Report for Sequence Feature Glyma.05g127500
Feature Type: gene_model
Chromosome: Gm05
Start: 32041345
stop: 32049554
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.05g127500
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT4G18160.1 AT
Ca2+ activated outward rectifying K+ channel 6
JGI N/A IEA
GO:0030322 GO-bp
stabilization of membrane potential
EnsemblGenomes N/A IEA
GO:0071805 GO-bp
potassium ion transmembrane transport
EnsemblGenomes N/A IEA
GO:0005887 GO-cc
integral component of plasma membrane
EnsemblGenomes N/A IEA
GO:0009705 GO-cc
plant-type vacuole membrane
EnsemblGenomes N/A IEA
GO:0016020 GO-cc
membrane
EnsemblGenomes N/A IEA
GO:0016021 GO-cc
integral component of membrane
EnsemblGenomes N/A IEA
GO:0022841 GO-mf
potassium ion leak channel activity
EnsemblGenomes N/A IEA
KOG1418
KOG
Tandem pore domain K+ channel
JGI N/A IEA
PTHR11003 Panther
POTASSIUM CHANNEL, SUBFAMILY K
JGI N/A IEA
PTHR11003:SF5 Panther
JGI N/A IEA
PF07885 PFAM
Ion channel
JGI N/A IEA
Expression Patterns of Glyma.05g127500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.05g127500
Paralog Evidence Comments
Glyma.08g082200 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.05g127500 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma05g25750 Wm82.a1.v1.1 IGC As supplied by JGI
Transcripts of Glyma.05g127500
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.05g127500.2 sequence-type=transcript locus=Glyma.05g127500 ID=Glyma.05g127500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTGAGTGTAGCATCTACCTCCGAATGAGTGGTACCCAAATCATAGTTAACATTGTCACCCCCCACGTCAACACCGTCCTCTTTCCTGTACCCATGTACTGCAAATCTCTCTCTCTTCTCTATCTGTTTTAACTTCCACCCCCACTTTGCTCTCTTAACACAAACCACTCTCTTCTGCATTTCCACAAACAATTTCCCTCCATTCCGAAACCGACCCATATCACCAAAACTGTTCTATCTTCCAAAGCCACCGCCTTTGCTTCCGTTAAATCTGTGTTTGGTTACCCTTATGGAAAAGGAGCCTCTGCTCCCATACTTCAGCCCCAGAAAGAAGCCTCAACTATGTCCCTTGCCAGAGCACGACGAAATCGTTCTTCCAATGACCCCTTCAGAATTCAAGGACCGTCTCATCTTTGGTCCTTCTCCTTCCTCTGCTTCCCCAAGGGACCCTTCACCTCTTGCTGATGCCTTAACACTTTCTCACAATTCCCCAAAATGTTCCTCTTCTAACTCACAGGACTATGCATCATCACCACTATTTGATTCCcaacaaaaacaacaacaacTCAACTCTTGGCTCCTTGACCCCAATTACGAGTCGTGGCGGAAAACGAACCTTCATCGGTCGAAAACCGCGCCGGCCATGGCCGTGATCAGCGATTTCAATCCCCACTCCACCGTGCAAAGACCCAAATTTGCCAGCCAGAGTATTGTGTGCCAGGGTGTTATTCTTCTTGCTCTTTATTTGGCATTAGGGGTTGTCATTTATTGGTTCAATCGTCATAATTTTACAGCTACTGAGACTCATCCTATAGTTGATGCATTGTATTTTTGTATAGTGACAATGTGCACAATAGGGTACGGTGATATCACTCCCAATAGTACAGCCACTAAGCTTTTCTCTATATTGTTTGTGTTGGTGGGGTTTGGATTTATAGACATATTGTTGAGTGGGATGGTTAGCTATGTGCTTGATTTGCAGGAGAATCATATGTTGACGGCAGTGAAGGGAAGGAGGGGTGAGAAGGATGGGAAGTCTTATATAATTGATGTGAAGAAAGGGAGGATGAGGATTCGGTTGAAGGTGGCGCTGGCGTTGGGGGTTGTGGTGATTTGTATTGGGGTAGGTGTGGGGGTTATGCATTTTGTGGAGAAGCTTGGATGGTTGGATTCGTTTTATCTTTTCGGTTATGTCTGTTACGACGGTTGGGTATGGAGACCACGCGTTCAAGACCATGCACGGTCGGATCTTTGCTGCGATTTGGTTGCTTGTGTCGACGCTTGCTGTGGCCCGGGCGTTCCTCTATTTGGCTGAGGCGAGAGTGGATAAGCGGCATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCAGCAGACATAGACAATAATGGCTTTGTGAGTAAATCGGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTATCTGAGAAGGACATCATGCAGGTTAGTGAGAAGTTTGATAGACTAGATGCTGGCAACTGCGGAAAAATAACGCTTGCTGATCTTATGGGGAATCATAATTGATGAGTTCAGTGTTGCCAATTTGAGAAGGGAGTGTCAGATTCTCAAGTTGATGGGAACTTTCTTCTTCTGGGGATTGGGAGGGATATCAGGTTGTCAAAGACGCAAGCTGGTGATTTTCCCCTTACCCTCTTGTCATGATCATTAACTCATGACATAAAGTTGATGCTGCTGAATTGCTGGGTTCTTGTGCCTGAATTTCACAAATTATTTGGAGGATGGTAAGGTGCAAGACACCTTGCTGAAATTCGGGTATGACCAATCACATATTGTCAGATTGATGAGATGGCTTGTGATAATGGAAGGGATAATTTTGATTGGTTAAATAATTAATCTGTACATATTCTTTTTGGAAAATGAATTGCATTGATTCTTTAGCATATTATTTCTAGTGAGCTTCCCTGGGTTAGCCGTATTACACAATCAATGTGTTCGTCTTGGTGACTTTCGTGTATTGTTTTTGCCAAGATGATTCGATTAGCTCAGGCGTAATTAAATATGTTTCTTATTTAAGTTCTTTCATAATTCAATTCTTTGTTGAGTAAAGATACTGCACTTGCTTATATTCACGTATATGCCATTGGACAATACTTCCAGTTGTAGA
Coding sequences of Glyma.05g127500
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.05g127500.1 sequence-type=CDS polypeptide=Glyma.05g127500.1.p locus=Glyma.05g127500 ID=Glyma.05g127500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAAAGGAGCCTCTGCTCCCATACTTCAGCCCCAGAAAGAAGCCTCAACTATGTCCCTTGCCAGAGCACGACGAAATCGTTCTTCCAATGACCCCTTCAGAATTCAAGGACCGTCTCATCTTTGGTCCTTCTCCTTCCTCTGCTTCCCCAAGGGACCCTTCACCTCTTGCTGATGCCTTAACACTTTCTCACAATTCCCCAAAATGTTCCTCTTCTAACTCACAGGACTATGCATCATCACCACTATTTGATTCCCAACAAAAACAACAACAACTCAACTCTTGGCTCCTTGACCCCAATTACGAGTCGTGGCGGAAAACGAACCTTCATCGGTCGAAAACCGCGCCGGCCATGGCCGTGATCAGCGATTTCAATCCCCACTCCACCGTGCAAAGACCCAAATTTGCCAGCCAGAGTATTGTGTGCCAGGGTGTTATTCTTCTTGCTCTTTATTTGGCATTAGGGGTTGTCATTTATTGGTTCAATCGTCATAATTTTACAGCTACTGAGACTCATCCTATAGTTGATGCATTGTATTTTTGTATAGTGACAATGTGCACAATAGGGTACGGTGATATCACTCCCAATAGTACAGCCACTAAGCTTTTCTCTATATTGTTTGTGTTGGTGGGGTTTGGATTTATAGACATATTGTTGAGTGGGATGGTTAGCTATGTGCTTGATTTGCAGGAGAATCATATGTTGACGGCAGTGAAGGGAAGGAGGGGTGAGAAGGATGGGAAGTCTTATATAATTGATGTGAAGAAAGGGAGGATGAGGATTCGGTTGAAGGTGGCGCTGGCGTTGGGGGTTGTGGTGATTTGTATTGGGGTAGGTGTGGGGGTTATGCATTTTGTGGAGAAGCTTGGATGGTTGGATTCGTTTTATCTTTTCGACCACGCGTTCAAGACCATGCACGGTCGGATCTTTGCTGCGATTTGGTTGCTTGTGTCGACGCTTGCTGTGGCCCGGGCGTTCCTCTATTTGGCTGAGGCGAGAGTGGATAAGCGGCATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCAGCAGACATAGACAATAATGGCTTTGTGAGTAAATCGGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTATCTGAGAAGGACATCATGCAGGTTAGTGAGAAGTTTGATAGACTAGATGCTGGCAACTGCGGAAAAATAACGCTTGCTGATCTTATGGGGAATCATAATTGA
>Glyma.05g127500.2 sequence-type=CDS polypeptide=Glyma.05g127500.2.p locus=Glyma.05g127500 ID=Glyma.05g127500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAAAAGGAGCCTCTGCTCCCATACTTCAGCCCCAGAAAGAAGCCTCAACTATGTCCCTTGCCAGAGCACGACGAAATCGTTCTTCCAATGACCCCTTCAGAATTCAAGGACCGTCTCATCTTTGGTCCTTCTCCTTCCTCTGCTTCCCCAAGGGACCCTTCACCTCTTGCTGATGCCTTAACACTTTCTCACAATTCCCCAAAATGTTCCTCTTCTAACTCACAGGACTATGCATCATCACCACTATTTGATTCCCAACAAAAACAACAACAACTCAACTCTTGGCTCCTTGACCCCAATTACGAGTCGTGGCGGAAAACGAACCTTCATCGGTCGAAAACCGCGCCGGCCATGGCCGTGATCAGCGATTTCAATCCCCACTCCACCGTGCAAAGACCCAAATTTGCCAGCCAGAGTATTGTGTGCCAGGGTGTTATTCTTCTTGCTCTTTATTTGGCATTAGGGGTTGTCATTTATTGGTTCAATCGTCATAATTTTACAGCTACTGAGACTCATCCTATAGTTGATGCATTGTATTTTTGTATAGTGACAATGTGCACAATAGGGTACGGTGATATCACTCCCAATAGTACAGCCACTAAGCTTTTCTCTATATTGTTTGTGTTGGTGGGGTTTGGATTTATAGACATATTGTTGAGTGGGATGGTTAGCTATGTGCTTGATTTGCAGGAGAATCATATGTTGACGGCAGTGAAGGGAAGGAGGGGTGAGAAGGATGGGAAGTCTTATATAATTGATGTGAAGAAAGGGAGGATGAGGATTCGGTTGAAGGTGGCGCTGGCGTTGGGGGTTGTGGTGATTTGTATTGGGGTAGGTGTGGGGGTTATGCATTTTGTGGAGAAGCTTGGATGGTTGGATTCGTTTTATCTTTTCGGTTATGTCTGTTACGACGGTTGGGTATGGAGACCACGCGTTCAAGACCATGCACGGTCGGATCTTTGCTGCGATTTGGTTGCTTGTGTCGACGCTTGCTGTGGCCCGGGCGTTCCTCTATTTGGCTGA
Predicted protein sequences of Glyma.05g127500
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.05g127500.1.p sequence-type=predicted peptide transcript=Glyma.05g127500.1 locus=Glyma.05g127500 ID=Glyma.05g127500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEKEPLLPYFSPRKKPQLCPLPEHDEIVLPMTPSEFKDRLIFGPSPSSASPRDPSPLADALTLSHNSPKCSSSNSQDYASSPLFDSQQKQQQLNSWLLDPNYESWRKTNLHRSKTAPAMAVISDFNPHSTVQRPKFASQSIVCQGVILLALYLALGVVIYWFNRHNFTATETHPIVDALYFCIVTMCTIGYGDITPNSTATKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHMLTAVKGRRGEKDGKSYIIDVKKGRMRIRLKVALALGVVVICIGVGVGVMHFVEKLGWLDSFYLFDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVSEKDIMQVSEKFDRLDAGNCGKITLADLMGNHN*
>Glyma.05g127500.2.p sequence-type=predicted peptide transcript=Glyma.05g127500.2 locus=Glyma.05g127500 ID=Glyma.05g127500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MEKEPLLPYFSPRKKPQLCPLPEHDEIVLPMTPSEFKDRLIFGPSPSSASPRDPSPLADALTLSHNSPKCSSSNSQDYASSPLFDSQQKQQQLNSWLLDPNYESWRKTNLHRSKTAPAMAVISDFNPHSTVQRPKFASQSIVCQGVILLALYLALGVVIYWFNRHNFTATETHPIVDALYFCIVTMCTIGYGDITPNSTATKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHMLTAVKGRRGEKDGKSYIIDVKKGRMRIRLKVALALGVVVICIGVGVGVMHFVEKLGWLDSFYLFGYVCYDGWVWRPRVQDHARSDLCCDLVACVDACCGPGVPLFG*