SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g090600

Feature Type:gene_model
Chromosome:Gm05
Start:15469397
stop:15473193
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g090600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G50560.1AT JGI N/AIEA
1.1.1.102EC 3-dehydrosphinganine reductase JGI N/AIEA
KOG1014 KOG 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 JGI N/AIEA
PTHR24322PantherFam PKSB JGI N/AIEA
PF13561Pfam Enoyl-(Acyl carrier protein) reductase JGI N/AIEA

Gene model name correspondences to Glyma.05g090600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g10390 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g090600
>Glyma.05g090600.1 sequence-type=CDS polypeptide=Glyma.05g090600.1.p locus=Glyma.05g090600 id=Glyma.05g090600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCGAAGCATGGCAAGCTCGGCTTCCTCGCGAGGCATTGCAGCCATCGTCGGTGTGGGCCCCAACCTTGGCCTCTCCATCGCTCGCAAGTTCGCTCACGAAGGCTACACAGTTGCCATCCTCGCGCGTGACTTGGGGAGGTTGTCAAGATTTGCTGACGAAATAGCGAGGGAAGAGAAGGCGCAGGTTTTTGCTATAAGAATAGACTGTTCCGATTCAAGAAGCGTGAGAGAGGCATTTGAAGGAGTTCTCTCTCTGGGGTTCGTGGAAATTCTCGTCTACAATGCTTACCAGCCATTACCTTGGTACCCCACCTCCTTCCAAGACCTTCGCGTTGATTCCTTCGAAAAATCCCTCGCCATTTCTTCCGTCGGTGCCTTCCACTGCGCTCAACAGGTGCTGTCGGGCATGGTTGAAAGGGGAAAGGGAACGATTCTCTTCACTGGCTGCTCCGCTTCTCTGAACGGCATTGTTGGATACTCTGAACTATGCTGTGGGAAATTCGCTTTGAGAGCACTATCGCAATGTTTGGCCAAGGAATTTCAACCTCAGGGAGTGCACGTAGCTCATGTTATCATTGACGGTGTCATTGGCCCACCCAGAGGACCAATGTTGACGACGACGTCATCATCGTCGCAGAGGAGAAATTCATTGGGGGAGCAAAGCAGTGGAGTAGTGGGAGGAGGTGAGGGTACTATGGACCCGGACTCACTCGCTCAAACCTTCTGGCACTTGCACGTTCAGGACCGAAACGCTTGGACCCAGGAGATGGATCTTCGCTCACCCTCTGCTAGATTCTTCTAG
Predicted protein sequences of Glyma.05g090600
>Glyma.05g090600.1.p sequence-type=predicted peptide transcript=Glyma.05g090600.1 locus=Glyma.05g090600 id=Glyma.05g090600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRSMASSASSRGIAAIVGVGPNLGLSIARKFAHEGYTVAILARDLGRLSRFADEIAREEKAQVFAIRIDCSDSRSVREAFEGVLSLGFVEILVYNAYQPLPWYPTSFQDLRVDSFEKSLAISSVGAFHCAQQVLSGMVERGKGTILFTGCSASLNGIVGYSELCCGKFALRALSQCLAKEFQPQGVHVAHVIIDGVIGPPRGPMLTTTSSSSQRRNSLGEQSSGVVGGGEGTMDPDSLAQTFWHLHVQDRNAWTQEMDLRSPSARFF*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo