SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.05g061100

Feature Type:gene_model
Chromosome:Gm05
Start:5830886
stop:5832940
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.05g061100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G78570.1AT ATRHM1,RHM1,ROL1 JGI N/AIEA
PTHR10366PantherFam NAD DEPENDENT EPIMERASE/DEHYDRATASE JGI N/AIEA
PTHR10366:SF405PantherFam BIFUNCTIONAL DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE/DTDP-4-DEHYDRORHAMNOSE REDUCTASE JGI N/AIEA
PF04321Pfam RmlD substrate binding domain JGI N/AIEA

Gene model name correspondences to Glyma.05g061100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments


Coding sequences of Glyma.05g061100
>Glyma.05g061100.3 sequence-type=CDS polypeptide=Glyma.05g061100.3.p locus=Glyma.05g061100 id=Glyma.05g061100.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATTGGTATATCAACAACCCTAATTGGTGGGGTGATGTCACTGGGGCATTGCTTCCTCATCCTAGGATGCTGATGATGCCTGGCGGGTTGGAGAGTCATTTCGAGGGATCTGAAGAGGAAAAACCTGCATCTTTTGGCTCAAGTAATACCAGGATGGTGGTTCCATCATCCAAGAACACCAGCTCTCAACAGAAACATCCTTTTATGTTCTTGATCTATGGTAGAACAGGGTGGATTGGGGGTTTGCTGGGGAAATTGTGTGAAAAGCAAGGAATTCCGTATGAATATGGAAAGGGTCGCCTGGAGGACCGCTCCTCACTCTTGGCTAATCTTCAGAATGTGAAGCCTACACATGTTATTAATGCTGCAGGAGTGACCGGCAGACCCAATGTTGATTGGTGTGAATCCCATAAAACAGAAACCATCCGCACCAATGTTGCTGGTACCTTAACAATGGCTGATGTCTGCAGAGAGCATGGGATCTTGATGATAAATTATGCTACTGGGTGCATATTCGAGTATAATGCAACACATCCTGAGGGCTCTGGCATTGGTTTTAAGGAGGAAGCAAGCCCAATTTCATTGGCTCTTTCTATTCCAAAACTAAAGCTATGGTTGAGGAGCTCTTGA
Predicted protein sequences of Glyma.05g061100
>Glyma.05g061100.3.p sequence-type=predicted peptide transcript=Glyma.05g061100.3 locus=Glyma.05g061100 id=Glyma.05g061100.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDWYINNPNWWGDVTGALLPHPRMLMMPGGLESHFEGSEEEKPASFGSSNTRMVVPSSKNTSSQQKHPFMFLIYGRTGWIGGLLGKLCEKQGIPYEYGKGRLEDRSSLLANLQNVKPTHVINAAGVTGRPNVDWCESHKTETIRTNVAGTLTMADVCREHGILMINYATGCIFEYNATHPEGSGIGFKEEASPISLALSIPKLKLWLRSS*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo