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Report for Sequence Feature Glyma.05g125000

Feature Type:gene_model
Chromosome:Gm05
Start:31880142
stop:31881971
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g125000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G44440.1AT JGI N/AIEA
1.3.3.8EC tetrahydroberberine oxidase JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0016491GO-mf oxidoreductase activity JGI N/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding JGI N/AIEA
PTHR32448PantherFam OS08G0158400 PROTEIN JGI N/AIEA
PF01565Pfam FAD binding domain JGI N/AIEA
PF08031Pfam Berberine and berberine like JGI N/AIEA

Gene model name correspondences to Glyma.05g125000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g25470 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g125000
>Glyma.05g125000.1 sequence-type=CDS polypeptide=Glyma.05g125000.1.p locus=Glyma.05g125000 id=Glyma.05g125000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGCATCTAAGCTTATATTTTACAGTTGTTGCCATAGCGCTCCTATTTTCATTTACATCTTCTTCAGCAGATACTCATGAAAACTTTGTTCAATGTCTTTATAATTATCCCAATAGCGGAACCTCAATCTCCAAAGTTGTTTACACCCAGACCAACTCCTCATACACGTCTACACTAGATTCTTCCATTCAAATTTCTAGGTTCTTAAACGCAAGCTCAAAACCCCTTGTCATTGTGACACCTTTGGTCATTTCCCACGTTCAAGTCACCATAATATGTTCCCAACACCATGGCATGCAGATTAGAACCCGAAGTGGAGGCCACGATTACGAGGGTCTCTCGTACATTGCCAAGGATCCATTTGTCGTCCTTGACCTCAAAAACCTTCGAGAAATTAAAGTTGACGTAGAAAAAAGCAATGCATGGGTTCAAGCTGGTTCAACTATTGGTGAACTTTACTACAGCATTAGCCAGAAAAGCAAAACACTAGGGTTCCCAGCAGGTGTGTGCCCCACTGTTGGCACTGGTGGCCACTTCAGTGGTGGTGGATATGGATTCTTGATGCGTAAGTACGGTCTTGCTGCTGATAATGTAATTGATGCTCACATAGTTGATGTGAAGGGTAATCTTCTTGACAGAAAAGCCATGGGTGAGGATCTGTTTTGGGCCATTAGAGGAGGTGGGGGAGCAAGCTTTGGAGTCATTGTGGCTTGGAAAATAAAACTAGTTCCAGTTCCATCAAAAGTGACAGTGTTCAGAATTGCAAGGACATTGGAACAAAATGCAACTGAGATTATTCGTAAGTGGCAGCTTGTGGCAAATAAATTTGACCAGCGCCTAATCATTAGGGTTGCGATGACAAGGGTAAATTCAAGTCAACGTGGGAAGCTAACAATACAAGCCAGATTTGAGTCCATGTTTCTTGGACGTGTAGACCAGCTTATTCCCTTGATGCAAAAGAGATTCCCAGAGTTAGGTTTGGTAAAAGAAGATTGTACTGAGATGAGTTGGATAAACTCAATTCTCTTCATGAAAGCTGGGTTAGTTGGATCCGCAAGCAATGAAACCCTTGAAGTTTTGCTGAACAGAACTCAAGCTGTTTTTTTGACATTCAAAGGAAAATCTGATTATGTGAGAAAACCCATTTCTGTTGTTGGGTTACGAGGCTTATGGCGCTTGTTTTATGAAGATGAGGCCCGAGATGCTTCGGTTGAATTCGCTCCTTATGGAGGCAGAATGGATGAGATTTCGGAATCTGAAATTCCATTCCCACACAGATCTGGAAACATGTTCCATATTCACTACGCGGTCTATTGGCAAGAGGAAGGGGATGAGGCAGCACAAAGGTACATCAACTGGCTTAGAAGATTGTACAAATATATGGAACCTTATGTTTCAAAGTCTCCTAGAGCAGCATATCTGAATTATAGAGACCTTGACATTGGGGTAAATAATAACTATGACTACACAAGCTATAGGCAAGCCAGTATTTGGGGTCTTAAGTATTTCAACAATAACTTTAAGAGATTGGCAAAAGTGAAGGTCAAGGTTGATCCTCAAAACTTCTTCAGAAACGAGCAAAGCATCCCACTTCTCGAGTCTGAGTGA
Predicted protein sequences of Glyma.05g125000
>Glyma.05g125000.1.p sequence-type=predicted peptide transcript=Glyma.05g125000.1 locus=Glyma.05g125000 id=Glyma.05g125000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMHLSLYFTVVAIALLFSFTSSSADTHENFVQCLYNYPNSGTSISKVVYTQTNSSYTSTLDSSIQISRFLNASSKPLVIVTPLVISHVQVTIICSQHHGMQIRTRSGGHDYEGLSYIAKDPFVVLDLKNLREIKVDVEKSNAWVQAGSTIGELYYSISQKSKTLGFPAGVCPTVGTGGHFSGGGYGFLMRKYGLAADNVIDAHIVDVKGNLLDRKAMGEDLFWAIRGGGGASFGVIVAWKIKLVPVPSKVTVFRIARTLEQNATEIIRKWQLVANKFDQRLIIRVAMTRVNSSQRGKLTIQARFESMFLGRVDQLIPLMQKRFPELGLVKEDCTEMSWINSILFMKAGLVGSASNETLEVLLNRTQAVFLTFKGKSDYVRKPISVVGLRGLWRLFYEDEARDASVEFAPYGGRMDEISESEIPFPHRSGNMFHIHYAVYWQEEGDEAAQRYINWLRRLYKYMEPYVSKSPRAAYLNYRDLDIGVNNNYDYTSYRQASIWGLKYFNNNFKRLAKVKVKVDPQNFFRNEQSIPLLESE*






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