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Report for Sequence Feature Glyma.05g140800

Feature Type:gene_model
Chromosome:Gm05
Start:33410487
stop:33419300
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G46210.1AT ATCUL4,CUL4 JGI N/AIEA
GO:0006511GO-bp ubiquitin-dependent protein catabolic process JGI N/AIEA
GO:0031625GO-mf ubiquitin protein ligase binding JGI N/AIEA
K10609KEGG Exosome JGI N/AIEA
PTHR11932PantherFam CULLIN JGI N/AIEA
PF00888Pfam Cullin family JGI N/AIEA
PF10557Pfam Cullin protein neddylation domain JGI N/AIEA

Corresponding NameAnnotation VersionEvidenceComments
Glyma05g27240 Wm82.a1.v1.1IGC As supplied by JGI


>Glyma.05g140800.1 sequence-type=CDS polypeptide=Glyma.05g140800.1.p locus=Glyma.05g140800 id=Glyma.05g140800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTAATACGAAACTGTCACCGCCTATGAAGAAGGCGAAATCTATCGACTCCAAGAACGACGACGCCGTTTTGAAATCCCCCGCCGCCGCTTCCGATGACCCCAATGCGCCCGCTCTCGTCGCCGCCAATCTGTCTCGCAAAAAAGCCACTCCTCCCCATCCCCCCAAGAAGCTCCTCATTAAGTTCCACAAAGGTATACCAACATTGCCCCCAAATTTTGAGGAGGATACATGGGCAAAATTGAAGTCAGCTATTGGTGCTATATTCTTGAAGCAACCTGTTTCTTGTGACTTGGAGAATCTTTATCAGGCTGTGAATGATCTTTGCCTTTACAAAATGGGGGGAAATCTTTATCAACGAATTGAAAAGGAGTGTGAAGCACATATATCTGCAGCACTGCAGTCTTTAGTTGGCCAAAGCCCAGATTTGATTGTTTTTCTATCGCTAGTTGAGAGATGTTGGCAGGATCTTTGTGACCAAATGTTGATGATTCGTGGTATAGCCTTGTTTCTGGATAGGACGTATGTGAAACAAACAACAAATGTACAGTCATTATGGGACATGGGTTTGCAACTTTTCTGCAAATATCTTTCTCTATCTCCAGAAGTAGAACATAAAACTGTTACTGGTCTTCTTCGTATGATCGGAAGTGAAAGATCAGGTGAATCAGTGGATAGAACTCTTCTAAATCATCTTTTGAAGATGTTTACTGCTCTGGGAATTTATGCAGAAACCTTTGAGAAGCCATTCCTTGAGTGCACATCCGAATTTTATGCTGCTGAAGGTATGAAATACATGCAGCAATCAGATGCTCCAGATTACTTGAAGCATGTTGAGACAAGATTGCAAGAGGAACATGAAAGATGTTTGTTGTACTTGGATGCAAGTACTAGGAAACCATTGATAGCAACTGCGGAAAAGCAACTTCTTGAACGTCATATACCTGCCATTCTTGATAAGGGTTTTACTGTGCTTATGGATGGGAATCGTATTGAAGACCTTCAGAGAATGCACTCGCTCTTTTCAAGGGTCAATGCTCTTGAATCACTGAAGCAGGCCCTTAGTTCATACATCAGGAGAACTGGGCAGGGCATTGTTATGGATGAGGAGAAAGATAAAGATATGGTCTCATCCCTTCTTGAATTTAAGGCTTCTCTTGACACAATATGGGAAGAAAGCTTTTTCAAGAATGAAGCTTTCAGCAATTCAATTAAAGATGCATTTGAGTATCTTATCAATCTTCGTCAGAACCGACCTGCAGAGTTGATTGCCAAGTTTTTGGATGAGAAGCTTCGTGCAGGTAATAAGGGTACTTCTGAAGAGGAACTGGAGGCTACACTTGATAAAGTCCTGGTGTTATTCAGGTTCATTCAGGGCAAGGATGTATTTGAAGCATTCTATAAGAAAGATCTTGCTAAAAGACTGCTTTTAGGAAAGAGTGCTTCTATTGACGCTGAGAAATCTATGATCTCCAAGTTGAAGACTGAGTGTGGCAGCCAGTTCACAAACAAACTGGAAGGAATGTTTAAGGACATTGAATTATCAAAAGAAATAAATGATTCATTCAAACAGTCATCACAGGCGAGGTCAAAACTTGCATCAGGGATTGAAATGAGTGTTCATGTTTTAACTACAGGGCACTGGCCAACATATCCGCCCATGGATGTTAGACTTCCTCATGAATTGAATGTTTACCAGGATATTTTCAAAGAGTTCTATCTAAGCAAATACAGTGGAAGACGTCTGATGTGGCAAAATTCACTAGGTCATTGTGTCTTGAAGGCAGAGTTTCCCAAAGGAAGAAAGGAGTTGGCTGTGTCCCTATTTCAGACTGTTGTTCTAATGTTATTCAATGATGCTGAGAAGCTAAGTCTTCAAGATATCAAAGATGCTACTGGTATTGAGGACAAGGAACTCAGAAGGACTCTGCAATCACTAGCTTGTGGTAAAGTTCGTGTCCTACAAAAGATGCCCAAAGGAAGAGATGTGGAGGACGATGACTTATTTGTTTTTAATGATGGGTTTACAGCTCCTCTTTACCGTATAAAGGTGAATGCAATTCAATTGAAGGAGACAGTCGAGGAGAACACAAGCACCACCGAAAGAGTTTTCCATGACCGTCAATATCAGATTGATGCTGCTATTGTGAGGATAATGAAGACTAGAAAAGTGCTTAGTCACACCCTTCTTATTACTGAACTCTTCCAACAGCTGAAATTCCCAATAAAACCAGCTGATTTGAAAAAAAGGATTGAAAGCCTCATTGACAGGGAGTATCTAGAGAGGGACAAGAGCAATCCTCAAATATACAATTACCTCGCATAA

>Glyma.05g140800.1.p sequence-type=predicted peptide transcript=Glyma.05g140800.1 locus=Glyma.05g140800 id=Glyma.05g140800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSNTKLSPPMKKAKSIDSKNDDAVLKSPAAASDDPNAPALVAANLSRKKATPPHPPKKLLIKFHKGIPTLPPNFEEDTWAKLKSAIGAIFLKQPVSCDLENLYQAVNDLCLYKMGGNLYQRIEKECEAHISAALQSLVGQSPDLIVFLSLVERCWQDLCDQMLMIRGIALFLDRTYVKQTTNVQSLWDMGLQLFCKYLSLSPEVEHKTVTGLLRMIGSERSGESVDRTLLNHLLKMFTALGIYAETFEKPFLECTSEFYAAEGMKYMQQSDAPDYLKHVETRLQEEHERCLLYLDASTRKPLIATAEKQLLERHIPAILDKGFTVLMDGNRIEDLQRMHSLFSRVNALESLKQALSSYIRRTGQGIVMDEEKDKDMVSSLLEFKASLDTIWEESFFKNEAFSNSIKDAFEYLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEATLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINDSFKQSSQARSKLASGIEMSVHVLTTGHWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGRKELAVSLFQTVVLMLFNDAEKLSLQDIKDATGIEDKELRRTLQSLACGKVRVLQKMPKGRDVEDDDLFVFNDGFTAPLYRIKVNAIQLKETVEENTSTTERVFHDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA*







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