SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g150400

Feature Type:gene_model
Chromosome:Gm05
Start:34469961
stop:34473177
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g150400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G23730.1AT XTH16 JGI N/AIEA
2.4.1.207EC xyloglucan:xyloglucosyl transferase JGI N/AIEA
3.2.1.151EC xyloglucan-specific endo-beta-1,4-glucanase JGI N/AIEA
GO:0005975GO-bp carbohydrate metabolic process JGI N/AIEA
GO:0006073GO-bp cellular glucan metabolic process JGI N/AIEA
GO:0005618GO-cc cell wall JGI N/AIEA
GO:0048046GO-cc apoplast JGI N/AIEA
GO:0004553GO-mf hydrolase activity, hydrolyzing O-glycosyl compounds JGI N/AIEA
GO:0016762GO-mf xyloglucan:xyloglucosyl transferase activity JGI N/AIEA
K08235KEGG Enzymes with EC numbers JGI N/AIEA
PTHR31062PantherFam XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED JGI N/AIEA
PF00722Pfam Glycosyl hydrolases family 16 JGI N/AIEA
PF06955Pfam Xyloglucan endo-transglycosylase (XET) C-terminus JGI N/AIEA

Gene model name correspondences to Glyma.05g150400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g28310 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g150400
>Glyma.05g150400.1 sequence-type=CDS polypeptide=Glyma.05g150400.1.p locus=Glyma.05g150400 id=Glyma.05g150400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTCCTAGTTCTACTCACAATACTGGGTTCTATGTGCTTATGCTAGTTGGGATAGTGATTAGCACTATGGTTGCTACCTGTGCTGGTAGCTTCTACCAAGACTTTGATCTAACATGGGGTGGTGACCGTGCTAAGATATTCAATGGTGGCCAGCTTCTATCTCTTTCCCTTGACAAAGTCTCTGGCTCTGGCTTCAAATCAAAGAAAGAATACCTATTTGGGAGGATTGATATGCAGCTCAAGCTCGTTGCTGGCAACTCTGCTGGCACTGTCACTGCTTACTACTTGTCATCCCAAGGGCCAACACATGATGAGATTGATTTCGAGTTTTTGGGAAACCTAAGTGGGGACCCTTATATTCTCCACACAAACATCTTCACGCAAGGCAAAGGTAACAGGGAGCAACAGTTCTATCTCTGGTTCGACCCCACCAGAAACTTCCACACTTATTCTATCATTTGGAAGCCCCAGCACATCATATTCTTGGTTGATAACACACCAATAAGGGTATTCAAGAATGCTGAATCTCTTGGTGTTCCTTTTCCAAAGAACCAGCCCATGAGAATCTATTCTAGCCTCTGGAATGCTGATGACTGGGCCACCAGAGGAGGATTGGTGAAAACTGATTGGTCCAAAGCACCCTTTACAGCATACTACCGCAATTTCAAAGCCACTGAGTTCTCACTCAAGTCTTCCATTTCAAATTCTGGTGCTGAATATGAGGCAAATGAGCTTGATTCTTATAGCAGAAGAAGACTGAGATGGGTTCAGAAGTACTTCATGATCTATAACTACTGCAGTGATCTCAAGCGATTCCCACAAGGTCTTCCTGCTGAATGTAGACGCTGA
Predicted protein sequences of Glyma.05g150400
>Glyma.05g150400.1.p sequence-type=predicted peptide transcript=Glyma.05g150400.1 locus=Glyma.05g150400 id=Glyma.05g150400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAPSSTHNTGFYVLMLVGIVISTMVATCAGSFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAESLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKATEFSLKSSISNSGAEYEANELDSYSRRRLRWVQKYFMIYNYCSDLKRFPQGLPAECRR*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo