SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g154600

Feature Type:gene_model
Chromosome:Gm05
Start:34824197
stop:34825712
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g154600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G55260.1AT JGI N/AIEA
PTHR33044PantherFam BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED JGI N/AIEA
PF14368Pfam Probable lipid transfer JGI N/AIEA

Gene model name correspondences to Glyma.05g154600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g28720 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g154600
>Glyma.05g154600.1 sequence-type=CDS polypeptide=Glyma.05g154600.1.p locus=Glyma.05g154600 id=Glyma.05g154600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTTCCATAGGGGCAAAAAATCTAGCACTCTCCTCAGCCTTTTTGCTCCTTTTGGTCGGTTTTGCAACCTCAGACATCAACCAAGACAAAGCAGAATGTACCGACAAACTTCTTGGTCTAGCTGGTTGTCTTCCCTATGTTGGTGGTGAAGCCAAAGTCCCCGCCATGGATTGTTGCTCTGGTATCAGAGAGGTTATTGACAAGAGCAAGAGGTGCCTCTGCATCCTCATCAAGGATCGTGATGACCCTAATCTTGGCCTCAAGATCAACGTCACCCTTGCTCTAAGTTTACCAGATGCTTGTCAAACACCCACCAATATAACTCAGTGTGTTGATCTTTTGCATTTGGCACCTAACTCCACGGAAGCTAAGGTGTTTGAGGGGTTTAAAAATGCCTTGACCAACAAAACTAGTCCCTCCTCAGTCCCTGGTGCTAATAACGCGACTGCTAATGGAACAAGCACGAGCGCGAACAACAACAGCAGTAGTGGGTGGGGAAAGAGGTGGTTGGTGACAGAGGTGCTTTGTGGGATTTTACCGTTTGTTTTCATTTCCCATTTATTCCTCTTCGTAGTTTGA

>Glyma.05g154600.2 sequence-type=CDS polypeptide=Glyma.05g154600.2.p locus=Glyma.05g154600 id=Glyma.05g154600.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTTCCATAGGGGCAAAAAATCTAGCACTCTCCTCAGCCTTTTTGCTCCTTTTGGTCGGTTTTGCAACCTCAGACATCAACCAAGACAAAGCAGAATGTACCGACAAACTTCTTGGTCTAGCTGGTTGTCTTCCCTATGTTGGTGGTGAAGCCAAAGTCCCCGCCATGGATTGTTGCTCTGGTATCAGAGAGGTTATTGACAAGAGCAAGAGGTGCCTCTGCATCCTCATCAAGGATCGTGATGACCCTAATCTTGGCCTCAAGATCAACGTCACCCTTGCTCTAAGTTTACCAGATGCTTGTCAAACACCCACCAATATAACTCAGTGTGTTGATCTTTTGCATTTGGCACCTAACTCCACGGAAGCTAAGGTGTTTGAGGGGTTTAAAAATGCCTTGACCAACAAAACTAGTCCCTCCTCAGTCCCTGCTAATAACGCGACTGCTAATGGAACAAGCACGAGCGCGAACAACAACAGCAGTAGTGGGTGGGGAAAGAGGTGGTTGGTGACAGAGGTGCTTTGTGGGATTTTACCGTTTGTTTTCATTTCCCATTTATTCCTCTTCGTAGTTTGA
Predicted protein sequences of Glyma.05g154600
>Glyma.05g154600.1.p sequence-type=predicted peptide transcript=Glyma.05g154600.1 locus=Glyma.05g154600 id=Glyma.05g154600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSSIGAKNLALSSAFLLLLVGFATSDINQDKAECTDKLLGLAGCLPYVGGEAKVPAMDCCSGIREVIDKSKRCLCILIKDRDDPNLGLKINVTLALSLPDACQTPTNITQCVDLLHLAPNSTEAKVFEGFKNALTNKTSPSSVPGANNATANGTSTSANNNSSSGWGKRWLVTEVLCGILPFVFISHLFLFVV*

>Glyma.05g154600.2.p sequence-type=predicted peptide transcript=Glyma.05g154600.2 locus=Glyma.05g154600 id=Glyma.05g154600.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSSIGAKNLALSSAFLLLLVGFATSDINQDKAECTDKLLGLAGCLPYVGGEAKVPAMDCCSGIREVIDKSKRCLCILIKDRDDPNLGLKINVTLALSLPDACQTPTNITQCVDLLHLAPNSTEAKVFEGFKNALTNKTSPSSVPANNATANGTSTSANNNSSSGWGKRWLVTEVLCGILPFVFISHLFLFVV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo