SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g118200

Feature Type:gene_model
Chromosome:Gm05
Start:31144921
stop:31149960
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g118200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G78160.1AT APUM7,PUM7 JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
KOG2049 KOG Translational repressor MPT5/PUF4 and related RNA-binding proteins (Puf superfamily) JGI N/AIEA
PTHR12537PantherFam RNA BINDING PROTEIN PUMILIO-RELATED JGI N/AIEA
PF00806Pfam Pumilio-family RNA binding repeat JGI N/AIEA

Gene model name correspondences to Glyma.05g118200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g24580 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g118200
>Glyma.05g118200.1 sequence-type=CDS polypeptide=Glyma.05g118200.1.p locus=Glyma.05g118200 id=Glyma.05g118200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGGAAAGAGATATTGGAGAACGTGAAGGATGATGGGGGGCTCGAGGAGCTTGAGATGTTGCTGAATGAGATCCCTCAGGCAACATCACACAATCTTTACCATGGGAAATCGCATGATGTTGTTGTTCATCATGGTGATGATGATGATCATCGTCATGGTTCTTTTGTTGTGTCTCATGGAATGTGTGATGATGACCACCCATTCACTCAGGTTCAGTATCCATGTGTTTCATCCCCTGTGAGTGGCTTTTCTCTGCAATCTGATGGTTCTTCCTCAAGCTTGTTCTCTTCTTCTGGCCATGCCTTGTCTGACACTGGATCACCAACCCCTCCTCCATTGGAGGATCTTAAATCCACCACCATGCCTTCTTCTGGAGGTTCTTCTTCTCACCCTAATAACCGTTTCATCACACCTGATTCAACTCTTATCAGGAATGCCAATGGAGGTTTGGTTAATGAACTTGGCGGCCTGTGTGCCAATTTTAGCCAAATGTACATCAGCAATCAACAAGAGAGCCCTTGTGATTTCAAGGATGCTTCAATGGCCATGCATAGGCCTCCATTTCCTGAATGTGTATCCTTCACTGGAAATGGTCCAAGCAATGTTCACAAGCATGGGGATTCTTACAGTTTCAGGAGAGGTTCTTTTGATTGTGTTGGGGTTCAGTCCCCTCTTCCCTGGAGTCCTAGAAATCAGGATACCGATATGAATTCGGCCTTAATGGCTAATTTATTTGGATCAAGACAGTGTGCCAAAAGGTCCGAGCCAATGCTTTCTCAATTAAATGACTTTAGTGGTTCAATGGAGTCTCCATGTCATCATCATTCAAGGCAGCTGATGGATAACTACTATTTTGGAAGAAGTCGAAATCAGCCACCGGAGTGTACTGCTTCTTTGAGCAGGAATCCAATGGTTGATGCTTTACTTTATGCACAGAAAAATGGAATGAATGTAACTGAAGAAAGAGGCATGTTGAGATTGCCCAGCTCTTCCCGAGGTATTAATTTAAGACCTTATTTGGGTGTTCAGGATTTACTGCAGTATAGGCATAGCCATTCTCTGCCTAATAGTTCAAGAGCTGTGCCTCTTTCAAATGCTAGAATCCCACAAAGAAACATAGATGCTATTGCAAGTGAGGGGAGCTTCATCATACAAGGTGAAGGTGTAAATTATGTTGCTAGCAGAGGTTTGGATCGTTCTATGTATCATAGTAAGGCTGCGGTGCAAGACACCGGCTTTGCTAGGAATTTGAAGAGATCAGAGCTAGACATGCCATACCAGGTTGTAGGAACTTATGACAATACTAGGGGTGCCAGGATAGGTTGCTCCTTTCCTTTGTTACCCAAGTACAGTTCCCTAGCTGAAGCTCAAGGTTATATATATTTAATGGCCAAAGATCAGCATGGCTGTAGGTTCTTGCAGAAAATGTTTGATGAGGGTACACCAGAAGATGTTCTAATGATATTTAATGAGATAATTGATCATGTAGTGGAACTTATGATGAATCCTTTTGGAAATTACCTTATGCAGAAGTTATTGGATGTATGCAATGAAGAACAGAGGATGCAAATCCTATTAATAATTACCGAAGAACCTGGGCAGCTTGTCAGAATCTCTTTAAACACTCATGGCACTCGCGTGGTGCAGAAGCTAGTTGAGACTCTCAAAACTAGGCAGCAAATTTCATTAGCTGTTTCAGCTCTTGAACCAGGATTCTTGGCTCTCATCAAAGATCTAAATGGAAACCATGTGGTTCAGCGTTGTTTGCTATGTTTAAGCAATGAAGATAACAAGTTTATATTTGTTGCTGCTGCAAAGTATTGTGTTGACATTGCAACTCACCAACACGGATGCTGTGTTCTGCAAAGATGCATTGGCCATTCAAGCGGGGAGTATCGAGAAAAACTGATTGCAGAAATATGTGCTAATGCACTTCTGCTAGCTCAAGATCAATTCGGAAATTATGTTGTTCAATTTATCTTGGACTTGAAGATTTCATCTGTCACCACATGCATAAGGTTGCAATTTGAAGGCAACTATGTGCACCTATCAAGACAGAAGTTTGGTAGTCATGTGGTTGAAAAATGTCTTGCTGCATTCAATGATGAGAATCGATCAAGAGTCATTCTTGAACTGCTCTCCACGCCTCACTTTGAACATTTGCTTCAAGATCCACATGCAAACTATGTTGTTCAATCAGCTCTTCGACATTCTGAGGGTCATTTACACAATTTACTAGTTGAAGCAATTGAGTCCCACAAAGCCGTTTCTCGAAACAGCCCGTATTCCAAGAAGATTTTCTCGCAGAAGCTTTTGAAGAAATGA
Predicted protein sequences of Glyma.05g118200
>Glyma.05g118200.1.p sequence-type=predicted peptide transcript=Glyma.05g118200.1 locus=Glyma.05g118200 id=Glyma.05g118200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGKEILENVKDDGGLEELEMLLNEIPQATSHNLYHGKSHDVVVHHGDDDDHRHGSFVVSHGMCDDDHPFTQVQYPCVSSPVSGFSLQSDGSSSSLFSSSGHALSDTGSPTPPPLEDLKSTTMPSSGGSSSHPNNRFITPDSTLIRNANGGLVNELGGLCANFSQMYISNQQESPCDFKDASMAMHRPPFPECVSFTGNGPSNVHKHGDSYSFRRGSFDCVGVQSPLPWSPRNQDTDMNSALMANLFGSRQCAKRSEPMLSQLNDFSGSMESPCHHHSRQLMDNYYFGRSRNQPPECTASLSRNPMVDALLYAQKNGMNVTEERGMLRLPSSSRGINLRPYLGVQDLLQYRHSHSLPNSSRAVPLSNARIPQRNIDAIASEGSFIIQGEGVNYVASRGLDRSMYHSKAAVQDTGFARNLKRSELDMPYQVVGTYDNTRGARIGCSFPLLPKYSSLAEAQGYIYLMAKDQHGCRFLQKMFDEGTPEDVLMIFNEIIDHVVELMMNPFGNYLMQKLLDVCNEEQRMQILLIITEEPGQLVRISLNTHGTRVVQKLVETLKTRQQISLAVSALEPGFLALIKDLNGNHVVQRCLLCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSSGEYREKLIAEICANALLLAQDQFGNYVVQFILDLKISSVTTCIRLQFEGNYVHLSRQKFGSHVVEKCLAAFNDENRSRVILELLSTPHFEHLLQDPHANYVVQSALRHSEGHLHNLLVEAIESHKAVSRNSPYSKKIFSQKLLKK*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo