Glyma.05g091000

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Report for Sequence Feature Glyma.05g091000

Feature Type:	gene_model
Chromosome:	Gm05
Start:	20956915
stop:	20958303
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.05g091000

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT4G00570.1	AT	NAD-dependent malic enzyme 2	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	JGI	N/A	IEA
GO:0016616	GO-mf	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	JGI	N/A	IEA
GO:0051287	GO-mf	NAD binding	EnsemblGenomes	N/A	IEA
GO:0051287	GO-mf	NAD binding	JGI	N/A	IEA
PTHR23406	Panther	MALIC ENZYME-RELATED	JGI	N/A	IEA
PTHR23406:SF2	Panther	NAD-DEPENDENT MALIC ENZYME, MITOCHONDRIAL	JGI	N/A	IEA
PF03949	PFAM	Malic enzyme, NAD binding domain	JGI	N/A	IEA
GLUCONEO-PWY	SoyCyc9	gluconeogenesis I	Plant Metabolic Network		ISS
GN7V-64324	SoyCyc9-rxn	malate dehydrogenase (oxaloacetate-decarboxylating)	Plant Metabolic Network		ISS

Expression Patterns of Glyma.05g091000

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.05g091000 not represented in the dataset	Glyma.05g091000 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.05g091000 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma05g17947	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.05g091000

Limit To All Plant Sequences

>Glyma.05g091000.2 sequence-type=transcript locus=Glyma.05g091000 ID=Glyma.05g091000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGGGTCTTGTCACGACAGAAAGGAGCAATCTAGATCCAGCTGCAGTTACATTTGCCAAAAATCCAAGAGATCTTGAAAGGCTTTCAAAGGGTGCTAGTATAATTGAAGTAGTTAAGAAGGTTAAGCCACATGTGCTCCTTGGATTGTCAGGAGTTGGTGGTGTTTTCAACGCAGAGGGACTAGATAGTTTAACCTGTTGCACTACTCTGTCAAATGGAAGATCCATCATTTTTTGA

Coding sequences of Glyma.05g091000

Limit To All Plant Sequences

>Glyma.05g091000.1 sequence-type=CDS polypeptide=Glyma.05g091000.1.p locus=Glyma.05g091000 ID=Glyma.05g091000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGGGTCTTGTCACGACAGAAAGGAGCAATCTAGATCCAGCTGCAGTTACATTTGCCAAAAATCCAAGAGATCTTGAAAGGCTTTCAAAGGGTGCTAGTATAATTGAAGTAGTTAAGAAGGTTAAGCCACATGTGCTCCTTGGATTGTCAGGAGTTGGTGGTGTTTTCAACGCAGAGGTGCTTAAGGCAATGAGAGAATCTGTTTCAACAAAACCTACTATCTTTGCAATGTCTAATCCCATCATATGGTAA

>Glyma.05g091000.2 sequence-type=CDS polypeptide=Glyma.05g091000.2.p locus=Glyma.05g091000 ID=Glyma.05g091000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCAGGGTCTTGTCACGACAGAAAGGAGCAATCTAGATCCAGCTGCAGTTACATTTGCCAAAAATCCAAGAGATCTTGAAAGGCTTTCAAAGGGTGCTAGTATAATTGAAGTAGTTAAGAAGGTTAAGCCACATGTGCTCCTTGGATTGTCAGGAGTTGGTGGTGTTTTCAACGCAGAGGGACTAGATAGTTTAACCTGTTGCACTACTCTGTCAAATGGAAGATCCATCATTTTTTGA

Predicted protein sequences of Glyma.05g091000

Limit To All Plant Sequences

>Glyma.05g091000.1.p sequence-type=predicted peptide transcript=Glyma.05g091000.1 locus=Glyma.05g091000 ID=Glyma.05g091000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQGLVTTERSNLDPAAVTFAKNPRDLERLSKGASIIEVVKKVKPHVLLGLSGVGGVFNAEVLKAMRESVSTKPTIFAMSNPIIW*

>Glyma.05g091000.2.p sequence-type=predicted peptide transcript=Glyma.05g091000.2 locus=Glyma.05g091000 ID=Glyma.05g091000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MQGLVTTERSNLDPAAVTFAKNPRDLERLSKGASIIEVVKKVKPHVLLGLSGVGGVFNAEGLDSLTCCTTLSNGRSIIF*

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