SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g087300

Feature Type:gene_model
Chromosome:Gm05
Start:12386917
stop:12389576
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g087300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G22480.2AT PDF2 JGI N/AIEA
GO:0006457GO-bp protein folding JGI N/AIEA
GO:0016272GO-cc prefoldin complex JGI N/AIEA
GO:0051082GO-mf unfolded protein binding JGI N/AIEA
K09549KEGG Chaperones and folding catalysts JGI N/AIEA
KOG4098 KOG Molecular chaperone Prefoldin, subunit 2 JGI N/AIEA
PTHR13303PantherFam PREFOLDIN SUBUNIT 2 JGI N/AIEA
PF01920Pfam Prefoldin subunit JGI N/AIEA

Gene model name correspondences to Glyma.05g087300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g13110 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g087300
>Glyma.05g087300.1 sequence-type=CDS polypeptide=Glyma.05g087300.1.p locus=Glyma.05g087300 id=Glyma.05g087300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATAATTTGGCGACAACTGAAATAATCATGGCCAAAGCTGAAGGTGGCAAGGAACCAATAAATGAACAAGCAGTAGCAAATATGTATGCTGCAATGAGGTCTGAGCTCAACCAAATTTACTCCAAAATAACTGAACTGGAGATGGAAGTTAGTGAGCACACATTGGTTACCAATGCCATTCAACCACTTGACCAATCTAGACGATGCTATCGTATGATTGGAGGGGTGCTTGTGGAGAGAACCATCAAAGAGGTCTTGCCTGCTGTGCAGCGAAATAAAGAAGGACTCGAAGAGGTTGTGGCAAGGCTTAACGAGGCGTTGGAAAAGAAGAAAAAGGAAATTTCTGAGTTTGAGGCTAATTATAAAATCAGGATAAGGAAGGCTGATGCTGAGGTGAAGGATGAATCTGGTAGGAAGGAAGGGTCTGCTCAAGGGGTTCTTGTGGGTCCTGCAGGTGGAAGTGAATGA

>Glyma.05g087300.2 sequence-type=CDS polypeptide=Glyma.05g087300.2.p locus=Glyma.05g087300 id=Glyma.05g087300.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCAAAGCTGAAGGTGGCAAGGAACCAATAAATGAACAAGCAGTAGCAAATATGTATGCTGCAATGAGGTCTGAGCTCAACCAAATTTACTCCAAAATAACTGAACTGGAGATGGAAGTTAGTGAGCACACATTGGTTACCAATGCCATTCAACCACTTGACCAATCTAGACGATGCTATCGTATGATTGGAGGGGTGCTTGTGGAGAGAACCATCAAAGAGGTCTTGCCTGCTGTGCAGCGAAATAAAGAAGGACTCGAAGAGGTTGTGGCAAGGCTTAACGAGGCGTTGGAAAAGAAGAAAAAGGAAATTTCTGAGTTTGAGGCTAATTATAAAATCAGGATAAGGAAGGCTGATGCTGAGGTGAAGGATGAATCTGGTAGGAAGGAAGGGTCTGCTCAAGGGGTTCTTGTGGGTCCTGCAGGTGGAAGTGAATGA

>Glyma.05g087300.3 sequence-type=CDS polypeptide=Glyma.05g087300.3.p locus=Glyma.05g087300 id=Glyma.05g087300.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCAAAGCTGAAGGTGGCAAGGAACCAATAAATGAACAAGCAGTAGCAAATATGTATGCTGCAATGAGGTCTGAGCTCAACCAAATTTACTCCAAAATAACTGAACTGGAGATGGAAGTTAGTGAGCACACATTGGTTACCAATGCCATTCAACCACTTGACCAATCTAGACGATGCTATCGTATGATTGGAGGGGTGCTTGTGGAGAGAACCATCAAAGAGGTCTTGCCTGCTGTGCAGCGAAATAAAGAAGGACTCGAAGAGGTTGTGGCAAGGCTTAACGAGGCGTTGGAAAAGAAGAAAAAGGAAATTTCTGAGTTTGAGGCTAATTATAAAATCAGGATAAGGAAGGCTGATGCTGAGGTGAAGGATGAATCTGGTAGGAAGGAAGGGTCTGCTCAAGGGGTTCTTGTGGGTCCTGCAGGTGGAAGTGAATGA
Predicted protein sequences of Glyma.05g087300
>Glyma.05g087300.1.p sequence-type=predicted peptide transcript=Glyma.05g087300.1 locus=Glyma.05g087300 id=Glyma.05g087300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDNLATTEIIMAKAEGGKEPINEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEANYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE*

>Glyma.05g087300.2.p sequence-type=predicted peptide transcript=Glyma.05g087300.2 locus=Glyma.05g087300 id=Glyma.05g087300.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAKAEGGKEPINEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEANYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE*

>Glyma.05g087300.3.p sequence-type=predicted peptide transcript=Glyma.05g087300.3 locus=Glyma.05g087300 id=Glyma.05g087300.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAKAEGGKEPINEQAVANMYAAMRSELNQIYSKITELEMEVSEHTLVTNAIQPLDQSRRCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARLNEALEKKKKEISEFEANYKIRIRKADAEVKDESGRKEGSAQGVLVGPAGGSE*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo