Glyma.05g145800

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Report for Sequence Feature Glyma.05g145800

Feature Type:	gene_model
Chromosome:	Gm05
Start:	33952829
stop:	33960505
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.05g145800

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G67580.1	AT	Protein kinase superfamily protein	JGI	N/A	IEA
GO:0006468	GO-bp	protein phosphorylation	EnsemblGenomes	N/A	IEA
GO:0006468	GO-bp	protein phosphorylation	JGI	N/A	IEA
GO:0007346	GO-bp	regulation of mitotic cell cycle	EnsemblGenomes	N/A	IEA
GO:0010468	GO-bp	regulation of gene expression	EnsemblGenomes	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
GO:0004672	GO-mf	protein kinase activity	EnsemblGenomes	N/A	IEA
GO:0004672	GO-mf	protein kinase activity	JGI	N/A	IEA
GO:0004693	GO-mf	cyclin-dependent protein serine/threonine kinase activity	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	JGI	N/A	IEA
KOG0663	KOG	Protein kinase PITSLRE and related kinases	JGI	N/A	IEA
PTHR24056	Panther	CELL DIVISION PROTEIN KINASE	JGI	N/A	IEA
PTHR24056:SF86	Panther		JGI	N/A	IEA
PF00069	PFAM	Protein kinase domain	JGI	N/A	IEA

Proteins Associated with Glyma.05g145800

Locus	Gene Symbol	Protein Name
	Cdk8-2	Cyclin-dependent kinase 8 gene 2

Expression Patterns of Glyma.05g145800

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.05g145800 not represented in the dataset	Glyma.05g145800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.05g145800

Paralog	Evidence	Comments
Glyma.08g102600	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.05g145800 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma05g27821	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.05g145800

Limit To All Plant Sequences

>Glyma.05g145800.2 sequence-type=transcript locus=Glyma.05g145800 ID=Glyma.05g145800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTGGGCTCAATTTTCTTTCTCCGCGAAGGGtcgctctctctctttctctcttctcttctTCGCAGCCGCATCGCATCGCTTATTGGATTGCGTTGCCTCCCTCGTTCTCTCCCTTTTGATATCCAATTTCATCATCATTCGTCGATCTCTCGCGCGTTCTTCAATTTTGAATTCTCGGGGATTCGTTTTGTTTTGGGTTTAGGGCTCTATTAAACAAAAAATACAAAATTTTTTTTGCAAAGGGGGGATTAGGGTTTTCCCTTGTAATTCACGAACTTAGGTATATAGAGACATATATGGCGGCTGGCAGACATGGCGGTTACCGCGAAAACGAGTTCAGAGAGCGCGAGTCAAAGTTGGAAGTTTCCAGACGCGGCGGATTCGCGAATTCGAAAGAGGATTACGATCGTGTTAGCAATGGTGGCGGTGATGTTGTGAGGGGTGGATCAAGGGATAGGGTTAGGGTGAGGCAGAAGGATATTAAGGAGAGGGAAGATGTTAATGGTGGTGGTTATCGATCCTCTTCGAGTAGGAGTGACTCTGGCAGCAGTGGCCTTGGTCCTCGCCAATGTGGTTTCTCTGTCAAGTCAGTTGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGTTCTGATGATGCTACTGAATCAGAACCGGGTGCGAAAGACACCGAGGTTGCCATGTTGGAAGAAACCAGGACTCAGTCTCCGCCTGCGCCGGAGAGGAAAAGGAAGTTTTCACCCATAGTATGGGATCAGGATGACAAGGAAGTCAACGAGTCATCCAGAGTCAGGGGTTCCACTTCTGCGGTGAAGGGGGCGCTTCCTCCTCCACCTCCGTTGCCAAAGGTTTTCTGTCAGTTGCAGTCGCCGAATGTTCCAAATGGTGGAGTTGAAATACATCTTGTCAAGAACAGGGAAACTGAGGAACTTCAGTTGAATGCAGCATCTAAGGTTACCTTGCCCTCTCCTTCAGGTTTGCATTCATTGCCCCCGAAAGGGAGGTGGGATAATGATCAGGAAGCTGAACATCCAGAAGGTGAAGATTATATTCCAACTCGCAATATATCGTCTTCAAGATGGGCAGCTGGAGATAACTCTCCTGTTGATGAGGGTGAGATCCTCAATGATGAGGAAATGCCCAAACGAAGGAGGAGGGTGTCTCCTGAGTTATTGGATGGTAGACTAAGGAACAAGCTATTAAGCCCTGAGGAATCTAAGGTAGAAGGTATTGAAAGAGCTAGGGCCAGATCATCTGAATCTGAAGAAAGAGGTGTCCGTGGGAGAACTTCCAGTGGTGATGATTTTCCTGGTATTGAGTCAGAGAAGGATGACTACATGGAGATTGATGCTCAAGGTGGGGAAAGTGAAACCAGTGTCAGTCACTCAGACACGGATTCTGAAGATGAAGATGATGGCCAGGAGACTCCAGAACCTCCTGCTCAACCTCAAAGAGCTGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACATACGGTGTTGTATATAGGGCTAGGGATAAAAAGACTGGAGAAATTGTAGCATTAAAGAAGGTCAAGATGGAGAAGGAAAAAGAAGGCTTCCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTTGATGTTAAAGAAGTAGTGGTAGGAAGTAGCCTTGATAGTATTTTCATGGTCATGGAATATATGGAACATGACCTTAAAGGACTAATGGAGGCAATGAAGCAACCTTTTAGCCAGAGTGAAGTGAAGTGCTTGATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTAAAGACTTCAAACCTGCTTCTAAATAATAGGGGTGATCTAAAAATTTGTGATTTTGGCTTGGCTCGTCAGTATGGGAGTCCTTTAAAGCCATATACGCATCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTATTCAACAGCCATTGACATGTGGTCTTTAGGTTGTATAATGGCTGAGCTATTGTCTAAGGAGCCACTATTTAATGGGAAAACAGAGTTTGATCAACTTGACAAGATTTTCCGGATTCTTGGCACACCAAATGAAACAATTTGGCCTGGGTTCTCCAAATTACCTGGAGTCAAGGTCAATTTTGTCAAACACCAGTACAACCTCCTGCGTAAAAAGTTTCCTGCCACATCATTCACTGGATCTCCTGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAGAAGCGGATCACTGCCGAAGCTGCTCTAAATCATGAGTGGTTTCGTGAAGTTCCTCTCCCCAAAAGTAAAGAATTCATGCCTACATTTCCTGCTCAACATGCTCAGGACAGGCGTGTGCGGAGAATATACAAGAGTCCGGATCCTTTAGAGGAGCAGCGCCGGAAGGAGTTGCAGCAGGGTGAAACAGGGACTGGTGGAATTTTTGGCTAAGAATGGTGCTTACTAAAGCTGTCTCAACTCTCAATAATCATTCTAACACACTCTGCTGGGTTTAGTGTATGAGGTGAGGGTATGCACTGAATGGAAGTTGGAAGCATTGTTTGTTAGACGATCACTCGTGCTGTTTTTTAGCAGGAACTTGTTGGTTTGGTGGAGATGTATTCTTTTACCTCCTGGGAACCAGATTATTTCAGGTTAACATTCTTGATGCTTGATCATTATATAGAAATGCATCTGGGGCAAGGCTTGCTGCTCAAGGTGTGGCATTATTGGCTTAGGAATTGTCAGTGTCAGCTGAAACTTTGTAACATATCCATTGGCATATTGTATAAACACATTTTATCTGGTTTTGAGTATTAAAGCACTATGGATTTTCTAGCAGCTATTTTCTTTCTTTTTTAATATTCACCTTGTGCTTGCAAGAGACGGTTGGTGTGAAGTGGAAGAGGACCTTCTGTGCATCTTACCAAAGAAATTGAGTGACATTATGCATTGAAAGGTAATGCATTCCTTTGATACTAAGGAATGAGGATATGTATTATCTGTGACAGCAACAATGTCTAGAATCTGAATTTATCCTACTAGCACAACTGATTTTCAGTGttttagttttgtttcttttttttttttttGGGGGGGGGGGGGGAGGTTGGAGGTGATGGAGGGTTTAAAATACTTTTGTTGTGTATTTGTTCATCA

Coding sequences of Glyma.05g145800

Limit To All Plant Sequences

>Glyma.05g145800.1 sequence-type=CDS polypeptide=Glyma.05g145800.1.p locus=Glyma.05g145800 ID=Glyma.05g145800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGGCTGGCAGACATGGCGGTTACCGCGAAAACGAGTTCAGAGAGCGCGAGTCAAAGTTGGAAGTTTCCAGACGCGGCGGATTCGCGAATTCGAAAGAGGATTACGATCGTGTTAGCAATGGTGGCGGTGATGTTGTGAGGGGTGGATCAAGGGATAGGGTTAGGGTGAGGCAGAAGGATATTAAGGAGAGGGAAGATGTTAATGGTGGTGGTTATCGATCCTCTTCGAGTAGGAGTGACTCTGGCAGCAGTGGCCTTGGTCCTCGCCAATGTGGTTTCTCTGTCAAGTCAGTTGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGTTCTGATGATGCTACTGAATCAGAACCGGGTGCGAAAGACACCGAGGTTGCCATGTTGGAAGAAACCAGGACTCAGTCTCCGCCTGCGCCGGAGAGGAAAAGGAAGTTTTCACCCATAGTATGGGATCAGGATGACAAGGAAGTCAACGAGTCATCCAGAGTCAGGGGTTCCACTTCTGCGGTGAAGGGGGCGCTTCCTCCTCCACCTCCGTTGCCAAAGGTTTTCTGTCAGTTGCAGTCGCCGAATGTTCCAAATGGTGGAGTTGAAATACATCTTGTCAAGAACAGGGAAACTGAGGAACTTCAGTTGAATGCAGCATCTAAGGTTACCTTGCCCTCTCCTTCAGGTTTGCATTCATTGCCCCCGAAAGGGAGGTGGGATAATGATCAGGAAGCTGAACATCCAGAAGGTGAAGATTATATTCCAACTCGCAATATATCGTCTTCAAGATGGGCAGCTGGAGATAACTCTCCTGTTGATGAGGGTGAGATCCTCAATGATGAGGAAATGCCCAAACGAAGGAGGAGGGTGTCTCCTGAGTTATTGGATGGTAGACTAAGGAACAAGCTATTAAGCCCTGAGGAATCTAAGGTAGAAGGTATTGAAAGAGCTAGGGCCAGATCATCTGAATCTGAAGAAAGAGGTGTCCGTGGGAGAACTTCCAGTGGTGATGATTTTCCTGGTATTGAGTCAGAGAAGGATGACTACATGGAGATTGATGCTCAAGGTGGGGAAAGTGAAACCAGTGTCAGTCACTCAGACACGGATTCTGAAGATGAAGATGATGGCCAGGAGACTCCAGAACCTCCTGCTCAACCTCAAAGAGCTGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACATACGGTGTTGTATATAGGGCTAGGGATAAAAAGACTGGAGAAATTGTAGCATTAAAGAAGGTCAAGATGGAGAAGGAAAAAGAAGGCTTCCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTTGATGTTAAAGAAGTAGTGGTAGGAAGTAGCCTTGATAGTATTTTCATGGTCATGGAATATATGGAACATGACCTTAAAGGACTAATGGAGGCAATGAAGCAACCTTTTAGCCAGAGTGAAGTGAAGTGCTTGATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTAAAGACTTCAAACCTGCTTCTAAATAATAGGGGTGATCTAAAAATTTGTGATTTTGGCTTGGCTCGTCAGTATGGGAGTCCTTTAAAGCCATATACGCATCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTATTCAACAGCCATTGACATGTGGTCTTTAGGTTGTATAATGGCTGAGCTATTGTCTAAGGAGCCACTATTTAATGGGAAAACAGAGTTTGATCAACTTGACAAGATTTTCCGGATTCTTGGCACACCAAATGAAACAATTTGGCCTGGGTTCTCCAAATTACCTGGAGTCAAGGTCAATTTTGTCAAACACCAGTACAACCTCCTGCGTAAAAAGTTTCCTGCCACATCATTCACTGGATCTCCTGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAGAAGCGGATCACTGCCGAAGCTGCTCTAAATCATGAGTGGTTTCGTGAAGTTCCTCTCCCCAAAAGTAAAGAATTCATGCCTACATTTCCTGCTCAACATGCTCAGGACAGGCGTGTGCGGAGAATATACAAGAGTCCGGATCCTTTAGAGGAGCAGCGCCGGAAGGAGTTGCAGCAGGGTGAAACAGGGACTGGTGGAATTTTTGGCTAA

>Glyma.05g145800.2 sequence-type=CDS polypeptide=Glyma.05g145800.2.p locus=Glyma.05g145800 ID=Glyma.05g145800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCGGCTGGCAGACATGGCGGTTACCGCGAAAACGAGTTCAGAGAGCGCGAGTCAAAGTTGGAAGTTTCCAGACGCGGCGGATTCGCGAATTCGAAAGAGGATTACGATCGTGTTAGCAATGGTGGCGGTGATGTTGTGAGGGGTGGATCAAGGGATAGGGTTAGGGTGAGGCAGAAGGATATTAAGGAGAGGGAAGATGTTAATGGTGGTGGTTATCGATCCTCTTCGAGTAGGAGTGACTCTGGCAGCAGTGGCCTTGGTCCTCGCCAATGTGGTTTCTCTGTCAAGTCAGTTGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGTTCTGATGATGCTACTGAATCAGAACCGGGTGCGAAAGACACCGAGGTTGCCATGTTGGAAGAAACCAGGACTCAGTCTCCGCCTGCGCCGGAGAGGAAAAGGAAGTTTTCACCCATAGTATGGGATCAGGATGACAAGGAAGTCAACGAGTCATCCAGAGTCAGGGGTTCCACTTCTGCGGTGAAGGGGGCGCTTCCTCCTCCACCTCCGTTGCCAAAGGTTTTCTGTCAGTTGCAGTCGCCGAATGTTCCAAATGGTGGAGTTGAAATACATCTTGTCAAGAACAGGGAAACTGAGGAACTTCAGTTGAATGCAGCATCTAAGGTTACCTTGCCCTCTCCTTCAGGTTTGCATTCATTGCCCCCGAAAGGGAGGTGGGATAATGATCAGGAAGCTGAACATCCAGAAGGTGAAGATTATATTCCAACTCGCAATATATCGTCTTCAAGATGGGCAGCTGGAGATAACTCTCCTGTTGATGAGGGTGAGATCCTCAATGATGAGGAAATGCCCAAACGAAGGAGGAGGGTGTCTCCTGAGTTATTGGATGGTAGACTAAGGAACAAGCTATTAAGCCCTGAGGAATCTAAGGTAGAAGGTATTGAAAGAGCTAGGGCCAGATCATCTGAATCTGAAGAAAGAGGTGTCCGTGGGAGAACTTCCAGTGGTGATGATTTTCCTGGTATTGAGTCAGAGAAGGATGACTACATGGAGATTGATGCTCAAGGTGGGGAAAGTGAAACCAGTGTCAGTCACTCAGACACGGATTCTGAAGATGAAGATGATGGCCAGGAGACTCCAGAACCTCCTGCTCAACCTCAAAGAGCTGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACATACGGTGTTGTATATAGGGCTAGGGATAAAAAGACTGGAGAAATTGTAGCATTAAAGAAGGTCAAGATGGAGAAGGAAAAAGAAGGCTTCCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCCATAGTTGATGTTAAAGAAGTAGTGGTAGGAAGTAGCCTTGATAGTATTTTCATGGTCATGGAATATATGGAACATGACCTTAAAGGACTAATGGAGGCAATGAAGCAACCTTTTAGCCAGAGTGAAGTGAAGTGCTTGATGATCCAGCTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTAAAGACTTCAAACCTGCTTCTAAATAATAGGGGTGATCTAAAAATTTGTGATTTTGGCTTGGCTCGTCAGTATGGGAGTCCTTTAAAGCCATATACGCATCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTATTCAACAGCCATTGACATGTGGTCTTTAGGTTGTATAATGGCTGAGCTATTGTCTAAGGAGCCACTATTTAATGGGAAAACAGAGTTTGATCAACTTGACAAGATTTTCCGGATTCTTGGCACACCAAATGAAACAATTTGGCCTGGGTTCTCCAAATTACCTGGAGTCAAGGTCAATTTTGTCAAACACCAGTACAACCTCCTGCGTAAAAAGTTTCCTGCCACATCATTCACTGGATCTCCTGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAGAAGCGGATCACTGCCGAAGCTGCTCTAAATCATGAGTGGTTTCGTGAAGTTCCTCTCCCCAAAAGTAAAGAATTCATGCCTACATTTCCTGCTCAACATGCTCAGGACAGGCGTGTGCGGAGAATATACAAGAGTCCGGATCCTTTAGAGGAGCAGCGCCGGAAGGAGTTGCAGCAGGGTGAAACAGGGACTGGTGGAATTTTTGGCTAA

Predicted protein sequences of Glyma.05g145800

Limit To All Plant Sequences

>Glyma.05g145800.1.p sequence-type=predicted peptide transcript=Glyma.05g145800.1 locus=Glyma.05g145800 ID=Glyma.05g145800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAAGRHGGYRENEFRERESKLEVSRRGGFANSKEDYDRVSNGGGDVVRGGSRDRVRVRQKDIKEREDVNGGGYRSSSSRSDSGSSGLGPRQCGFSVKSVDREPGELSSESGSDDATESEPGAKDTEVAMLEETRTQSPPAPERKRKFSPIVWDQDDKEVNESSRVRGSTSAVKGALPPPPPLPKVFCQLQSPNVPNGGVEIHLVKNRETEELQLNAASKVTLPSPSGLHSLPPKGRWDNDQEAEHPEGEDYIPTRNISSSRWAAGDNSPVDEGEILNDEEMPKRRRRVSPELLDGRLRNKLLSPEESKVEGIERARARSSESEERGVRGRTSSGDDFPGIESEKDDYMEIDAQGGESETSVSHSDTDSEDEDDGQETPEPPAQPQRAVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGDLKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRVRRIYKSPDPLEEQRRKELQQGETGTGGIFG*

>Glyma.05g145800.2.p sequence-type=predicted peptide transcript=Glyma.05g145800.2 locus=Glyma.05g145800 ID=Glyma.05g145800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAAGRHGGYRENEFRERESKLEVSRRGGFANSKEDYDRVSNGGGDVVRGGSRDRVRVRQKDIKEREDVNGGGYRSSSSRSDSGSSGLGPRQCGFSVKSVDREPGELSSESGSDDATESEPGAKDTEVAMLEETRTQSPPAPERKRKFSPIVWDQDDKEVNESSRVRGSTSAVKGALPPPPPLPKVFCQLQSPNVPNGGVEIHLVKNRETEELQLNAASKVTLPSPSGLHSLPPKGRWDNDQEAEHPEGEDYIPTRNISSSRWAAGDNSPVDEGEILNDEEMPKRRRRVSPELLDGRLRNKLLSPEESKVEGIERARARSSESEERGVRGRTSSGDDFPGIESEKDDYMEIDAQGGESETSVSHSDTDSEDEDDGQETPEPPAQPQRAVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGDLKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRVRRIYKSPDPLEEQRRKELQQGETGTGGIFG*

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