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Report for Sequence Feature Glyma.05g083300

Feature Type:gene_model
Chromosome:Gm05
Start:17495470
stop:17501590
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g083300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G52270.1AT JGI N/AIEA
3.6.4.12EC DNA helicase JGI N/AIEA
GO:0006366GO-bp transcription by RNA polymerase II JGI N/AIEA
GO:0006367GO-bp transcription initiation from RNA polymerase II promoter JGI N/AIEA
GO:0005674GO-cc transcription factor TFIIF complex JGI N/AIEA
K03139KEGG Transcription machinery JGI N/AIEA
KOG2905 KOG Transcription initiation factor IIF, small subunit (RAP30) JGI N/AIEA
PTHR10445PantherFam GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 JGI N/AIEA
PTHR10445:SF2PantherFam TRANSCRIPTION INITIATION FACTOR IIF SUBUNIT BETA JGI N/AIEA
PF02270Pfam TFIIF, beta subunit HTH domain JGI N/AIEA

Gene model name correspondences to Glyma.05g083300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g17240 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g083300
>Glyma.05g083300.1 sequence-type=CDS polypeptide=Glyma.05g083300.1.p locus=Glyma.05g083300 id=Glyma.05g083300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGACCAATGTGGTGGTAATGGTAAACACATGAACACGAACACGAACAGCAATGGTTACGTGGACACGTCGAAGGCGGAGAGAGCAGTGTGGCTGATGAAGTGCCCTCCCCTCGTCTCTCGCTCCCTCCGCGCTCCTCCCTCCGACCCCTCTCGCCCCGTTGCCAAGGTCGTCGTCTCCATCGACCCCCTCAACTCCAACGACGACGATTCTCCCCCTCAGTTTACAATGGAGTTGGCCGGAACTGAAGCTGGACATATACCCAGATGTTATGTTATGGATATGTCTAAAGACTTCATTCCCATGTCTGTGTTTTCTGACACACCACAAGGAAAGATCTCTGTGGAGGGAAAAATACTGAACAAGTTTGACATGAGGCCCCATAATCAAACCCTTGAACTCTATGGTAAACTCTGCCGTGAAAGGACAAACAAGTATATGGTCAAAAGTAGACAGATACAGGTTATTGACAACGATAGTGGGGCACATATGAGGCCAATGCCAGGGATGATAAGTTTTTCCACTTCTGGACCCAGTGAAAAGAAGAAATCTCCAGCTAAAGCAACGGATACGAAGAGAACAAGAAGAGACCGTGGAGAGATGGAAGAGATTGTGTTCAAGCTATTTGAACGGCAGCCAAATTGGAGTTTAAGAAACCTCATACAAGAAACCGACCAACCTGAACAATTTCTGAAAGATATACTAAAAGACCTTTGTGTCTACAACAACAAAGGAACTAATCAAGGCACGTATGAACTGAAGCCTGAATACAGAAAATCTGGCGATTAA

>Glyma.05g083300.2 sequence-type=CDS polypeptide=Glyma.05g083300.2.p locus=Glyma.05g083300 id=Glyma.05g083300.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGTTGGCCGGAACTGAAGCTGGACATATACCCAGATGTTATGTTATGGATATGTCTAAAGACTTCATTCCCATGTCTGTGTTTTCTGACACACCACAAGGAAAGATCTCTGTGGAGGGAAAAATACTGAACAAGTTTGACATGAGGCCCCATAATCAAACCCTTGAACTCTATGGTAAACTCTGCCGTGAAAGGACAAACAAGTATATGGTCAAAAGTAGACAGATACAGGTTATTGACAACGATAGTGGGGCACATATGAGGCCAATGCCAGGGATGATAAGTTTTTCCACTTCTGGACCCAGTGAAAAGAAGAAATCTCCAGCTAAAGCAACGGATACGAAGAGAACAAGAAGAGACCGTGGAGAGATGGAAGAGATTGTGTTCAAGCTATTTGAACGGCAGCCAAATTGGAGTTTAAGAAACCTCATACAAGAAACCGACCAACCTGAACAATTTCTGAAAGATATACTAAAAGACCTTTGTGTCTACAACAACAAAGGAACTAATCAAGGCACGTATGAACTGAAGCCTGAATACAGAAAATCTGGCGATTAA

>Glyma.05g083300.5 sequence-type=CDS polypeptide=Glyma.05g083300.5.p locus=Glyma.05g083300 id=Glyma.05g083300.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGGCCCCATAATCAAACCCTTGAACTCTATGGTAAACTCTGCCGTGAAAGGACAAACAAGTATATGGTCAAAAGTAGACAGATACAGGTTATTGACAACGATAGTGGGGCACATATGAGGCCAATGCCAGGGATGATAAGTTTTTCCACTTCTGGACCCAGTGAAAAGAAGAAATCTCCAGCTAAAGCAACGGATACGAAGAGAACAAGAAGAGACCGTGGAGAGATGGAAGAGATTGTGTTCAAGCTATTTGAACGGCAGCCAAATTGGAGTTTAAGAAACCTCATACAAGAAACCGACCAACCTGAACAATTTCTGAAAGATATACTAAAAGACCTTTGTGTCTACAACAACAAAGGAACTAATCAAGGCACGTATGAACTGAAGCCTGAATACAGAAAATCTGGCGATTAA
Predicted protein sequences of Glyma.05g083300
>Glyma.05g083300.1.p sequence-type=predicted peptide transcript=Glyma.05g083300.1 locus=Glyma.05g083300 id=Glyma.05g083300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEDQCGGNGKHMNTNTNSNGYVDTSKAERAVWLMKCPPLVSRSLRAPPSDPSRPVAKVVVSIDPLNSNDDDSPPQFTMELAGTEAGHIPRCYVMDMSKDFIPMSVFSDTPQGKISVEGKILNKFDMRPHNQTLELYGKLCRERTNKYMVKSRQIQVIDNDSGAHMRPMPGMISFSTSGPSEKKKSPAKATDTKRTRRDRGEMEEIVFKLFERQPNWSLRNLIQETDQPEQFLKDILKDLCVYNNKGTNQGTYELKPEYRKSGD*

>Glyma.05g083300.2.p sequence-type=predicted peptide transcript=Glyma.05g083300.2 locus=Glyma.05g083300 id=Glyma.05g083300.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MELAGTEAGHIPRCYVMDMSKDFIPMSVFSDTPQGKISVEGKILNKFDMRPHNQTLELYGKLCRERTNKYMVKSRQIQVIDNDSGAHMRPMPGMISFSTSGPSEKKKSPAKATDTKRTRRDRGEMEEIVFKLFERQPNWSLRNLIQETDQPEQFLKDILKDLCVYNNKGTNQGTYELKPEYRKSGD*

>Glyma.05g083300.5.p sequence-type=predicted peptide transcript=Glyma.05g083300.5 locus=Glyma.05g083300 id=Glyma.05g083300.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MRPHNQTLELYGKLCRERTNKYMVKSRQIQVIDNDSGAHMRPMPGMISFSTSGPSEKKKSPAKATDTKRTRRDRGEMEEIVFKLFERQPNWSLRNLIQETDQPEQFLKDILKDLCVYNNKGTNQGTYELKPEYRKSGD*






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