SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g088400

Feature Type:gene_model
Chromosome:Gm05
Start:13775420
stop:13778506
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g088400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G13530.2AT KEG JGI N/AIEA
2.7.11.1EC non-specific serine/threonine protein kinase JGI N/AIEA
KOG4412 KOG 26S proteasome regulatory complex, subunit PSMD10 JGI N/AIEA
PTHR24198PantherFam ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF00635Pfam MSP (Major sperm protein) domain JGI N/AIEA
PF12796Pfam Ankyrin repeats (3 copies) JGI N/AIEA

Gene model name correspondences to Glyma.05g088400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g12224 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g088400
>Glyma.05g088400.1 sequence-type=CDS polypeptide=Glyma.05g088400.1.p locus=Glyma.05g088400 id=Glyma.05g088400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGACAGGCTCATAAGGTTAGACCCTTCAAACACAGTCCTAATCAGGGTTGAGCCAGGGCAAAAGTGCCACGGCAGGATCACCTTACACAACGTGATGTACACAATGCCAGTGGCCTTCAGGCTTCAACCACTCATCAAGACCCGTTACACAGTGAAGCCCCAATCAGGGATCATATCCCCTTTAGCCACACTTACCATAGACATCACCTACCATCTCCCACAAGGCTCGTCTCTCCCCCACTCTTTCCCTCACTCGAACGACTCTTTCCTCTTACACAGCGTTTTGGTTCCCGGCGCCGCCATCAAGGAACCCTCCTCCATGTTCGATGCTGTCCCCAGTGACTTGTTCAAGAAGAAACAGGTCTTCATCGACAGCGCCATCAGGGTCATGTTTGTGGGGCCTCACATTCTGGCTCGGCTAGTAACACAAGGTGCAACGGATGAAATAAGAGAAGTTTTAGAGAAAAGTGACCCATCATGGAGAAATGTTAACTCGACAGACCCACAAGGCCAAACGTTGCTCCACTTGGCGATTTCGCAAGGTAGAGCTGATCTCGTTCAGTTGCTCCTAGAATTCGAGGCTGACGTCGAAGCCTTAAACCGTTCTGGCTCAACCCCACTTGAGGCTGCATCGTCCTGCAACGAAGCCTTAATTGTTGAGCTTCTTTTGGCCCACAAAGCCAACACAGAACGGTCGGAATTGTCCATGTTCGGTCCGATCCACCACGCAGCCAGAGGAGGACACGTGGAGGTTATGAGACTTCTCTTGCTCAAAGGTGCCAAAGTGGATTCACTCGCTAAAGATGGCAACACAGCCTTGCACGTTGCAGTTGAAGAGCACACAAAGGACTGTGTTAGACTCCTTCTGGCAAACGGTGCCAGAACAGACGCTAAAAATACAAGAGAAGGTGACACGCCTTTGCACGTGGCATCAGCAATAGGAGATGAGAGCATGGTGAAGCTCTTGCTGCAAAAGGGTGGTGCCAACAAAGACGTGAGAAACAGACAAGGGAGAACCGCGTATGATATTGCAGTGGAAAACGGCCATGCACACCTCTACGACGCCTTGTGTTTGGGGGACAAACTGTGCGTGGCAGCAAGGAAAGGGGAAGTGAGGAGCATCCACAAGCTTCTAGAGAATGGTGCAGGGATCAATGGGAGGGACCAAAATGGTTGGACATCGCTGCACAGGGCCTCGTTCAAAGGGAGAATCGACACTGTGAAGCTTCTTGTAGAGAAGGGGGCGGAGGTGGATGCAAAGGACGAAGAAGGGTACACGGCGTTGCACTGTGCTGCTGAGTCGGGGCATGCTGACGTGACTGAGTTTTTGGTGAAGAGAGGTGCTGATGTTGAAGCCAGGACTAGGAAGGGTGTGAGTGCGTTGCAAATAGCTGAGTCGTTGCACTACGTGGGGATTACGAGGGTTCTTGTTAATGGTGGGGCCAGTAGGGAAAATTGTGATGTGGGTAAAGTGGCGGCACTTGGTGCAATTGCGTTTGGGACTAAAATGGAAGCTAGGGGTGTCATGAATAAAAAGAAGAGGGGTGGTGGTGGCAGAGCCAGAATGCTAAATGGTGCTAGCTTTGATCGTTCAATGGCTCTGGCTGTGCTCTAA
Predicted protein sequences of Glyma.05g088400
>Glyma.05g088400.1.p sequence-type=predicted peptide transcript=Glyma.05g088400.1 locus=Glyma.05g088400 id=Glyma.05g088400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDRLIRLDPSNTVLIRVEPGQKCHGRITLHNVMYTMPVAFRLQPLIKTRYTVKPQSGIISPLATLTIDITYHLPQGSSLPHSFPHSNDSFLLHSVLVPGAAIKEPSSMFDAVPSDLFKKKQVFIDSAIRVMFVGPHILARLVTQGATDEIREVLEKSDPSWRNVNSTDPQGQTLLHLAISQGRADLVQLLLEFEADVEALNRSGSTPLEAASSCNEALIVELLLAHKANTERSELSMFGPIHHAARGGHVEVMRLLLLKGAKVDSLAKDGNTALHVAVEEHTKDCVRLLLANGARTDAKNTREGDTPLHVASAIGDESMVKLLLQKGGANKDVRNRQGRTAYDIAVENGHAHLYDALCLGDKLCVAARKGEVRSIHKLLENGAGINGRDQNGWTSLHRASFKGRIDTVKLLVEKGAEVDAKDEEGYTALHCAAESGHADVTEFLVKRGADVEARTRKGVSALQIAESLHYVGITRVLVNGGASRENCDVGKVAALGAIAFGTKMEARGVMNKKKRGGGGRARMLNGASFDRSMALAVL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo