Glyma.05g073400

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Report for Sequence Feature Glyma.05g073400

Feature Type:	gene_model
Chromosome:	Gm05
Start:	8207878
stop:	8219761
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.05g073400

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G40740.1	AT		JGI	N/A	IEA
GO:0051225	GO-bp	spindle assembly	EnsemblGenomes	N/A	IEA
GO:0070652	GO-cc	HAUS complex	EnsemblGenomes	N/A	IEA

Expression Patterns of Glyma.05g073400

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.05g073400

Paralog	Evidence	Comments
Glyma.19g077600	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.05g073400 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma05g06480	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.05g073400

Limit To All Plant Sequences

>Glyma.05g073400.2 sequence-type=transcript locus=Glyma.05g073400 ID=Glyma.05g073400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAAACCCAAACTTCCCGAAATTCTAAACGCACCCCTACTTTTCAAATTGAGGTGCCGCTCCGCAATTTTGCACAAACCCAGGGACCTCCTTCCCTTCCAAAAATACTCCaagaaaacaaaaaacaaaatcaaaaaacaaaaccacaatTGCACAACACGATAGAGCAGGATCAGAGAGAAGAAAGAAGCAAAAGCAACCGAAACACAGAAGAAACAGAAGCAAAAGAAGAACAAAACAAACCAACGAagaagaagaagaagaaaaagaagaacacggagagagagtgtgtgaaggtgatgacgatggacagagagaaggagagagagatagagctggagagTGCAATGTACACGAATTGCTTGTTGTTGGGTCTGGATCCGGCGATCATCGGAGTCGGAGCCTCCAACGCGACTCCTCGGGTCGGGCATTTCCGTCACTCGAACCCTAAATTGGGGGAACAGCTTCTCTACTTCATCCTTTCCTCTCTCAGAGGCCCAATTCAATCCGCAAAAgatttcgataaggtctggccgattttcgattccgcgcagtcgcgtgattttcgtaagGTTGTTCAGGGGATTATTAGCGAGCTTGAGTCGCAGGGCGCACTTCCGAGGAGCAATTCGAGGGTTTCTTCACTTGCTACGTGCTGTGGACCTAGGTTTGTTGAGCTTCTATGGCAACTTTCTTTGCATGCTTTACGAGAGGTTCATCGACGGACATTTACTGCTGACATATCTTCTAACCCATTGCCTGCGCCATTGACTGATGTAGCCTTCTCACATGCGGCTACTCTACTTCCAGTTACAAAGGCAAGAATAGCGCTTGAAAGAAGAAAGTTTCTTAAAAATGCAGAAATGGCTGTACAGCGGCAGGCTATGTGGTCTAATTTGGCTCATGAAATGACTGCTGAATTTCGTGGTTTATGTGCTGAAGAGGCTTATTTGCAACAAGAATTGGAAAAACTGCATGACTTGAGGAATAAAGTGAAGTTGGAAGGAGAGCTCTGGGATGATCTTGTATCTAGTTCAAGTCAAAATTCCCATTTAGTTTCAAAGGCTACTCGGCTATGGGAGTCTTTATTAGCTCGTAAAAGTCAACATGAAGTTCTTGCATCTGGTCCTATTGAGGACTTGATAGCTCATCGAGAACATAGGTATCGAATCTCTGGATCATCTTTGCTTGCAGCAATGGACCAGAGTTCACAAGCTCCTTATTCAGATGTATTATCTGCTCAGTCTGGGGATTTGCCTGCAATGGATAACAAAGAAGAGAATGATGGATCACATTTCAGCAATGAGACATTGACAAGATTGGATGACAGAACTGGAAGAGCCCACCAAACTGTTGATGTAGCTGAGGTTATACGGCGATGGACCCATGCCTTGCAACGTATCCACAAACAATCACTTCATTTGGCAAAAGCGAATGATGGAGAGGGTCCAGATATATTACGCAGTGCACAGGAAGGTGATTCAAGTGGCCATGCTGAGTCTTTAGCAGCAACCCTTGCAGAGCATCAGCAGCATTTGGCTAGCTTCCAGGTGCTTATTAACCAACTCAAGGATGTTGCTCCAACCATACAGAAGTCCATATCTGAGTGTACAGAAAAGGTTAACTGTATAACCTCCAATTTACCTCCAACGAACAGACCTAATGGTCGGTCAACGTCACCTATCCAGACACAGAGTAGTGGGAGGATGGACAATAGCAATGATGATGTTAGCGATGTGACTTCTAGAATATCTAATATTCAGCTTGACAAGGTTTCTGTTAGTCCTCCCACTTTAAAGCTTCCTCAATTATTTAGCTTGACTCCATCTTCTGGAAAATCTGGAAATGTCCAAAGGCGGCACAATAATGCTCCTCAAACCAGCCAAACAGAGAACCTCTCTGATAGAAAATCACTGGATCCTCCTTCAAATAACGAAGTAGAAAGTTCAGCTGAAGCCCCTCTCTCCGAGACTGAAACGGCCTTGATAGACCATTGAAAATTTTCTGGGCAACCTGCAAGACTTCATTGAAGAATCAGCATTACTGATGTGGTGGATTGCTATTCTTTTGTTGAGATATATACTCCATTAACCTTATATATAACACGATGCTTGTATGATTTATTCTTGTTTGATATATTTTCACCATCTATGACTTTGTTGATGCCCTACTGCTACTGGGAGGAACCATGATGAGTGACCCGTGTTCTTCATTGGTGAATGATGATTTACTTCGGGATGAAGATGCTAAAATCCAAAATGCAAGCCTGTGTTGGATGGTGAAGATAGTTTGTCTTCAACCAACACTTGAATTTACATTCTCATTTTCATCCACTGGTTTGTTATTTTAGTCCAACCATTTTCATCTGCTTAAGTAGACTGACGTCCCAATGGGCCTGTTGAAAACAAATTTGTGGATATAACAAATACAGTTCTGGGCTTTCTCTGCATCCCTCTGGCATCCGTTTTAGTCAGTCATCGTCTATCCTTCGATTGCAATTAATTTATGTATTTTGACAGTTGTGTATCTCATGATCTAGGTCTTGTATCTTCGCAATATATCAGGAATGAAACTCACGTCATTTTATTTTACTGTTTAGTGATATTGTTTTGTTTTTCTTTTCTTAAGCAACACTCCACATGACCGATTAGTGG

Coding sequences of Glyma.05g073400

Limit To All Plant Sequences

>Glyma.05g073400.1 sequence-type=CDS polypeptide=Glyma.05g073400.1.p locus=Glyma.05g073400 ID=Glyma.05g073400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACGATGGACAGAGAGAAGGAGAGAGAGATAGAGCTGGAGAGTGCAATGTACACGAATTGCTTGTTGTTGGGTCTGGATCCGGCGATCATCGGAGTCGGAGCCTCCAACGCGACTCCTCGGGTCGGGCATTTCCGTCACTCGAACCCTAAATTGGGGGAACAGCTTCTCTACTTCATCCTTTCCTCTCTCAGAGGCCCAATTCAATCCGCAAAAGATTTCGATAAGGTCTGGCCGATTTTCGATTCCGCGCAGTCGCGTGATTTTCGTAAGGTTGTTCAGGGGATTATTAGCGAGCTTGAGTCGCAGGGCGCACTTCCGAGGAGCAATTCGAGGGTTTCTTCACTTGCTACGTGCTGTGGACCTAGGTTTGTTGAGCTTCTATGGCAACTTTCTTTGCATGCTTTACGAGAGGTTCATCGACGGACATTTACTGCTGACATATCTTCTAACCCATTGCCTGCGCCATTGACTGATGTAGCCTTCTCACATGCGGCTACTCTACTTCCAGTTACAAAGGCAAGAATAGCGCTTGAAAGAAGAAAGTTTCTTAAAAATGCAGAAATGGCTGTACAGCGGCAGGCTATGTGGTCTAATTTGGCTCATGAAATGACTGCTGAATTTCGTGGTTTATGTGCTGAAGAGGCTTATTTGCAACAAGAATTGGAAAAACTGCATGACTTGAGGAATAAAGTGAAGTTGGAAGGAGAGCTCTGGGATGATCTTGTATCTAGTTCAAGTCAAAATTCCCATTTAGTTTCAAAGGCTACTCGGCTATGGGAGTCTTTATTAGCTCGTAAAAGTCAACATGAAGTTCTTGCATCTGGTCCTATTGAGGACTTGATAGCTCATCGAGAACATAGGTATCGAATCTCTGGATCATCTTTGCTTGCAGCAATGGACCAGAGTTCACAAGCTCCTTATTCAGATGTATTATCTGCTCAGTCTGGGGATTTGCCTGCAATGGATAACAAAGAAGAGAATGATGGATCACATTTCAGCAATGAGACATTGACAAGATTGGATGACAGAACTGGAAGAGCCCACCAAACTGTTGATGTAGCTGAGGTTATACGGCGATGGACCCATGCCTTGCAACGTATCCACAAACAATCACTTCATTTGGCAAAAGCGAATGATGGAGAGGGTCCAGATATATTACGCAGTGCACAGGAAGGTGATTCAAGTGGCCATGCTGAGTCTTTAGCAGCAACCCTTGCAGAGCATCAGCAGCATTTGGCTAGCTTCCAGGTGCTTATTAACCAACTCAAGGATGTTGCTCCAACCATACAGAAGTCCATATCTGAGTGTACAGAAAAGGTTAACTGTATAACCTCCAATTTACCTCCAACGAACAGACCTAATGGTCGGTCAACGTCACCTATCCAGACACAGAGTAGTGGGAGGATGGACAATAGCAATGATGATGTTAGCGATGTGACTTCTAGAATATCTAATATTCAGCTTGACAAGGTTTCTGTTAGTCCTCCCACTTTAAAGCTTCCTCAATTATTTAGCTTGACTCCATCTTCTGGAAAATCTGGAAATGTCCAAAGGCGGCACAATAATGCTCCTCAAACCAGCCAAACAGAGAACCTCTCTGATAGAAAATCACTGGATCCTCCTTCAAATAACGAAGTAGAAAGTTCAGCTGAAGATAGTGATAGTTGCTATGTCCACAATTTGAAGAGGTCGGTAAGAGAAGCAGCACTGTCATTGCGGTCATGTAATTCAGAATCGTCACGGGATAGTCAATCTGATGGAAGTTCTGAGCACTTCTTTGTCCCTCTTTCAGAAACTGGCTTTTCTAATTTAGATGCAGACAAAAGGGGAGCTTCATTAAGGAGCAAAAGATTATTTGTATCCCAAATGGATGATTCTTTGCTTGAGAGTCATGCATCTGGTGGGCATGGGGAGAGCAAGTTTGATGAATTTCCAGATATGTTGAATGATTTGGAAAGGCTTTCTGTCTCTGATTACAACAATGTTAATGGTTTTCTATCATATACTGGTTCAAATTCAACATCTGATGCTCAGCGGTCATTTTTTGACTTTGAGGATTCCCAGGATCAAGTCTTCTCACCACCTTTGCTAATGGACTCATCACTTTTGACAGATCCATTTGAAGACTTGCTGGCCCCTCTCTCCGAGACTGAAACGGCCTTGATAGACCATTGA

>Glyma.05g073400.2 sequence-type=CDS polypeptide=Glyma.05g073400.2.p locus=Glyma.05g073400 ID=Glyma.05g073400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGACGATGGACAGAGAGAAGGAGAGAGAGATAGAGCTGGAGAGTGCAATGTACACGAATTGCTTGTTGTTGGGTCTGGATCCGGCGATCATCGGAGTCGGAGCCTCCAACGCGACTCCTCGGGTCGGGCATTTCCGTCACTCGAACCCTAAATTGGGGGAACAGCTTCTCTACTTCATCCTTTCCTCTCTCAGAGGCCCAATTCAATCCGCAAAAGATTTCGATAAGGTCTGGCCGATTTTCGATTCCGCGCAGTCGCGTGATTTTCGTAAGGTTGTTCAGGGGATTATTAGCGAGCTTGAGTCGCAGGGCGCACTTCCGAGGAGCAATTCGAGGGTTTCTTCACTTGCTACGTGCTGTGGACCTAGGTTTGTTGAGCTTCTATGGCAACTTTCTTTGCATGCTTTACGAGAGGTTCATCGACGGACATTTACTGCTGACATATCTTCTAACCCATTGCCTGCGCCATTGACTGATGTAGCCTTCTCACATGCGGCTACTCTACTTCCAGTTACAAAGGCAAGAATAGCGCTTGAAAGAAGAAAGTTTCTTAAAAATGCAGAAATGGCTGTACAGCGGCAGGCTATGTGGTCTAATTTGGCTCATGAAATGACTGCTGAATTTCGTGGTTTATGTGCTGAAGAGGCTTATTTGCAACAAGAATTGGAAAAACTGCATGACTTGAGGAATAAAGTGAAGTTGGAAGGAGAGCTCTGGGATGATCTTGTATCTAGTTCAAGTCAAAATTCCCATTTAGTTTCAAAGGCTACTCGGCTATGGGAGTCTTTATTAGCTCGTAAAAGTCAACATGAAGTTCTTGCATCTGGTCCTATTGAGGACTTGATAGCTCATCGAGAACATAGGTATCGAATCTCTGGATCATCTTTGCTTGCAGCAATGGACCAGAGTTCACAAGCTCCTTATTCAGATGTATTATCTGCTCAGTCTGGGGATTTGCCTGCAATGGATAACAAAGAAGAGAATGATGGATCACATTTCAGCAATGAGACATTGACAAGATTGGATGACAGAACTGGAAGAGCCCACCAAACTGTTGATGTAGCTGAGGTTATACGGCGATGGACCCATGCCTTGCAACGTATCCACAAACAATCACTTCATTTGGCAAAAGCGAATGATGGAGAGGGTCCAGATATATTACGCAGTGCACAGGAAGGTGATTCAAGTGGCCATGCTGAGTCTTTAGCAGCAACCCTTGCAGAGCATCAGCAGCATTTGGCTAGCTTCCAGGTGCTTATTAACCAACTCAAGGATGTTGCTCCAACCATACAGAAGTCCATATCTGAGTGTACAGAAAAGGTTAACTGTATAACCTCCAATTTACCTCCAACGAACAGACCTAATGGTCGGTCAACGTCACCTATCCAGACACAGAGTAGTGGGAGGATGGACAATAGCAATGATGATGTTAGCGATGTGACTTCTAGAATATCTAATATTCAGCTTGACAAGGTTTCTGTTAGTCCTCCCACTTTAAAGCTTCCTCAATTATTTAGCTTGACTCCATCTTCTGGAAAATCTGGAAATGTCCAAAGGCGGCACAATAATGCTCCTCAAACCAGCCAAACAGAGAACCTCTCTGATAGAAAATCACTGGATCCTCCTTCAAATAACGAAGTAGAAAGTTCAGCTGAAGCCCCTCTCTCCGAGACTGAAACGGCCTTGATAGACCATTGA

Predicted protein sequences of Glyma.05g073400

Limit To All Plant Sequences

>Glyma.05g073400.1.p sequence-type=predicted peptide transcript=Glyma.05g073400.1 locus=Glyma.05g073400 ID=Glyma.05g073400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTMDREKEREIELESAMYTNCLLLGLDPAIIGVGASNATPRVGHFRHSNPKLGEQLLYFILSSLRGPIQSAKDFDKVWPIFDSAQSRDFRKVVQGIISELESQGALPRSNSRVSSLATCCGPRFVELLWQLSLHALREVHRRTFTADISSNPLPAPLTDVAFSHAATLLPVTKARIALERRKFLKNAEMAVQRQAMWSNLAHEMTAEFRGLCAEEAYLQQELEKLHDLRNKVKLEGELWDDLVSSSSQNSHLVSKATRLWESLLARKSQHEVLASGPIEDLIAHREHRYRISGSSLLAAMDQSSQAPYSDVLSAQSGDLPAMDNKEENDGSHFSNETLTRLDDRTGRAHQTVDVAEVIRRWTHALQRIHKQSLHLAKANDGEGPDILRSAQEGDSSGHAESLAATLAEHQQHLASFQVLINQLKDVAPTIQKSISECTEKVNCITSNLPPTNRPNGRSTSPIQTQSSGRMDNSNDDVSDVTSRISNIQLDKVSVSPPTLKLPQLFSLTPSSGKSGNVQRRHNNAPQTSQTENLSDRKSLDPPSNNEVESSAEDSDSCYVHNLKRSVREAALSLRSCNSESSRDSQSDGSSEHFFVPLSETGFSNLDADKRGASLRSKRLFVSQMDDSLLESHASGGHGESKFDEFPDMLNDLERLSVSDYNNVNGFLSYTGSNSTSDAQRSFFDFEDSQDQVFSPPLLMDSSLLTDPFEDLLAPLSETETALIDH*

>Glyma.05g073400.2.p sequence-type=predicted peptide transcript=Glyma.05g073400.2 locus=Glyma.05g073400 ID=Glyma.05g073400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MTMDREKEREIELESAMYTNCLLLGLDPAIIGVGASNATPRVGHFRHSNPKLGEQLLYFILSSLRGPIQSAKDFDKVWPIFDSAQSRDFRKVVQGIISELESQGALPRSNSRVSSLATCCGPRFVELLWQLSLHALREVHRRTFTADISSNPLPAPLTDVAFSHAATLLPVTKARIALERRKFLKNAEMAVQRQAMWSNLAHEMTAEFRGLCAEEAYLQQELEKLHDLRNKVKLEGELWDDLVSSSSQNSHLVSKATRLWESLLARKSQHEVLASGPIEDLIAHREHRYRISGSSLLAAMDQSSQAPYSDVLSAQSGDLPAMDNKEENDGSHFSNETLTRLDDRTGRAHQTVDVAEVIRRWTHALQRIHKQSLHLAKANDGEGPDILRSAQEGDSSGHAESLAATLAEHQQHLASFQVLINQLKDVAPTIQKSISECTEKVNCITSNLPPTNRPNGRSTSPIQTQSSGRMDNSNDDVSDVTSRISNIQLDKVSVSPPTLKLPQLFSLTPSSGKSGNVQRRHNNAPQTSQTENLSDRKSLDPPSNNEVESSAEAPLSETETALIDH*

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