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Report for Sequence Feature Glyma.05g124000

Feature Type:gene_model
Chromosome:Gm05
Start:31804256
stop:31805807
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g124000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G06860.1AT ATPGIP1,PGIP1 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR27000PantherFam LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED JGI N/AIEA
PF00560Pfam Leucine Rich Repeat JGI N/AIEA
PF08263Pfam Leucine rich repeat N-terminal domain JGI N/AIEA
PF13855Pfam Leucine rich repeat JGI N/AIEA

Proteins Associated with Glyma.05g124000
LocusGene SymbolProtein Name
PGIP1 polygalacturonase inhibitor 1 gene
PGIP2 polygalacturonase inhibitor 2 gene

Gene model name correspondences to Glyma.05g124000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g25370 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g124000
>Glyma.05g124000.2 sequence-type=CDS polypeptide=Glyma.05g124000.2.p locus=Glyma.05g124000 id=Glyma.05g124000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACCTTTTTGACCGCTTACGTAGTGCGAATTAACTCGAAGGAGACATTCGTGATGCCAACACACCCATATATATACGTCCAATTTTCAGAGACAAATCATACTGAATTAATCAAAATCCCTTCAAAGATGTCTCTCTTAAGCATTCTTCTACTCATAGTCATGTCCTTCTCTCTCGCACTCTCAGAACTATGCAACCCACAAGACAAACAAACGCTACTCCAAATCAAGAAAGAGCTTGGCAACCCAACCACTCTTTCCTCATGGCACCCAAAGACCGACTGTTGCAACAACAGCTGGGTAGGTGTCTCATGCGACACCGTCACCCCAACATACCGCGTCGACAACCTCGACCTCTCCGAACTTAACCTCCGCAAACCCTACCCTATTCCCCCCTCCGTAGGTAGCCTTCCCTGCCTCAAATTTCTTTACATCACCAACAACCCCAACATCGTTGGCACAATACCCACCACCATCACCAAACTCACCAAGCTTCGTGAGCTCAACATCAGATACACCAATATCTCCGGCCAGATACCCCATTTCTTGTCCCAAATCAAAGCCCTCGGATTCCTCGACCTCTCCAACAACAAACTCTCCGGCAACCTCCCTTCCTGGCTTCCTTCTCTCCCCGACCTTTACGGAATCTCCTTCGACAACAACTACATCTCCGGCCCCATCCCAGACTTGTTCGCTTCCGTCTCGGAGAGGTTCGGGTTTATCTCACTCTCCGGCAACCGCCTCATCGGGAAGATTCCGGCGTCGCTGGGGAAGCCGGACATGAAGATTGTGGACTTGTCCCGGAACATGCTGGAGGGTGATGCGTCGGTGTTGTTTGGGTCGGAGAAACACACAGAGAGGATATATCTGGCAAACAACTTGTTTGCTTTTGATTTGGGAAAAGTAAGGTTGTCGAAGACCTTGGGGTTGTTGGATGTTGGCCATAATCTTATATATGGGACGCTTCCTAAGGGACTTACGTCGCTTAAGGATCTGTATTATTTGGATGTGAGCTACAATAATCTCTGTGGTGAGATTCCACGGGGTGGTAAATTGCAAGAATTTGATGCGTCTTTGTATGCTAATAACAAGTGCTTGTGTGGCTCCCCTCTTCCTAGCTGCAAACGGTTCTAG

>Glyma.05g124000.3 sequence-type=CDS polypeptide=Glyma.05g124000.3.p locus=Glyma.05g124000 id=Glyma.05g124000.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCAACCCACAAGACAAACAAACGCTACTCCAAATCAAGAAAGAGCTTGGCAACCCAACCACTCTTTCCTCATGGCACCCAAAGACCGACTGTTGCAACAACAGCTGGGTAGGTGTCTCATGCGACACCGTCACCCCAACATCGTTGGCACAATACCCACCACCATCACCAAACTCACCAAGCTTCGTGAGCTCAACATCAGATACACCAATATCTCCGGCCAGATACCCCATTTCTTGTCCCAAATCAAAGCCCTCGGATTCCTCGACCTCTCCAACAACAAACTCTCCGGCAACCTCCCTTCCTGGCTTCCTTCTCTCCCCGACCTTTACGGAATCTCCTTCGACAACAACTACATCTCCGGCCCCATCCCAGACTTGTTCGCTTCCGTCTCGGAGAGGTTCGGGTTTATCTCACTCTCCGGCAACCGCCTCATCGGGAAGATTCCGGCGTCGCTGGGGAAGCCGGACATGAAGATTGTGGACTTGTCCCGGAACATGCTGGAGGGTGATGCGTCGGTGTTGTTTGGGTCGGAGAAACACACAGAGAGGATATATCTGGCAAACAACTTGTTTGCTTTTGATTTGGGAAAAGTAAGGTTGTCGAAGACCTTGGGGTTGTTGGATGTTGGCCATAATCTTATATATGGGACGCTTCCTAAGGGACTTACGTCGCTTAAGGATCTGTATTATTTGGATGTGAGCTACAATAATCTCTGTGGTGAGATTCCACGGGGTGGTAAATTGCAAGAATTTGATGCGTCTTTGTATGCTAATAACAAGTGCTTGTGTGGCTCCCCTCTTCCTAGCTGCAAACGGTTCTAG
Predicted protein sequences of Glyma.05g124000
>Glyma.05g124000.2.p sequence-type=predicted peptide transcript=Glyma.05g124000.2 locus=Glyma.05g124000 id=Glyma.05g124000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTFLTAYVVRINSKETFVMPTHPYIYVQFSETNHTELIKIPSKMSLLSILLLIVMSFSLALSELCNPQDKQTLLQIKKELGNPTTLSSWHPKTDCCNNSWVGVSCDTVTPTYRVDNLDLSELNLRKPYPIPPSVGSLPCLKFLYITNNPNIVGTIPTTITKLTKLRELNIRYTNISGQIPHFLSQIKALGFLDLSNNKLSGNLPSWLPSLPDLYGISFDNNYISGPIPDLFASVSERFGFISLSGNRLIGKIPASLGKPDMKIVDLSRNMLEGDASVLFGSEKHTERIYLANNLFAFDLGKVRLSKTLGLLDVGHNLIYGTLPKGLTSLKDLYYLDVSYNNLCGEIPRGGKLQEFDASLYANNKCLCGSPLPSCKRF*

>Glyma.05g124000.3.p sequence-type=predicted peptide transcript=Glyma.05g124000.3 locus=Glyma.05g124000 id=Glyma.05g124000.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MQPTRQTNATPNQERAWQPNHSFLMAPKDRLLQQQLGRCLMRHRHPNIVGTIPTTITKLTKLRELNIRYTNISGQIPHFLSQIKALGFLDLSNNKLSGNLPSWLPSLPDLYGISFDNNYISGPIPDLFASVSERFGFISLSGNRLIGKIPASLGKPDMKIVDLSRNMLEGDASVLFGSEKHTERIYLANNLFAFDLGKVRLSKTLGLLDVGHNLIYGTLPKGLTSLKDLYYLDVSYNNLCGEIPRGGKLQEFDASLYANNKCLCGSPLPSCKRF*






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