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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G02170.1 | AT | Remorin family protein | JGI | N/A | IEA |
PF03763 | PFAM | Remorin, C-terminal region | JGI | N/A | IEA |
Glyma.05g135700 not represented in the dataset |
Glyma.05g135700 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.08g090800 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma05g26610 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.05g135700.2 sequence-type=transcript locus=Glyma.05g135700 ID=Glyma.05g135700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 TAACAAAAGGGATTAACATTATATGGGGCGGGGAAGTGGTCCACAAAAGCCGATGTAGTACAACAGGTCAGAGACAGGGCCGTCTATTACTGGATCTTCTTGTCTTCCAActctctctctctctctctctTGTGAAGGCTCTCACTTTTGCAACTCAAAAGCTTCAAACCCAAAGAAGTAGTACTTGGCTTATAGCCAGTGATGAACACTAACTGCATTATGTAAAGATTGCATTTTTGCTCCCACAAGGACAACCCATTTGTCAAATATGGATTACGAGAGGATCCAAAAGCCTCAGGGTGTTGGGGGATTTTCGCCTGGAAAATTGAGGAGCATGCTACTGGGTGTGGagaagaagagaaaagaagaggaagaGCTTGATTCTACTTTGACCACGAGATCTCAGAATTCAGACATGGATGAATCTGGTGGTAGCAGTTCTGATCATTGTAAAGACGTAGATGTTGTGAGTGTCCTTCCTGATTATTCAACTTCTGCTATAGTTCGCACTAGTAGCATAGAGGCAGTTGGTGGTGATCGTTTTGTGAAGGCCAATGCAGCAGTGAATTCAAGGAATAGAGTCTTAGAAGACCCTTCTTCAGATTATGATAGTGGGCACGATAATATGAGCATGTCCTCATCAATGTTCGAATTTCAAAAGGCGGAGCGTGCCCCACAGAGGGTGCCCGTGGGGCCATTCTCAAAACCAGCACCATCTAAATGGGATGATGCACAGAAGTGGATAGCAAGTCCAACTTCAAACAGGCCAAAGACAGCGCAGACCCAGGGGCAAGGTGGGCATGCAGGACCGCGTAAGGCTGGTAGTCTTGGTTATGGAAGCCGGCAATCTTCGATGAAGGTTGTTGTTGAAGTTCCAGATCAAAAAGAAATTGCTTTAGATGAACCAGATACCAAGAAAATTGATACAAATCAAACTAAGATGGATAGTGGAGGACAGAAATTTGTGAGTTGGGAGGCTGATCCCTATGCAATTGCAAGTTTTTGTGCTCGGTCTGTGTCAATGAGAGATATGGGTACCGAAATGACCCCTATTGCTAGCCAGGAGCCATCAAGAACAGGTACCCCAGTGAGGGCAACAACACCAATGCGCAGCCCTAATTCTTCCCGGCCTTCTACTCCCCCCAGAGCCTCCCCTGCATCTACTTTAACTGATCTACATAGTGACAATCTGAATCTCAACATGAATGAGTTGTCCGAAAAGGAGCTACAAATGAAAACAAGGCGAGAAATAATGGTTCTCGGGACACAACTAGGTAAAATGAACATTGCTGCCTGGGCTAGCAAAGAAGAGGAGGATAAGGATGCATCCACTTCCCTGAAAACAAAAGCAGAATTACCTAAGAGTGTCGTTGAAGCACGTGCAGCAGCATGGGAGGAGGCTGAGAAGGCCAAGTACATGGCCAGGTTTAGGCGTGAGGAGATGAAAATTCAAGCATGGGAAAATCACCAGAAAGCAAAAACAGAAGCCAAGATGAGAAAAATTGAGGTAGAAGTTGAAAGGATACAAGGTAAGGCACAAGATAAGCTAACGAATAAATTAGCAGCTGCAAGGCATAAGGCCGAGGAAAAGCGTGCAGCAGCAGAAGCCAATAGAAATCATCAAGCTGCAAAAACTGAAGAGCAAGCAGAGTATATACGAAGAACTGGTCATGTCCCTTCCTCATATTTATCATTTTCTTGCTGCAATTGGTGCTCTTAAAAAAAGCCAATCTTTGTCAATGTTTATTTTTTGTTTCTATAGGTATGAAATGCCTTTTGCTGCTTACACCCAAGCATGTTAAATATGCCTGTTGCATTTCCCTCCTGGTGTAAAATGTTACATTGTTCTGAAGAATAATTGCAATTTGAAAGTGCTTTGCTATTTGTTCAGTTTTTATTTTCTGATCATTAGAATTCGGATTTTGGACCTAATTCAGTCCAAAAGTTAAGGTAACTTGTGAAGTGAGGGTTGACTTACTGTTTTTGGCATCACTGTCAGTACGAAAATTTCAACATGCTCTTCTTATATCGAGGACTGAACATGGGTTTTA >Glyma.05g135700.3 sequence-type=transcript locus=Glyma.05g135700 ID=Glyma.05g135700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 GTGGAAATTTGGCAGTATACTATGATTTAAATTATATGCAAAAGGGTGAAGAAAGTGAAGAAAAGGGAACAAGTCATTCTTTGATACATAATGTACTTGATATTTCATATATGGTGGTAGCAGTTCTGATCATTGTAAAGACGTAGATGTTGTGAGTGTCCTTCCTGATTATTCAACTTCTGCTATAGTTCGCACTAGTAGCATAGAGGCAGTTGGTGGTGATCGTTTTGTGAAGGCCAATGCAGCAGTGAATTCAAGGAATAGAGTCTTAGAAGACCCTTCTTCAGATTATGATAGTGGGCACGATAATATGAGCATGTCCTCATCAATGTTCGAATTTCAAAAGGCGGAGCGTGCCCCACAGAGGGTGCCCGTGGGGCCATTCTCAAAACCAGCACCATCTAAATGGGATGATGCACAGAAGTGGATAGCAAGTCCAACTTCAAACAGGCCAAAGACAGCGCAGACCCAGGGGCAAGGTGGGCATGCAGGACCGCGTAAGGCTGGTAGTCTTGGTTATGGAAGCCGGCAATCTTCGATGAAGGTTGTTGTTGAAGTTCCAGATCAAAAAGAAATTGCTTTAGATGAACCAGATACCAAGAAAATTGATACAAATCAAACTAAGATGGATAGTGGAGGACAGAAATTTGTGAGTTGGGAGGCTGATCCCTATGCAATTGCAAGTTTTTGTGTTAGTCTCAGCCAGCACAATTTATCTCTTGCAATCCAAAATGAAACAACATTTGTTCCTCCCCCTTCAACAGCTCGGTCTGTGTCAATGAGAGATATGGGTACCGAAATGACCCCTATTGCTAGCCAGGAGCCATCAAGAACAGGTACCCCAGTGAGGGCAACAACACCAATGCGCAGCCCTAATTCTTCCCGGCCTTCTACTCCCCCCAGAGCCTCCCCTGCATCTACTTTAACTGATCTACATAGTGACAATCTGAATCTCAACATGAATGAGTTGTCCGAAAAGGAGCTACAAATGAAAACAAGGCGAGAAATAATGGTTCTCGGGACACAACTAGGTAAAATGAACATTGCTGCCTGGGCTAGCAAAGAAGAGGAGGATAAGGATGCATCCACTTCCCTGAAAACAAAAGCAGAATTACCTAAGAGTGTCGTTGAAGCACGTGCAGCAGCATGGGAGGAGGCTGAGAAGGCCAAGTACATGGCCAGGTTTAGGCGTGAGGAGATGAAAATTCAAGCATGGGAAAATCACCAGAAAGCAAAAACAGAAGCCAAGATGAGAAAAATTGAGGTAGAAGTTGAAAGGATACAAGGTAAGGCACAAGATAAGCTAACGAATAAATTAGCAGCTGCAAGGCATAAGGCCGAGGAAAAGCGTGCAGCAGCAGAAGCCAATAGAAATCATCAAGCTGCAAAAACTGAAGAGCAAGCAGAGTATATACGAAGAACTGGTCATGTCCCTTCCTCATATTTATCATTTTCTTGCTGCAATTGGTGCTCTTAAAAAAAGCCAATCTTTGTCAATGTTTATTTTTTGTTTCTATAGGTATGAAATGCCTTTTGCTGCTTACACCCAAGCATGTTAAATATGCCTGTTGCATTTCCCTCCTGGTGTAAAATGTTACATTGTTCTGAAGAATAATTGCAATTTGAAAGTGCTTTGCTATTTGTTCAGTTTTTATTTTCTGATCATTAGAATTCGGATTTTGGACCTAATTCAGTCCAAAAGTTAAGGTAACTTGTGAAGTGAGGGTTGACTTACTGTTTTTGGCATCACTGTCAGTACGAAAATTTCAACATGCTCTTCTTATATCGAGGACTGAACATGGGTTTTA
>Glyma.05g135700.1 sequence-type=CDS polypeptide=Glyma.05g135700.1.p locus=Glyma.05g135700 ID=Glyma.05g135700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGATTACGAGAGGATCCAAAAGCCTCAGGGTGTTGGGGGATTTTCGCCTGGAAAATTGAGGAGCATGCTACTGGGTGTGGAGAAGAAGAGAAAAGAAGAGGAAGAGCTTGATTCTACTTTGACCACGAGATCTCAGAATTCAGACATGGATGAATCTGGTGGTAGCAGTTCTGATCATTGTAAAGACGTAGATGTTGTGAGTGTCCTTCCTGATTATTCAACTTCTGCTATAGTTCGCACTAGTAGCATAGAGGCAGTTGGTGGTGATCGTTTTGTGAAGGCCAATGCAGCAGTGAATTCAAGGAATAGAGTCTTAGAAGACCCTTCTTCAGATTATGATAGTGGGCACGATAATATGAGCATGTCCTCATCAATGTTCGAATTTCAAAAGGCGGAGCGTGCCCCACAGAGGGTGCCCGTGGGGCCATTCTCAAAACCAGCACCATCTAAATGGGATGATGCACAGAAGTGGATAGCAAGTCCAACTTCAAACAGGCCAAAGACAGCGCAGACCCAGGGGCAAGGTGGGCATGCAGGACCGCGTAAGGCTGGTAGTCTTGGTTATGGAAGCCGGCAATCTTCGATGAAGGTTGTTGTTGAAGTTCCAGATCAAAAAGAAATTGCTTTAGATGAACCAGATACCAAGAAAATTGATACAAATCAAACTAAGATGGATAGTGGAGGACAGAAATTTGTGAGTTGGGAGGCTGATCCCTATGCAATTGCAAGTTTTTGTGTTAGTCTCAGCCAGCACAATTTATCTCTTGCAATCCAAAATGAAACAACATTTGTTCCTCCCCCTTCAACAGCTCGGTCTGTGTCAATGAGAGATATGGGTACCGAAATGACCCCTATTGCTAGCCAGGAGCCATCAAGAACAGGTACCCCAGTGAGGGCAACAACACCAATGCGCAGCCCTAATTCTTCCCGGCCTTCTACTCCCCCCAGAGCCTCCCCTGCATCTACTTTAACTGATCTACATAGTGACAATCTGAATCTCAACATGAATGAGTTGTCCGAAAAGGAGCTACAAATGAAAACAAGGCGAGAAATAATGGTTCTCGGGACACAACTAGGTAAAATGAACATTGCTGCCTGGGCTAGCAAAGAAGAGGAGGATAAGGATGCATCCACTTCCCTGAAAACAAAAGCAGAATTACCTAAGAGTGTCGTTGAAGCACGTGCAGCAGCATGGGAGGAGGCTGAGAAGGCCAAGTACATGGCCAGGTTTAGGCGTGAGGAGATGAAAATTCAAGCATGGGAAAATCACCAGAAAGCAAAAACAGAAGCCAAGATGAGAAAAATTGAGGTAGAAGTTGAAAGGATACAAGGTAAGGCACAAGATAAGCTAACGAATAAATTAGCAGCTGCAAGGCATAAGGCCGAGGAAAAGCGTGCAGCAGCAGAAGCCAATAGAAATCATCAAGCTGCAAAAACTGAAGAGCAAGCAGAGTATATACGAAGAACTGGTCATGTCCCTTCCTCATATTTATCATTTTCTTGCTGCAATTGGTGCTCTTAA >Glyma.05g135700.2 sequence-type=CDS polypeptide=Glyma.05g135700.2.p locus=Glyma.05g135700 ID=Glyma.05g135700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGATTACGAGAGGATCCAAAAGCCTCAGGGTGTTGGGGGATTTTCGCCTGGAAAATTGAGGAGCATGCTACTGGGTGTGGAGAAGAAGAGAAAAGAAGAGGAAGAGCTTGATTCTACTTTGACCACGAGATCTCAGAATTCAGACATGGATGAATCTGGTGGTAGCAGTTCTGATCATTGTAAAGACGTAGATGTTGTGAGTGTCCTTCCTGATTATTCAACTTCTGCTATAGTTCGCACTAGTAGCATAGAGGCAGTTGGTGGTGATCGTTTTGTGAAGGCCAATGCAGCAGTGAATTCAAGGAATAGAGTCTTAGAAGACCCTTCTTCAGATTATGATAGTGGGCACGATAATATGAGCATGTCCTCATCAATGTTCGAATTTCAAAAGGCGGAGCGTGCCCCACAGAGGGTGCCCGTGGGGCCATTCTCAAAACCAGCACCATCTAAATGGGATGATGCACAGAAGTGGATAGCAAGTCCAACTTCAAACAGGCCAAAGACAGCGCAGACCCAGGGGCAAGGTGGGCATGCAGGACCGCGTAAGGCTGGTAGTCTTGGTTATGGAAGCCGGCAATCTTCGATGAAGGTTGTTGTTGAAGTTCCAGATCAAAAAGAAATTGCTTTAGATGAACCAGATACCAAGAAAATTGATACAAATCAAACTAAGATGGATAGTGGAGGACAGAAATTTGTGAGTTGGGAGGCTGATCCCTATGCAATTGCAAGTTTTTGTGCTCGGTCTGTGTCAATGAGAGATATGGGTACCGAAATGACCCCTATTGCTAGCCAGGAGCCATCAAGAACAGGTACCCCAGTGAGGGCAACAACACCAATGCGCAGCCCTAATTCTTCCCGGCCTTCTACTCCCCCCAGAGCCTCCCCTGCATCTACTTTAACTGATCTACATAGTGACAATCTGAATCTCAACATGAATGAGTTGTCCGAAAAGGAGCTACAAATGAAAACAAGGCGAGAAATAATGGTTCTCGGGACACAACTAGGTAAAATGAACATTGCTGCCTGGGCTAGCAAAGAAGAGGAGGATAAGGATGCATCCACTTCCCTGAAAACAAAAGCAGAATTACCTAAGAGTGTCGTTGAAGCACGTGCAGCAGCATGGGAGGAGGCTGAGAAGGCCAAGTACATGGCCAGGTTTAGGCGTGAGGAGATGAAAATTCAAGCATGGGAAAATCACCAGAAAGCAAAAACAGAAGCCAAGATGAGAAAAATTGAGGTAGAAGTTGAAAGGATACAAGGTAAGGCACAAGATAAGCTAACGAATAAATTAGCAGCTGCAAGGCATAAGGCCGAGGAAAAGCGTGCAGCAGCAGAAGCCAATAGAAATCATCAAGCTGCAAAAACTGAAGAGCAAGCAGAGTATATACGAAGAACTGGTCATGTCCCTTCCTCATATTTATCATTTTCTTGCTGCAATTGGTGCTCTTAA >Glyma.05g135700.3 sequence-type=CDS polypeptide=Glyma.05g135700.3.p locus=Glyma.05g135700 ID=Glyma.05g135700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGAGCATGTCCTCATCAATGTTCGAATTTCAAAAGGCGGAGCGTGCCCCACAGAGGGTGCCCGTGGGGCCATTCTCAAAACCAGCACCATCTAAATGGGATGATGCACAGAAGTGGATAGCAAGTCCAACTTCAAACAGGCCAAAGACAGCGCAGACCCAGGGGCAAGGTGGGCATGCAGGACCGCGTAAGGCTGGTAGTCTTGGTTATGGAAGCCGGCAATCTTCGATGAAGGTTGTTGTTGAAGTTCCAGATCAAAAAGAAATTGCTTTAGATGAACCAGATACCAAGAAAATTGATACAAATCAAACTAAGATGGATAGTGGAGGACAGAAATTTGTGAGTTGGGAGGCTGATCCCTATGCAATTGCAAGTTTTTGTGTTAGTCTCAGCCAGCACAATTTATCTCTTGCAATCCAAAATGAAACAACATTTGTTCCTCCCCCTTCAACAGCTCGGTCTGTGTCAATGAGAGATATGGGTACCGAAATGACCCCTATTGCTAGCCAGGAGCCATCAAGAACAGGTACCCCAGTGAGGGCAACAACACCAATGCGCAGCCCTAATTCTTCCCGGCCTTCTACTCCCCCCAGAGCCTCCCCTGCATCTACTTTAACTGATCTACATAGTGACAATCTGAATCTCAACATGAATGAGTTGTCCGAAAAGGAGCTACAAATGAAAACAAGGCGAGAAATAATGGTTCTCGGGACACAACTAGGTAAAATGAACATTGCTGCCTGGGCTAGCAAAGAAGAGGAGGATAAGGATGCATCCACTTCCCTGAAAACAAAAGCAGAATTACCTAAGAGTGTCGTTGAAGCACGTGCAGCAGCATGGGAGGAGGCTGAGAAGGCCAAGTACATGGCCAGGTTTAGGCGTGAGGAGATGAAAATTCAAGCATGGGAAAATCACCAGAAAGCAAAAACAGAAGCCAAGATGAGAAAAATTGAGGTAGAAGTTGAAAGGATACAAGGTAAGGCACAAGATAAGCTAACGAATAAATTAGCAGCTGCAAGGCATAAGGCCGAGGAAAAGCGTGCAGCAGCAGAAGCCAATAGAAATCATCAAGCTGCAAAAACTGAAGAGCAAGCAGAGTATATACGAAGAACTGGTCATGTCCCTTCCTCATATTTATCATTTTCTTGCTGCAATTGGTGCTCTTAA
>Glyma.05g135700.1.p sequence-type=predicted peptide transcript=Glyma.05g135700.1 locus=Glyma.05g135700 ID=Glyma.05g135700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MDYERIQKPQGVGGFSPGKLRSMLLGVEKKRKEEEELDSTLTTRSQNSDMDESGGSSSDHCKDVDVVSVLPDYSTSAIVRTSSIEAVGGDRFVKANAAVNSRNRVLEDPSSDYDSGHDNMSMSSSMFEFQKAERAPQRVPVGPFSKPAPSKWDDAQKWIASPTSNRPKTAQTQGQGGHAGPRKAGSLGYGSRQSSMKVVVEVPDQKEIALDEPDTKKIDTNQTKMDSGGQKFVSWEADPYAIASFCVSLSQHNLSLAIQNETTFVPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVRATTPMRSPNSSRPSTPPRASPASTLTDLHSDNLNLNMNELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKTKAELPKSVVEARAAAWEEAEKAKYMARFRREEMKIQAWENHQKAKTEAKMRKIEVEVERIQGKAQDKLTNKLAAARHKAEEKRAAAEANRNHQAAKTEEQAEYIRRTGHVPSSYLSFSCCNWCS* >Glyma.05g135700.2.p sequence-type=predicted peptide transcript=Glyma.05g135700.2 locus=Glyma.05g135700 ID=Glyma.05g135700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MDYERIQKPQGVGGFSPGKLRSMLLGVEKKRKEEEELDSTLTTRSQNSDMDESGGSSSDHCKDVDVVSVLPDYSTSAIVRTSSIEAVGGDRFVKANAAVNSRNRVLEDPSSDYDSGHDNMSMSSSMFEFQKAERAPQRVPVGPFSKPAPSKWDDAQKWIASPTSNRPKTAQTQGQGGHAGPRKAGSLGYGSRQSSMKVVVEVPDQKEIALDEPDTKKIDTNQTKMDSGGQKFVSWEADPYAIASFCARSVSMRDMGTEMTPIASQEPSRTGTPVRATTPMRSPNSSRPSTPPRASPASTLTDLHSDNLNLNMNELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKTKAELPKSVVEARAAAWEEAEKAKYMARFRREEMKIQAWENHQKAKTEAKMRKIEVEVERIQGKAQDKLTNKLAAARHKAEEKRAAAEANRNHQAAKTEEQAEYIRRTGHVPSSYLSFSCCNWCS* >Glyma.05g135700.3.p sequence-type=predicted peptide transcript=Glyma.05g135700.3 locus=Glyma.05g135700 ID=Glyma.05g135700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 MSMSSSMFEFQKAERAPQRVPVGPFSKPAPSKWDDAQKWIASPTSNRPKTAQTQGQGGHAGPRKAGSLGYGSRQSSMKVVVEVPDQKEIALDEPDTKKIDTNQTKMDSGGQKFVSWEADPYAIASFCVSLSQHNLSLAIQNETTFVPPPSTARSVSMRDMGTEMTPIASQEPSRTGTPVRATTPMRSPNSSRPSTPPRASPASTLTDLHSDNLNLNMNELSEKELQMKTRREIMVLGTQLGKMNIAAWASKEEEDKDASTSLKTKAELPKSVVEARAAAWEEAEKAKYMARFRREEMKIQAWENHQKAKTEAKMRKIEVEVERIQGKAQDKLTNKLAAARHKAEEKRAAAEANRNHQAAKTEEQAEYIRRTGHVPSSYLSFSCCNWCS*
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