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Report for Sequence Feature Glyma.05g094200

Feature Type:gene_model
Chromosome:Gm05
Start:23937881
stop:23938499
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.05g094200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G27160.1AT Ribosomal protein S21 family protein JGI N/AIEA
GO:0006412GO-bp translation EnsemblGenomesN/AIEA
GO:0005840GO-cc ribosome EnsemblGenomesN/AIEA
GO:0003735GO-mf structural constituent of ribosome EnsemblGenomesN/AIEA

Expression Patterns of Glyma.05g094200
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.05g094200 not represented in the dataset
Glyma.05g094200 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.05g094200 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g19611 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g094200
>Glyma.05g094200.1 sequence-type=CDS polypeptide=Glyma.05g094200.1.p locus=Glyma.05g094200 ID=Glyma.05g094200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACAACATCAGCATCAACATCTGCATCTGCGCGTGCAATTGGAATCGATAATGATTCCTCAATTAAGAGTATATTATACCCTGCACTCTCCCTTTCCAACATTCTTCACTTCAATGTGCAGATCATGGTGGGCGAGGACGAGCCCGAGGACAGAATCATCAACCGCTTTAAGAAGGAGGTCCTCAAAGCCGACGACAAGATCAAGAGGAAGGCCTGCGAAGCTTCTAGAAGGAATCGAAAGAGGTTGTTTTACTTTCCTTTCCCTATCAAAATAAAAAACAATAAACATGATTCTGAAAAGAAGAAAAAGGATGCTGCTCATGATGATATTGATGATTGGGAACTTCCACATGTAGGTATTCCGTATACTTGA
Predicted protein sequences of Glyma.05g094200
>Glyma.05g094200.1.p sequence-type=predicted peptide transcript=Glyma.05g094200.1 locus=Glyma.05g094200 ID=Glyma.05g094200.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTTSASTSASARAIGIDNDSSIKSILYPALSLSNILHFNVQIMVGEDEPEDRIINRFKKEVLKADDKIKRKACEASRRNRKRLFYFPFPIKIKNNKHDSEKKKKDAAHDDIDDWELPHVGIPYT*






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