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Report for Sequence Feature Glyma.05g077100

Feature Type:gene_model
Chromosome:Gm05
Start:9979195
stop:9983846
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.05g077100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G27170.1AT chloride channel B JGI N/AIEA
GO:0006811GO-bp ion transport EnsemblGenomesN/AIEA
GO:0006821GO-bp chloride transport EnsemblGenomesN/AIEA
GO:0006821GO-bp chloride transport JGI N/AIEA
GO:0015706GO-bp nitrate transport EnsemblGenomesN/AIEA
GO:0034220GO-bp ion transmembrane transport EnsemblGenomesN/AIEA
GO:0055085GO-bp transmembrane transport EnsemblGenomesN/AIEA
GO:0055085GO-bp transmembrane transport JGI N/AIEA
GO:1902476GO-bp chloride transmembrane transport EnsemblGenomesN/AIEA
GO:1902600GO-bp proton transmembrane transport EnsemblGenomesN/AIEA
GO:0009705GO-cc plant-type vacuole membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0005216GO-mf ion channel activity EnsemblGenomesN/AIEA
GO:0005247GO-mf voltage-gated chloride channel activity EnsemblGenomesN/AIEA
GO:0005247GO-mf voltage-gated chloride channel activity JGI N/AIEA
GO:0009671GO-mf nitrate:proton symporter activity EnsemblGenomesN/AIEA
GO:0030554GO-mf adenyl nucleotide binding JGI N/AIEA
KOG0474 KOG Cl- channel CLC-7 and related proteins (CLC superfamily) JGI N/AIEA
PTHR11689Panther CHLORIDE CHANNEL JGI N/AIEA
PTHR11689:SF11Panther JGI N/AIEA
PF00571PFAM CBS domain JGI N/AIEA
PF00654PFAM Voltage gated chloride channel JGI N/AIEA

Proteins Associated with Glyma.05g077100
LocusGene SymbolProtein Name
CLC1 chloride channel

Expression Patterns of Glyma.05g077100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.05g077100 not represented in the dataset
Glyma.05g077100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.05g077100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma05g14760 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.05g077100
>Glyma.05g077100.1 sequence-type=CDS polypeptide=Glyma.05g077100.1.p locus=Glyma.05g077100 ID=Glyma.05g077100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTGAGGAATCCAGTTTGCTTAAAGAAAGCACATCAATCAATGACACCAATATGGTGGAAGAGGTTGAAGAAAGGGATCCAGAAAGCAATCCATTGAATGAGCCACTTCTCAAGAGGAACAGGACTTTGTCTTCCAATCCACTTGCTCTTGTTGGAGCAAAAGTTTCCTACATAGAAAGCTTGGACTACGAGATCAATGAGAATGACCTGTTCAAACAAGATTGGAGGAGCAGATCAAGAACTCAAGTGTTGCAATACATATTCTGGAAATGGACTCTGGCATTCCTTGTTGGACTTCTCACTGGTGTCATAGCCACTCTTATCAATCTTGCTGTTGAGAACATTGCCGGGTACAAGTTTCTTGCTGTTGTCAACTTTATCCAAAAAGAAAGGTACTTGAGAGGTTTCCTATATTTCACGGGCATTAATTTCCTTTTGACATTTGTTGCTTCTATTCTGTGTGTGTGTTTTGCACCCACGGCAGCTGGGCCTGGAATACCTGAAATCAAAGCTTATCTTAATGGTGTTGATACTCCCAACATGTATGGTGCCACCACATTGTTTGTTAAGATAATTGGAAGCATTGGAGCTGTATCTGCAGGCCTAGATTTAGGAAAAGAAGGGCCATTGGTACACATTGGAAGCTGCATTGCTTCCTTACTAGGCCAAGGAGGCCCTGACAATTACAGGATCAAGTGGCGCTGGCTACGGTATTTCAACAACGATCGTGACCGTCGCGATCTTATTACTTGTGGTGCTTCTTCAGGGGCACCTGTGGGAGGAGTTCTCTTTGCTCTTGAAGAGGTGGCAACTTGGTGGAGAAGTGCTCTCCTCTGGAGAACATTTTTCAGCACAGCTGTGGTGGTGGTAGTGCTAAGGGCCTCTATTGAACTTTGCCACAAAGGCAAGTGTGGTCTTTTTGGTGAAGGAGGGCTCATCATGTATGATGTGAGCGATGTCACTGTTAGGTACAATGTGATGGATATCATCCCTGTTGTTATCATTGGAGTCCTAGGTGGGGTATTGGGAAGCCTTTACAACTATCTTCTCCATAAGGTCCTCCGTGTCTACAATCTCATCAATCAGAAAGGAAAAATGTACAAGCTCCTCCTCAGTCTTTCAGTTGCAATCTTCACATCAGCGTGCCAATATGGTCTCCCATTCCTAGCAAAATGTACCCCTTGTGATCCATCCCTCTCAGATGTGTGCCCCACCAACGGGCGTTCTGGAAACTTCAAACAATTCAACTGCCCAAAAGGCTACTACAATGATCTTGCTACTCTTCTTCTGACCACCAATGATGATGCTGTTAGAAACATATTCTCAACCAACACCCCTCTTGAATACCAACCCTCCTCCATCATAATTTTCTTTGCACTGTATTGCATACTAGGACTAATCACCTTTGGGATTGCTGTGCCATCAGGGCTCTTCCTCCCCATCATTCTCATGGGTTCCGGCTACGGTCGCCTTCTCGGCATCCTCATGGGGCCTCACACAAACATTGATCAAGGGCTGTTTGCAGTCCTTGGTGCAGCCTCACTCATGGCTGGATCCATGAGAATGACTGTGTCCCTTTGTGTGATCTTCCTTGAACTAACCAACAACCTTCTCCTACTACCAATAACCATGATTGTTCTCCTCATAGCTAAAACTGTTGGAGACAGCTTCAACCCAAGCATCTATGAGATCATATTGCACCTGAAAGGCCTCCCTTTCATGGATGCAAACCCTGAGCCATGGATGAGAAACCTCACTGTGGGTGAGCTTGTTGATGTGAAGCCAGCAGTGGTTAGCTTCAAAGGAGTAGAAAAGGTGGCTAACATAGTCAATGCCTTGAAAAACACTACACATAATGGTTTTCCTGTGATGGATTGTGGGCTGGTGCCAACCACAGGAGTGGCCAATGAGGCTACAGAACTGCACGGAATCATTCTAAGAGCACACCTTATCCAAGTGCTGAAGAAGAAGTGGTTCTTGAAGGAGAGAAGGAGAACTGAGGAATGGGAAGTTAGAGAGAAATTTACATGGGTGGAGCTGGCTGAGAGAGAAGGGAATATTGAAGATGTGGCTGTGACAAAAGAAGAAATGGAGATGTTTGTTGATTTGCATCCTCTCACCAATACTACACCCTTCACAGTGCTAGAGAGTATGTCAGTTGCAAAAGCAATGGTTCTCTTCAGACAAGTAGGACTTCGCCATATGCTTGTTGTGCCAAAGTATCAAGCTTCAGGGGTATCTCCTGTGATTGGGATCCTGACCCGGCAAGATCTACTGGCATACAACATTCTGACAGTGTTTCCTCACCTGGCAAAATCAAAGAGGAAGTGA
Predicted protein sequences of Glyma.05g077100
>Glyma.05g077100.1.p sequence-type=predicted peptide transcript=Glyma.05g077100.1 locus=Glyma.05g077100 ID=Glyma.05g077100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGEESSLLKESTSINDTNMVEEVEERDPESNPLNEPLLKRNRTLSSNPLALVGAKVSYIESLDYEINENDLFKQDWRSRSRTQVLQYIFWKWTLAFLVGLLTGVIATLINLAVENIAGYKFLAVVNFIQKERYLRGFLYFTGINFLLTFVASILCVCFAPTAAGPGIPEIKAYLNGVDTPNMYGATTLFVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIKWRWLRYFNNDRDRRDLITCGASSGAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRASIELCHKGKCGLFGEGGLIMYDVSDVTVRYNVMDIIPVVIIGVLGGVLGSLYNYLLHKVLRVYNLINQKGKMYKLLLSLSVAIFTSACQYGLPFLAKCTPCDPSLSDVCPTNGRSGNFKQFNCPKGYYNDLATLLLTTNDDAVRNIFSTNTPLEYQPSSIIIFFALYCILGLITFGIAVPSGLFLPIILMGSGYGRLLGILMGPHTNIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFMDANPEPWMRNLTVGELVDVKPAVVSFKGVEKVANIVNALKNTTHNGFPVMDCGLVPTTGVANEATELHGIILRAHLIQVLKKKWFLKERRRTEEWEVREKFTWVELAEREGNIEDVAVTKEEMEMFVDLHPLTNTTPFTVLESMSVAKAMVLFRQVGLRHMLVVPKYQASGVSPVIGILTRQDLLAYNILTVFPHLAKSKRK*






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