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Report for Sequence Feature Glyma.05g121100

Feature Type:gene_model
Chromosome:Gm05
Start:31438354
stop:31441321
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g121100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G26420.1AT ATRZ-1A JGI N/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0008270GO-mf zinc ion binding JGI N/AIEA
K12885KEGG Spliceosome JGI N/AIEA
KOG0107 KOG Alternative splicing factor SRp20/9G8 (RRM superfamily) JGI N/AIEA
PTHR24012PantherFam RNA BINDING PROTEIN JGI N/AIEA
PF00076Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) JGI N/AIEA
PF00098Pfam Zinc knuckle JGI N/AIEA

Gene model name correspondences to Glyma.05g121100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g24960 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g121100
>Glyma.05g121100.1 sequence-type=CDS polypeptide=Glyma.05g121100.1.p locus=Glyma.05g121100 id=Glyma.05g121100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCTGACGTGGAAGAGTTTCGTTGCTTCATTGGTGGCCTTGCATGGTCAACGTCTGATAGAAAGTTAAAGGATACATTTGAAAAGTTTGGCAAGCTTATTGAGGCAAAGGTGGTTGTTGACAAGTTCTCTGGGCGTTCTCGTGGTTTTGGATTTGTCACATTTGATGACAAGAAAGCAATGGACGAGGCTATTGATGCTATGAATGGGATAGATTTAGACGGGCGAACTATTACTGTTGATAGAGCTCAGCCTCAACAAGGATCAACTAGAGATGATGGTGATCGTTACCGGGAGCGTGGTCGTGATCGTGATCGTAACCGAGATTATGGAGGTGGAGGTGGTCGAGGATCTAATGGTGGTGAATGCTTTAAGTGTGGAAAACCTGGTCATTTTGCTAGGGAATGCCCTGGTGAAGGGTCCAGGGGAGGAAGGTATGGTGGTAGGGAAAGTAGATATGGTGGAAGCAGTGGTGGTGGTTATGGACCGGATAGAAATGCAGATCGTTCTTCAGGGGGGCGCAGCAGGGATGGTGGTAGTCATGGGGATTCTGGAAGTGATCGATATTATCGTGATCGTTCAGGACCATATGAGCGGGAGCGACGGGGATCGGGAGGCTTTCGTTGA
Predicted protein sequences of Glyma.05g121100
>Glyma.05g121100.1.p sequence-type=predicted peptide transcript=Glyma.05g121100.1 locus=Glyma.05g121100 id=Glyma.05g121100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSDVEEFRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDEAIDAMNGIDLDGRTITVDRAQPQQGSTRDDGDRYRERGRDRDRNRDYGGGGGRGSNGGECFKCGKPGHFARECPGEGSRGGRYGGRESRYGGSSGGGYGPDRNADRSSGGRSRDGGSHGDSGSDRYYRDRSGPYERERRGSGGFR*






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