Report for Sequence Feature Glyma.05g126000
Feature Type: gene_model
Chromosome: Gm05
Start: 31942009
stop: 31945498
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.05g126000
Expression Patterns of Glyma.05g126000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.05g126000
Paralog Evidence Comments
Glyma.08g081000 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.05g126000 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma05g25600 Wm82.a1.v1.1 IGC As supplied by JGI
Transcripts of Glyma.05g126000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.05g126000.2 sequence-type=transcript locus=Glyma.05g126000 ID=Glyma.05g126000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TGGAAACCAAGGACGGAAAATCTGTAACGTTTTCTATTATAAGACAGGGTGTTAACGGCTAGAAGCCAAGGAATCAGTAACATAAAATGGAGGTTCAATTTGCCCTCCCATTtcactaacacacacatcacatcatatcaGAGACTCCATCTCCCTCTCGCACGCGACGAGGGAGTCCCGCTTCGGAATCTCACCCCCTCTTTCTGCGAATTCGCAAGATGGTTGCTCAGAAATTCGTTGTCGACTTGAACAAGCCCCTTGTATTCCAGGTTGGGCATCTTGGGGAAGCCTACGATGATTGGGTTCACGATCCTATCGTAAGCAAAGAAGGTCCTCGGTTTTTCCAAAGCGGTTTCCTCGAGTTGTTCACACGCACTGCATGGTGGGTGATTCCAACCGTTTGGGTGCCGGTTGCGAGTTGGTTCATTTCCAACTCTGTCAAATCAGGCCTCCCTTCTCTTGATGTAGCTCTGCTCGTCTTTCTCGGCATCTTTGTTTGGACTTTGGCTGAATACACCTTGCACCGTTTCCTCTTCCATGTTAAAACCAAGAGCTACTGGGGAAATACCTTGCATTATCTTCTCCATGGCTGCCACCACAAGCACCCCATGGATAGCTATAGACTTGTTTTCCCCCCTGTAGCAGCAGCTATATTAGCCCTCCCGACATTAATGAGAAGATTAATGGTTGATATTGTATGCACAACAAATTGCAAATGCATTGGAAATTGGAATACTATCAGTTTATTCTTTTCATTAACAACTAAGATTACTCATGTTAGAAGAGATCTGGAACTTGGTGAAGCTGATATGCACCCCTTCAGTTGCTCCTGCGGTGTTTGGAGGTATTTTGTTGGGCTATGTGATGTATGATTGCACCCATTACTACTTACACCATGGTCAACCAAAGTCTGATGTGCCCAAAAGTCTCAAGAAATATCACTTGAATCATCATTATCGGCTCCAGAACTATGGCTTTGGGATCACATCACCACTGTGGGATAAAGTTTTTGGAACGGTTCCTCCTCCTCAATCAAAGGGGGATGCCAAACGTAGATAAGTTACTGTCAAGGTTGCATTTGTTCATTGGTTAAGCATAGTTCATTCAGGAGCTTCAAACGAGATATGTTGATAATTCATTATTCATGTCTTGATTGTCTAATTATTTTGCTCCCCAATTGATGTTTCTGAGGGTTAACGTGCCACCATCTTGTGTCAAACATCCTGTAAAATTTCATACATTTATCAAATTTATAGTATAAAACTTGCCTCCCTGTGCACAGTTCTTTTATTTATGTTGTAACTTGGCTTTCCGC
>Glyma.05g126000.3 sequence-type=transcript locus=Glyma.05g126000 ID=Glyma.05g126000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTTTTCGTACCCTCCTTTTCCCTCCATTTTCCAGATCTGCTTCACTTTTTCACATTTCCCGATCCTAATTTTTTTTTTTTTTGTTCCTTCAGTCGCAAGATGGTTGCTCAGAAATTCGTTGTCGACTTGAACAAGCCCCTTGTATTCCAGGTTGGGCATCTTGGGGAAGCCTACGATGATTGGGTTCACGATCCTATCGTAAGCAAAGAAGGTCCTCGGTTTTTCCAAAGCGGTTTCCTCGAGTTGTTCACACGCACTGCATGGTGGGTGATTCCAACCGTTTGGGTGCCGGTTGCGAGTTGGTTCATTTCCAACTCTGTCAAATCAGGCCTCCCTTCTCTTGATGTAGCTCTGCTCGTCTTTCTCGGCATCTTTGTTTGGACTTTGGCTGAATACACCTTGCACCGTTTCCTCTTCCATGTTAAAACCAAGAGCTACTGGGGAAATACCTTGCATTATCTTCTCCATGGCTGCCACCACAAGCACCCCATGGATAGCTATAGACTTGTTTTCCCCCCTGTAGCAGCAGCTATATTAGCCCTCCCGATCTGGAACTTGGTGAAGCTGATATGCACCCCTTCAGTTGCTCCTGCGGTGTTTGGAGGTATTTTGTTGGGCTATGTGATGTATGATTGCACCCATTACTACTTACACCATGGTCAACCAAAGTCTGATGTGCCCAAAAGTCTCAAGAAATATCACTTGAATCATCATTATCGGCTCCAGAACTATGGCTTTGGGATCACATCACCACTGTGGGATAAAGTTTTTGGAACGGTTCCTCCTCCTCAATCAAAGGGGGATGCCAAACGTAGATAAGTTACTGTCAAGGTTGCATTTGTTCATTGGTTAAGCATAGTTCATTCAGGAGCTTCAAACGAGATATGTTGATAATTCATTATTCATGTCTTGATTGTCTAATTATTTTGCTCCCCAATTGATGTTTCTGAGGGTTAACGTGCCACCATCTTGTGTCAAACATCCTGTAAAATTTCATACATTTATCAAATTTATAGTATAAAACTTGCCTCCCTGTGCACAGTTCTTTTATTTATGTTGTAACTTGGCTTTCCGC
>Glyma.05g126000.4 sequence-type=transcript locus=Glyma.05g126000 ID=Glyma.05g126000.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
TGGAAACCAAGGACGGAAAATCTGTAACGTTTTCTATTATAAGACAGGGTGTTAACGGCTAGAAGCCAAGGAATCAGTAACATAAAATGGAGGTTCAATTTGCCCTCCCATTtcactaacacacacatcacatcatatcaGAGACTCCATCTCCCTCTCGCACGCGACGAGGGAGTCCCGCTTCGGAATCTCACCCCCTCTTTCTGCGAATTCGCAAGATGGTTGCTCAGAAATTCGTTGTCGACTTGAACAAGCCCCTTGTATTCCAGGTTGGGCATCTTGGGGAAGCCTACGATGATTGGGTTCACGATCCTATCGTAAGCAAAGAAGGTCCTCGGTTTTTCCAAAGCGGTTTCCTCGAGTTGTTCACACGCACTGCATGGTGGGTGATTCCAACCGTTTGGGTGCCGGTTGCGAGTTGGTTCATTTCCAACTCTGTCAAATCAGGCCTCCCTTCTCTTGATGTAGCTCTGCTCGTCTTTCTCGGCATCTTTGTTTGGACTTTGGCTGAATACACCTTGCACCGTTTCCTCTTCCATGTTAAAACCAAGAGCTACTGGGGAAATACCTTGCATTATCTTCTCCATGGCTGCCACCACAAGCACCCCATGGATAGCTATAGACTTGTTTTCCCCCCTGTAGCAGCAGCTATATTAGCCCTCCCGACATTAATGAGAAGATTAATGGTTGATATTGTATGCACAACAAATTGCAAATGCATTGGAAATTGGAATACTATCAGTTTATTCTTTTCATTAACAACTAAGATTACTCATGTTAGAAGAGGTAAATCCTATTATCTGGATAAAATTATTGTTAATGAGTAACTCTATTTTGGTTCATATAAAAAGTCACCAATTTAGTTCGTCATAGCT
Coding sequences of Glyma.05g126000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.05g126000.1 sequence-type=CDS polypeptide=Glyma.05g126000.1.p locus=Glyma.05g126000 ID=Glyma.05g126000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTGCTCAGAAATTCGTTGTCGACTTGAACAAGCCCCTTGTATTCCAGGTTGGGCATCTTGGGGAAGCCTACGATGATTGGGTTCACGATCCTATCGTAAGCAAAGAAGGTCCTCGGTTTTTCCAAAGCGGTTTCCTCGAGTTGTTCACACGCACTGCATGGTGGGTGATTCCAACCGTTTGGGTGCCGGTTGCGAGTTGGTTCATTTCCAACTCTGTCAAATCAGGCCTCCCTTCTCTTGATGTAGCTCTGCTCGTCTTTCTCGGCATCTTTGTTTGGACTTTGGCTGAATACACCTTGCACCGTTTCCTCTTCCATGTTAAAACCAAGAGCTACTGGGGAAATACCTTGCATTATCTTCTCCATGGCTGCCACCACAAGCACCCCATGGATAGCTATAGACTTGTTTTCCCCCCTGTAGCAGCAGCTATATTAGCCCTCCCGATCTGGAACTTGGTGAAGCTGATATGCACCCCTTCAGTTGCTCCTGCGGTGTTTGGAGGTATTTTGTTGGGCTATGTGATGTATGATTGCACCCATTACTACTTACACCATGGTCAACCAAAGTCTGATGTGCCCAAAAGTCTCAAGAAATATCACTTGAATCATCATTATCGGCTCCAGAACTATGGCTTTGGGATCACATCACCACTGTGGGATAAAGTTTTTGGAACGGTTCCTCCTCCTCAATCAAAGGGGGATGCCAAACGTAGATAA
>Glyma.05g126000.2 sequence-type=CDS polypeptide=Glyma.05g126000.2.p locus=Glyma.05g126000 ID=Glyma.05g126000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTGCTCAGAAATTCGTTGTCGACTTGAACAAGCCCCTTGTATTCCAGGTTGGGCATCTTGGGGAAGCCTACGATGATTGGGTTCACGATCCTATCGTAAGCAAAGAAGGTCCTCGGTTTTTCCAAAGCGGTTTCCTCGAGTTGTTCACACGCACTGCATGGTGGGTGATTCCAACCGTTTGGGTGCCGGTTGCGAGTTGGTTCATTTCCAACTCTGTCAAATCAGGCCTCCCTTCTCTTGATGTAGCTCTGCTCGTCTTTCTCGGCATCTTTGTTTGGACTTTGGCTGAATACACCTTGCACCGTTTCCTCTTCCATGTTAAAACCAAGAGCTACTGGGGAAATACCTTGCATTATCTTCTCCATGGCTGCCACCACAAGCACCCCATGGATAGCTATAGACTTGTTTTCCCCCCTGTAGCAGCAGCTATATTAGCCCTCCCGACATTAATGAGAAGATTAATGGTTGATATTGTATGCACAACAAATTGCAAATGCATTGGAAATTGGAATACTATCAGTTTATTCTTTTCATTAACAACTAAGATTACTCATGTTAGAAGAGATCTGGAACTTGGTGAAGCTGATATGCACCCCTTCAGTTGCTCCTGCGGTGTTTGGAGGTATTTTGTTGGGCTATGTGATGTATGA
>Glyma.05g126000.3 sequence-type=CDS polypeptide=Glyma.05g126000.3.p locus=Glyma.05g126000 ID=Glyma.05g126000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTGCTCAGAAATTCGTTGTCGACTTGAACAAGCCCCTTGTATTCCAGGTTGGGCATCTTGGGGAAGCCTACGATGATTGGGTTCACGATCCTATCGTAAGCAAAGAAGGTCCTCGGTTTTTCCAAAGCGGTTTCCTCGAGTTGTTCACACGCACTGCATGGTGGGTGATTCCAACCGTTTGGGTGCCGGTTGCGAGTTGGTTCATTTCCAACTCTGTCAAATCAGGCCTCCCTTCTCTTGATGTAGCTCTGCTCGTCTTTCTCGGCATCTTTGTTTGGACTTTGGCTGAATACACCTTGCACCGTTTCCTCTTCCATGTTAAAACCAAGAGCTACTGGGGAAATACCTTGCATTATCTTCTCCATGGCTGCCACCACAAGCACCCCATGGATAGCTATAGACTTGTTTTCCCCCCTGTAGCAGCAGCTATATTAGCCCTCCCGATCTGGAACTTGGTGAAGCTGATATGCACCCCTTCAGTTGCTCCTGCGGTGTTTGGAGGTATTTTGTTGGGCTATGTGATGTATGATTGCACCCATTACTACTTACACCATGGTCAACCAAAGTCTGATGTGCCCAAAAGTCTCAAGAAATATCACTTGAATCATCATTATCGGCTCCAGAACTATGGCTTTGGGATCACATCACCACTGTGGGATAAAGTTTTTGGAACGGTTCCTCCTCCTCAATCAAAGGGGGATGCCAAACGTAGATAA
>Glyma.05g126000.4 sequence-type=CDS polypeptide=Glyma.05g126000.4.p locus=Glyma.05g126000 ID=Glyma.05g126000.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTTGCTCAGAAATTCGTTGTCGACTTGAACAAGCCCCTTGTATTCCAGGTTGGGCATCTTGGGGAAGCCTACGATGATTGGGTTCACGATCCTATCGTAAGCAAAGAAGGTCCTCGGTTTTTCCAAAGCGGTTTCCTCGAGTTGTTCACACGCACTGCATGGTGGGTGATTCCAACCGTTTGGGTGCCGGTTGCGAGTTGGTTCATTTCCAACTCTGTCAAATCAGGCCTCCCTTCTCTTGATGTAGCTCTGCTCGTCTTTCTCGGCATCTTTGTTTGGACTTTGGCTGAATACACCTTGCACCGTTTCCTCTTCCATGTTAAAACCAAGAGCTACTGGGGAAATACCTTGCATTATCTTCTCCATGGCTGCCACCACAAGCACCCCATGGATAGCTATAGACTTGTTTTCCCCCCTGTAGCAGCAGCTATATTAGCCCTCCCGACATTAATGAGAAGATTAATGGTTGATATTGTATGCACAACAAATTGCAAATGCATTGGAAATTGGAATACTATCAGTTTATTCTTTTCATTAACAACTAAGATTACTCATGTTAGAAGAGGTAAATCCTATTATCTGGATAAAATTATTGTTAATGAGTAA
Predicted protein sequences of Glyma.05g126000
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.05g126000.1.p sequence-type=predicted peptide transcript=Glyma.05g126000.1 locus=Glyma.05g126000 ID=Glyma.05g126000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVAQKFVVDLNKPLVFQVGHLGEAYDDWVHDPIVSKEGPRFFQSGFLELFTRTAWWVIPTVWVPVASWFISNSVKSGLPSLDVALLVFLGIFVWTLAEYTLHRFLFHVKTKSYWGNTLHYLLHGCHHKHPMDSYRLVFPPVAAAILALPIWNLVKLICTPSVAPAVFGGILLGYVMYDCTHYYLHHGQPKSDVPKSLKKYHLNHHYRLQNYGFGITSPLWDKVFGTVPPPQSKGDAKRR*
>Glyma.05g126000.2.p sequence-type=predicted peptide transcript=Glyma.05g126000.2 locus=Glyma.05g126000 ID=Glyma.05g126000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVAQKFVVDLNKPLVFQVGHLGEAYDDWVHDPIVSKEGPRFFQSGFLELFTRTAWWVIPTVWVPVASWFISNSVKSGLPSLDVALLVFLGIFVWTLAEYTLHRFLFHVKTKSYWGNTLHYLLHGCHHKHPMDSYRLVFPPVAAAILALPTLMRRLMVDIVCTTNCKCIGNWNTISLFFSLTTKITHVRRDLELGEADMHPFSCSCGVWRYFVGLCDV*
>Glyma.05g126000.3.p sequence-type=predicted peptide transcript=Glyma.05g126000.3 locus=Glyma.05g126000 ID=Glyma.05g126000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVAQKFVVDLNKPLVFQVGHLGEAYDDWVHDPIVSKEGPRFFQSGFLELFTRTAWWVIPTVWVPVASWFISNSVKSGLPSLDVALLVFLGIFVWTLAEYTLHRFLFHVKTKSYWGNTLHYLLHGCHHKHPMDSYRLVFPPVAAAILALPIWNLVKLICTPSVAPAVFGGILLGYVMYDCTHYYLHHGQPKSDVPKSLKKYHLNHHYRLQNYGFGITSPLWDKVFGTVPPPQSKGDAKRR*
>Glyma.05g126000.4.p sequence-type=predicted peptide transcript=Glyma.05g126000.4 locus=Glyma.05g126000 ID=Glyma.05g126000.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVAQKFVVDLNKPLVFQVGHLGEAYDDWVHDPIVSKEGPRFFQSGFLELFTRTAWWVIPTVWVPVASWFISNSVKSGLPSLDVALLVFLGIFVWTLAEYTLHRFLFHVKTKSYWGNTLHYLLHGCHHKHPMDSYRLVFPPVAAAILALPTLMRRLMVDIVCTTNCKCIGNWNTISLFFSLTTKITHVRRGKSYYLDKIIVNE*