SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g149300

Feature Type:gene_model
Chromosome:Gm05
Start:34397959
stop:34401362
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g149300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G03870.2AT JGI N/AIEA
K12626KEGG Spliceosome JGI N/AIEA
KOG1781 KOG Small Nuclear ribonucleoprotein splicing factor JGI N/AIEA
PTHR10553PantherFam SMALL NUCLEAR RIBONUCLEOPROTEIN JGI N/AIEA
PF01423Pfam LSM domain JGI N/AIEA

Gene model name correspondences to Glyma.05g149300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g28190 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g149300
>Glyma.05g149300.1 sequence-type=CDS polypeptide=Glyma.05g149300.1.p locus=Glyma.05g149300 id=Glyma.05g149300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGGGCAGAAAGGAAACGGTTTTGGACCTTGCAAAGTTTGTAGACAAAGGCGTTCAAGTTAAGCTTACTGGTGGCAGACAAGTGACAGGGACTCTGAAAGGGTATGATCAGTTGCTTAACCTTGTCCTAGATGAAGCTGTAGAGTTTTTAAGAGATCCTGATGATCCCCTCAAAACTACCGATCAGACCAGAAATCTTGGCTTAATTGTTTGTAGAGGAACTGCTGTCATGCTTGTGTCCCCAACTGATGGTACAGATGAGATCGCCAACCCCTTTATACAGCCAGATGGGTCTTAA
Predicted protein sequences of Glyma.05g149300
>Glyma.05g149300.1.p sequence-type=predicted peptide transcript=Glyma.05g149300.1 locus=Glyma.05g149300 id=Glyma.05g149300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKTTDQTRNLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo