTTAACTGCCTTGTCACCCCCTCCATTGACAGAATCCAGTAACCAACCTGAGGCTGAGCCAGAATTTGAAAGTCATGCAGAGAAATTTGACTGGTACTCTCAGTGGTACCCTTTGATGCCAATTTGTGACCTTGACAAGAGGAAGCCACATGGGAAGAGGGTGTTGGGAATTGATGTGGTTGTGTGGTGGGATAGGAATGAGGGTGCTTGGCAGGTTCATGATGATGCTTGTCCTCATAGATTAGCACCCTTGTCTGATGGAAGGATTGATCAATGGGGCAGGTTGCAGTGTGTGTACCATGGTTGGTGTTTCAATGGCAAAGGAGAATGCCAGCTCATTCCTCAGGCACTCCCTGATGGCCCTCCGGTACATACGTCCAAAAAAGCATGTGTAGCTGCTTACCCAAGTACTGTGCAGAATGATATCTTGTGGTTCTGGCCAAATACTGATCCTCAATACAAAGATATTATTACAAGAAAAAGACCCCCATTCATACCAGAAATAGATGATCCATCGTATACTAAATCAATGGGAAACAGAGACATTCCTTATGGGTATGAAGTACTGATAGAAAATCTTATGGATCCTGCACATGTTCCATATGCACACTATGGACTAATGCGTACTCCGCAACCAAAAGTGAAAGCTGATAGAGAAGGGGGCAGGCCACTTGACATGTCTATTGAAAAGTTAGATATCAATGGCTTTTCAGCAAATCAGGCTTGGGGCAAAAGCAAATTTATGCCACCATGCATTTTTTATGCATATACTCCAGATCAACCTGCCTCATCTGGTGAAACTAAGAAATCATCAGCTAAGAAGAAAATGTGTTTAATCTTTGTTTGCGTTCCGGTTAGTCCTGGTAAAAGCAGATTGATATGGTGCTTCCCAAGAAACTTTGGATTGTGGATGGACAAAATTGTACCACGATGGATATTTCATGTGGGACAAAACCTGATTCTGGATTCAGATTTATATCTCCTCCATGTTGAGGAACATAAACTAAAGGATATTGGTCCAAACAATTGGCACAAAGCCTGTTTTGTGCCAACAAAGTCAGACGCCCTTGTTATTGGTTATAGAACGTGGCTAAGGAAGTATGCAGGTGGTCAGGTTGATTGGAGAGGAAAATATAGTGGAGCTCTTCCTCCAACACCTCCGAGAGAACAGCTTTTGGACAGGTACTGGTCCCATGTGGTGAATTGCAAGAGTTGCAATTCTGCTTATAAGAGCCTCAATGCGGTTGAAGTAATGCTGCAGATCATATCTGTTGCTTCAATTGGGATTGTTGCCGTCATGAAGCATGGTACAATGTCAGTGGCAAAAAGAAATTCAATGGTTGCCTTAGCAGTGCTATCATTTGCACTGTCACGGTGGTTAGCTCACTTCATATACAAAAACTTCCGTTATCATGACTATGAGCATGCCTTCCGCTGA
Predicted protein sequences of Glyma.05g156300
>Glyma.05g156300.1.p sequence-type=predicted peptide transcript=Glyma.05g156300.1 locus=Glyma.05g156300 id=Glyma.05g156300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEAVCAFSVGTLHIPTAHETSNSFRKSIFLSNQVASPVSLVFLRGSSKSKLLTALSPPPLTESSNQPEAEPEFESHAEKFDWYSQWYPLMPICDLDKRKPHGKRVLGIDVVVWWDRNEGAWQVHDDACPHRLAPLSDGRIDQWGRLQCVYHGWCFNGKGECQLIPQALPDGPPVHTSKKACVAAYPSTVQNDILWFWPNTDPQYKDIITRKRPPFIPEIDDPSYTKSMGNRDIPYGYEVLIENLMDPAHVPYAHYGLMRTPQPKVKADREGGRPLDMSIEKLDINGFSANQAWGKSKFMPPCIFYAYTPDQPASSGETKKSSAKKKMCLIFVCVPVSPGKSRLIWCFPRNFGLWMDKIVPRWIFHVGQNLILDSDLYLLHVEEHKLKDIGPNNWHKACFVPTKSDALVIGYRTWLRKYAGGQVDWRGKYSGALPPTPPREQLLDRYWSHVVNCKSCNSAYKSLNAVEVMLQIISVASIGIVAVMKHGTMSVAKRNSMVALAVLSFALSRWLAHFIYKNFRYHDYEHAFR*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo