Glyma.05g080400

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Report for Sequence Feature Glyma.05g080400

Feature Type:	gene_model
Chromosome:	Gm05
Start:	11808358
stop:	11813974
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.05g080400

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G50520.1	AT	Phosphoglycerate mutase family protein	JGI	N/A	IEA
GO:0008152	GO-bp	metabolic process	EnsemblGenomes	N/A	IEA
GO:0016311	GO-bp	dephosphorylation	EnsemblGenomes	N/A	IEA
GO:0005829	GO-cc	cytosol	EnsemblGenomes	N/A	IEA
GO:0003824	GO-mf	catalytic activity	EnsemblGenomes	N/A	IEA
GO:0016791	GO-mf	phosphatase activity	EnsemblGenomes	N/A	IEA
KOG0235	KOG	Phosphoglycerate mutase	JGI	N/A	IEA
PTHR23029	Panther	PHOSPHOGLYCERATE MUTASE	JGI	N/A	IEA
PF00300	PFAM	Histidine phosphatase superfamily (branch 1)	JGI	N/A	IEA
GN7V-64526	SoyCyc9-rxn	phosphoserine phosphatase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.05g080400

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.05g080400 not represented in the dataset	Glyma.05g080400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.05g080400 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma05g10140	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.05g080400

Limit To All Plant Sequences

>Glyma.05g080400.2 sequence-type=transcript locus=Glyma.05g080400 ID=Glyma.05g080400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATATAAAGATCAGCGAAAACAAGCGCAGCTTCATTGTTTGACTCTGACTCACTCGCTCGCTCCCTCCCTCAGAAACCATGGCCGAATTTGCcatcaacaacaacaacaacGGTTCCCATTCCAGCATTAACAGCCCCCATCCTGATTATGCGGAGATTGTTGTGGTGCGTCATGGCGAAACAGCTTGGAATGCTACTGCAAAAATCCAGGGGCACCTGGATGTTGAATTAAATGAAAATGGAAGACAGCAAGCAGCTGTAGTGGCTGATAGACTATCCAGGGAACCTAAGGCCTCTGTTATATATTCTTCTGACTTGAAACGGGCTTTTGAAACAGCACTGATAGTTGCATCCAAGTGTGGAGGGATCGAGGTTGTCAAGGATTCTGACCTACGGGAGAGACACCTAGGGGATCTTCAAGGCCATGTTTTTCATGAAATAGCAAAAACTAATCCCACAGCTTACAAGGCTTTTGTGTCTAAGAACGAAGATCAAGAAATACCAGGTGGTGGAGAAAGTCTTGTTCAACTTTATGATCGCAGCACATCTGCATTGCTTAAAATTGGCTTAAAGCATAAAGGGGAGCGAGTAATTGTTGTCTCTCATGGAGGATTCATCAGAGCCCTTTACAAGTGGGCATGCCCAAATGGTAAGCCTGGGAAGGTACTCAATACATGTGTTAGTGTTTTTCACTTGTACGGTGAGGACAAATGGACCTTAAAAGTGTGGGGTGATGTCAGTCATCTGAACGAAACTGGATTTCTAGAGTCTGGTTTTGGAGGTGATAGAAATTCTGGTTAGGCCATTGTTTCCTATTTAAGGTAATAAAGGTTTGATTGTTTCCCATCCGAAGTTAATAAAAGATTAGAGAAAGAGCAGAAAATGGATATTAATCAGTGGTGCTAAATATGATTTTGGCCCCTATTTATGTTTTGTATCTTAGCATGCAAATATATGGTCACCATGTAAGGATATGCCTAAACTATTTAATTTTGTGGAGGTGATGTCAATCTCCTTTATAGAATTGTTTCTTTTAAAATCTTTTCGAAGCTTTCATGGAGTGATGAATGTAATGATACACTTTTCATGTTAGTATTTTTAATTTGTATATATCGGTAAGCCTTTTAAACATCCATAGCATGCATGACTACAAACGATAGAAGTTTGAAGGCTCGTC

>Glyma.05g080400.3 sequence-type=transcript locus=Glyma.05g080400 ID=Glyma.05g080400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATATAAAGATCAGCGAAAACAAGCGCAGCTTCATTGTTTGACTCTGACTCACTCGCTCGCTCCCTCCCTCAGAAACCATGGCCGAATTTGCcatcaacaacaacaacaacGGTTCCCATTCCAGCCCCCATCCTGATTATGCGGAGATTGTTGTGGTGCGTCATGGCGAAACAGCTTGGAATGCTACTGCAAAAATCCAGGGGCACCTGGATGTTGAATTAAATGAAAATGGAAGACAGCAAGCAGCTGTAGTGGCTGATAGACTATCCAGGGAACCTAAGGCCTCTGTTATATATTCTTCTGACTTGAAACGGGCTTTTGAAACAGCACTGATAGTTGCATCCAAGTGTGGAGGGATCGAGGTTGTCAAGGATTCTGACCTACGGGAGAGACACCTAGGGGATCTTCAAGGCCATGTTTTTCATGAAATAGCAAAAACTAATCCCACAGCTTACAAGGCTTTTGTGTCTAAGAACGAAGATCAAGAAATACCAGGTGGTGGAGAAAGTCTTGTTCAACTTTATGATCGCAGCACATCTGCATTGCTTAAAATTGGCTTAAAGCATAAAGGGGAGCGAGTAATTGTTGTCTCTCATGGAGGATTCATCAGAGCCCTTTACAAGTGGGCATGCCCAAATGGTAAGCCTGGGAAGGTACTCAATACATGTGTTAGTGTTTTTCACTTGTACGGTGAGGACAAATGGACCTTAAAAGTGTGGGGTGATGTCAGTCATCTGAACGAAACTGGATTTCTAGAGTCTGGTTTTGGAGGTGATAGAAATTCTGGTTAGGCCATTGTTTCCTATTTAAGGTAATAAAGGTTTGATTGTTTCCCATCCGAAGTTAATAAAAGATTAGAGAAAGAGCAGAAAATGGATATTAATCAGTGGTGCTAAATATGATTTTGGCCCCTATTTATGTTTTGTATCTTAGCATGCAAATATATGGTCACCATGTAAGGATATGCCTAAACTATTTAATTTTGTGGAGGTGATGTCAATCTCCTTTATAGAATTGTTTCTTTTAAAATCTTTTCGAAGCTTTCATGGAGTGATGAATGTAATGATACACTTTTCATGTTAGTATTTTTAATTTGTATATATCGGTAAGCCTTTTAAACATCCATAGCATGCATGACTACAAACGATAGAAGTTTGAAGGCTCGTC

>Glyma.05g080400.4 sequence-type=transcript locus=Glyma.05g080400 ID=Glyma.05g080400.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATATAAAGATCAGCGAAAACAAGCGCAGCTTCATTGTTTGACTCTGACTCACTCGCTCGCTCCCTCCCTCAGAAACCATGGCCGAATTTGCcatcaacaacaacaacaacGGTTCCCATTCCAGCATTAACAGCCCCCATCCTGATTATGCGGAGATTGTTGTGGTGCGTCATGGCGAAACAGCTTGGAATGCTACTGCAAAAATCCAGGGGCACCTGGATGTTGAATTAAATGAAAATGGAAGACAGCAAGCAGCTGTAGTGGCTGATAGACTATCCAGGGAACCTAAGGCCTCTGTTATATATTCTTCTGACTTGAAACGGGCTTTTGAAACAGCACTGATAGTTGCATCCAAGTGTGGAGGGATCGAGGTTGTCAAGGATTCTGACCTACGGGAGAGACACCTAGGGGATCTTCAAGGCCATGTTTTTCATGAAATAGCAAAAACTAATCCCACAGCTTACAAGGCTTTTGTGTCTAAGAACGAAGATCAAGAAATACCAGGTGGTGGAGAAAGTCTTGTTCAACTTTATGATCGCAGCACATCTGCATTGCTTAAAATTGGCTTAAAGCATAAAGATGTTGTATCTCTTTTCAAAGTCCACTAACTGCTACATTAGGCTGATGTTAGCCGTGTTAATTGCAGGGGAGCGAGTAATTGTTGTCTCTCATGGAGGATTCATCAGAGCCCTTTACAAGTGGGCATGCCCAAATGGTAAGCCTGGGAAGGTACTCAATACATGTGTTAGTGTTTTTCACTTGTACGGTGAGGACAAATGGACCTTAAAAGTGTGGGGTGATGTCAGTCATCTGAACGAAACTGGATTTCTAGAGTCTGGTTTTGGAGGTGATAGAAATTCTGGTTAGGCCATTGTTTCCTATTTAAGGTAATAAAGGTTTGATTGTTTCCCATCCGAAGTTAATAAAAGATTAGAGAAAGAGCAGAAAATGGATATTAATCAGTGGTGCTAAATATGATTTTGGCCCCTATTTATGTTTTGTATCTTAGCATGCAAATATATGGTCACCATGTAAGGATATGCCTAAACTATTTAATTTTGTGGAGGTGATGTCAATCTCCTTTATAGAATTGTTTCTTTTAAAATCTTTTCGAAGCTTTCATGGAGTGATGAATGTAATGATACACTTTTCATGTTAGTATTTTTAATTTGTATATATCGGTAAGCCTTTTAAACATCCATAGCATGCATGACTACAAACGATAGAAGTTTGAAGGCTCGTC

Coding sequences of Glyma.05g080400

Limit To All Plant Sequences

>Glyma.05g080400.1 sequence-type=CDS polypeptide=Glyma.05g080400.1.p locus=Glyma.05g080400 ID=Glyma.05g080400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCGAATTTGCCATCAACAACAACAACAACGGTTCCCATTCCAGCATTAACAGCCCCCATCCTGATTATGCGGAGATTGTTGTGGTGCGTCATGGCGAAACAGCTTGGAATGCTACTGCAAAAATCCAGCCTTGGTATGTTCAAATTTCGCTCATATGTAAACAGGGGCACCTGGATGTTGAATTAAATGAAAATGGAAGACAGCAAGCAGCTGTAGTGGCTGATAGACTATCCAGGGAACCTAAGGCCTCTGTTATATATTCTTCTGACTTGAAACGGGCTTTTGAAACAGCACTGATAGTTGCATCCAAGTGTGGAGGGATCGAGGTTGTCAAGGATTCTGACCTACGGGAGAGACACCTAGGGGATCTTCAAGGCCATGTTTTTCATGAAATAGCAAAAACTAATCCCACAGCTTACAAGGCTTTTGTGTCTAAGAACGAAGATCAAGAAATACCAGGTGGTGGAGAAAGTCTTGTTCAACTTTATGATCGCAGCACATCTGCATTGCTTAAAATTGGCTTAAAGCATAAAGGGGAGCGAGTAATTGTTGTCTCTCATGGAGGATTCATCAGAGCCCTTTACAAGTGGGCATGCCCAAATGGTAAGCCTGGGAAGGTACTCAATACATGTGTTAGTGTTTTTCACTTGTACGGTGAGGACAAATGGACCTTAAAAGTGTGGGGTGATGTCAGTCATCTGAACGAAACTGGATTTCTAGAGTCTGGTTTTGGAGGTGATAGAAATTCTGGTTAG

>Glyma.05g080400.2 sequence-type=CDS polypeptide=Glyma.05g080400.2.p locus=Glyma.05g080400 ID=Glyma.05g080400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCGAATTTGCCATCAACAACAACAACAACGGTTCCCATTCCAGCATTAACAGCCCCCATCCTGATTATGCGGAGATTGTTGTGGTGCGTCATGGCGAAACAGCTTGGAATGCTACTGCAAAAATCCAGGGGCACCTGGATGTTGAATTAAATGAAAATGGAAGACAGCAAGCAGCTGTAGTGGCTGATAGACTATCCAGGGAACCTAAGGCCTCTGTTATATATTCTTCTGACTTGAAACGGGCTTTTGAAACAGCACTGATAGTTGCATCCAAGTGTGGAGGGATCGAGGTTGTCAAGGATTCTGACCTACGGGAGAGACACCTAGGGGATCTTCAAGGCCATGTTTTTCATGAAATAGCAAAAACTAATCCCACAGCTTACAAGGCTTTTGTGTCTAAGAACGAAGATCAAGAAATACCAGGTGGTGGAGAAAGTCTTGTTCAACTTTATGATCGCAGCACATCTGCATTGCTTAAAATTGGCTTAAAGCATAAAGGGGAGCGAGTAATTGTTGTCTCTCATGGAGGATTCATCAGAGCCCTTTACAAGTGGGCATGCCCAAATGGTAAGCCTGGGAAGGTACTCAATACATGTGTTAGTGTTTTTCACTTGTACGGTGAGGACAAATGGACCTTAAAAGTGTGGGGTGATGTCAGTCATCTGAACGAAACTGGATTTCTAGAGTCTGGTTTTGGAGGTGATAGAAATTCTGGTTAG

>Glyma.05g080400.3 sequence-type=CDS polypeptide=Glyma.05g080400.3.p locus=Glyma.05g080400 ID=Glyma.05g080400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCGAATTTGCCATCAACAACAACAACAACGGTTCCCATTCCAGCCCCCATCCTGATTATGCGGAGATTGTTGTGGTGCGTCATGGCGAAACAGCTTGGAATGCTACTGCAAAAATCCAGGGGCACCTGGATGTTGAATTAAATGAAAATGGAAGACAGCAAGCAGCTGTAGTGGCTGATAGACTATCCAGGGAACCTAAGGCCTCTGTTATATATTCTTCTGACTTGAAACGGGCTTTTGAAACAGCACTGATAGTTGCATCCAAGTGTGGAGGGATCGAGGTTGTCAAGGATTCTGACCTACGGGAGAGACACCTAGGGGATCTTCAAGGCCATGTTTTTCATGAAATAGCAAAAACTAATCCCACAGCTTACAAGGCTTTTGTGTCTAAGAACGAAGATCAAGAAATACCAGGTGGTGGAGAAAGTCTTGTTCAACTTTATGATCGCAGCACATCTGCATTGCTTAAAATTGGCTTAAAGCATAAAGGGGAGCGAGTAATTGTTGTCTCTCATGGAGGATTCATCAGAGCCCTTTACAAGTGGGCATGCCCAAATGGTAAGCCTGGGAAGGTACTCAATACATGTGTTAGTGTTTTTCACTTGTACGGTGAGGACAAATGGACCTTAAAAGTGTGGGGTGATGTCAGTCATCTGAACGAAACTGGATTTCTAGAGTCTGGTTTTGGAGGTGATAGAAATTCTGGTTAG

>Glyma.05g080400.4 sequence-type=CDS polypeptide=Glyma.05g080400.4.p locus=Glyma.05g080400 ID=Glyma.05g080400.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCGAATTTGCCATCAACAACAACAACAACGGTTCCCATTCCAGCATTAACAGCCCCCATCCTGATTATGCGGAGATTGTTGTGGTGCGTCATGGCGAAACAGCTTGGAATGCTACTGCAAAAATCCAGGGGCACCTGGATGTTGAATTAAATGAAAATGGAAGACAGCAAGCAGCTGTAGTGGCTGATAGACTATCCAGGGAACCTAAGGCCTCTGTTATATATTCTTCTGACTTGAAACGGGCTTTTGAAACAGCACTGATAGTTGCATCCAAGTGTGGAGGGATCGAGGTTGTCAAGGATTCTGACCTACGGGAGAGACACCTAGGGGATCTTCAAGGCCATGTTTTTCATGAAATAGCAAAAACTAATCCCACAGCTTACAAGGCTTTTGTGTCTAAGAACGAAGATCAAGAAATACCAGGTGGTGGAGAAAGTCTTGTTCAACTTTATGATCGCAGCACATCTGCATTGCTTAAAATTGGCTTAAAGCATAAAGATGTTGTATCTCTTTTCAAAGTCCACTAA

Predicted protein sequences of Glyma.05g080400

Limit To All Plant Sequences

>Glyma.05g080400.1.p sequence-type=predicted peptide transcript=Glyma.05g080400.1 locus=Glyma.05g080400 ID=Glyma.05g080400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAEFAINNNNNGSHSSINSPHPDYAEIVVVRHGETAWNATAKIQPWYVQISLICKQGHLDVELNENGRQQAAVVADRLSREPKASVIYSSDLKRAFETALIVASKCGGIEVVKDSDLRERHLGDLQGHVFHEIAKTNPTAYKAFVSKNEDQEIPGGGESLVQLYDRSTSALLKIGLKHKGERVIVVSHGGFIRALYKWACPNGKPGKVLNTCVSVFHLYGEDKWTLKVWGDVSHLNETGFLESGFGGDRNSG*

>Glyma.05g080400.2.p sequence-type=predicted peptide transcript=Glyma.05g080400.2 locus=Glyma.05g080400 ID=Glyma.05g080400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAEFAINNNNNGSHSSINSPHPDYAEIVVVRHGETAWNATAKIQGHLDVELNENGRQQAAVVADRLSREPKASVIYSSDLKRAFETALIVASKCGGIEVVKDSDLRERHLGDLQGHVFHEIAKTNPTAYKAFVSKNEDQEIPGGGESLVQLYDRSTSALLKIGLKHKGERVIVVSHGGFIRALYKWACPNGKPGKVLNTCVSVFHLYGEDKWTLKVWGDVSHLNETGFLESGFGGDRNSG*

>Glyma.05g080400.3.p sequence-type=predicted peptide transcript=Glyma.05g080400.3 locus=Glyma.05g080400 ID=Glyma.05g080400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAEFAINNNNNGSHSSPHPDYAEIVVVRHGETAWNATAKIQGHLDVELNENGRQQAAVVADRLSREPKASVIYSSDLKRAFETALIVASKCGGIEVVKDSDLRERHLGDLQGHVFHEIAKTNPTAYKAFVSKNEDQEIPGGGESLVQLYDRSTSALLKIGLKHKGERVIVVSHGGFIRALYKWACPNGKPGKVLNTCVSVFHLYGEDKWTLKVWGDVSHLNETGFLESGFGGDRNSG*

>Glyma.05g080400.4.p sequence-type=predicted peptide transcript=Glyma.05g080400.4 locus=Glyma.05g080400 ID=Glyma.05g080400.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAEFAINNNNNGSHSSINSPHPDYAEIVVVRHGETAWNATAKIQGHLDVELNENGRQQAAVVADRLSREPKASVIYSSDLKRAFETALIVASKCGGIEVVKDSDLRERHLGDLQGHVFHEIAKTNPTAYKAFVSKNEDQEIPGGGESLVQLYDRSTSALLKIGLKHKDVVSLFKVH*

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